Evolutionary history of a widespread Indo-Pacific goby: The role of Pleistocene sea-level changes on demographic contraction/expansion dynamics

2012 ◽  
Vol 62 (1) ◽  
pp. 566-572 ◽  
Author(s):  
Thierry Bernard Hoareau ◽  
Emilie Boissin ◽  
Patrick Berrebi
2018 ◽  
Vol 41 ◽  
Author(s):  
Kevin Arceneaux

AbstractIntuitions guide decision-making, and looking to the evolutionary history of humans illuminates why some behavioral responses are more intuitive than others. Yet a place remains for cognitive processes to second-guess intuitive responses – that is, to be reflective – and individual differences abound in automatic, intuitive processing as well.


2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Christophe Duplais ◽  
Vincent Sarou-Kanian ◽  
Dominique Massiot ◽  
Alia Hassan ◽  
Barbara Perrone ◽  
...  

AbstractAcross the evolutionary history of insects, the shift from nitrogen-rich carnivore/omnivore diets to nitrogen-poor herbivorous diets was made possible through symbiosis with microbes. The herbivorous turtle ants Cephalotes possess a conserved gut microbiome which enriches the nutrient composition by recycling nitrogen-rich metabolic waste to increase the production of amino acids. This enrichment is assumed to benefit the host, but we do not know to what extent. To gain insights into nitrogen assimilation in the ant cuticle we use gut bacterial manipulation, 15N isotopic enrichment, isotope-ratio mass spectrometry, and 15N nuclear magnetic resonance spectroscopy to demonstrate that gut bacteria contribute to the formation of proteins, catecholamine cross-linkers, and chitin in the cuticle. This study identifies the cuticular components which are nitrogen-enriched by gut bacteria, highlighting the role of symbionts in insect evolution, and provides a framework for understanding the nitrogen flow from nutrients through bacteria into the insect cuticle.


Science ◽  
2021 ◽  
Vol 373 (6551) ◽  
pp. 226-231 ◽  
Author(s):  
Yasuka Toda ◽  
Meng-Ching Ko ◽  
Qiaoyi Liang ◽  
Eliot T. Miller ◽  
Alejandro Rico-Guevara ◽  
...  

Early events in the evolutionary history of a clade can shape the sensory systems of descendant lineages. Although the avian ancestor may not have had a sweet receptor, the widespread incidence of nectar-feeding birds suggests multiple acquisitions of sugar detection. In this study, we identify a single early sensory shift of the umami receptor (the T1R1-T1R3 heterodimer) that conferred sweet-sensing abilities in songbirds, a large evolutionary radiation containing nearly half of all living birds. We demonstrate sugar responses across species with diverse diets, uncover critical sites underlying carbohydrate detection, and identify the molecular basis of sensory convergence between songbirds and nectar-specialist hummingbirds. This early shift shaped the sensory biology of an entire radiation, emphasizing the role of contingency and providing an example of the genetic basis of convergence in avian evolution.


2021 ◽  
Author(s):  
Keerthic Aswin ◽  
Srinivasan Ramachandran ◽  
Vivek T Natarajan

AbstractEvolutionary history of coronaviruses holds the key to understand mutational behavior and prepare for possible future outbreaks. By performing comparative genome analysis of nidovirales that contain the family of coronaviruses, we traced the origin of proofreading, surprisingly to the eukaryotic antiviral component ZNFX1. This common recent ancestor contributes two zinc finger (ZnF) motifs that are unique to viral exonuclease, segregating them from DNA proof-readers. Phylogenetic analyses indicate that following acquisition, genomes of coronaviruses retained and further fine-tuned proofreading exonuclease, whereas related families harbor substitution of key residues in ZnF1 motif concomitant to a reduction in their genome sizes. Structural modelling followed by simulation suggests the role of ZnF in RNA binding. Key ZnF residues strongly coevolve with replicase, and the helicase involved in duplex RNA unwinding. Hence, fidelity of replication in coronaviruses is a result of convergent evolution, that enables maintenance of genome stability akin to cellular proofreading systems.


Author(s):  
Jan Zalasiewicz

In almost everybody’s natural lifetime, the sea is one of the great unchanging certainties of life. There is land; there is sea; and in between is that magical place, the seaside, which is sometimes knocked about a bit by the waves, but always manages to recover for that next idyllic summer. There are, one remembers, those faintly disquieting legends, about a remarkably well-organized and ecologically aware person called Noah, and about a Deluge. But these, of course, should not be taken seriously. They were a jumpy and superstitious lot, our ancestors, always prone to making up scary stories. It was a good way to keep the children in order. With a longer perspective, things seem a little different. Take any one location on the globe, for instance. Track it over millions of years. At that one location, there may be a change from deep ocean, to shallow sea, to a shoreline, and thence to terrestrial swamps and flood plains. And then, perhaps, to the absence of evidence, a horizon of absolutely no thickness at all within a succession of rock strata, in which a million years or a hundred million years—or more—may be missing, entirely unrecorded. It is that phenomenon called an unconformity, all that is left of the history of a terrestrial landscape pushed up into the erosional realm. On that eroding landscape, there may have been episodes of battle, murder, and sudden death among armoured saurians, of fire, flood, and storm, and of the humdrum day-to-day life of the vast vegetarian dinosaurs, chewing through their daily hundredweights of plants. Of this, no trace can persist. Only when that landscape is plunged again towards sea level, and begins to be silted up, can a tangible geological record resume. The Earth’s crust, as we have seen, is malleable, can be pushed downwards or thrust upwards by the forces that drive the continents across the face of the globe. Many of the sea level changes that can be read in the strata of the archives are of this sort, and mark purely local ups and downs of individual sections of crust, with no evidence that global sea level was anything other than constant.


Zootaxa ◽  
2019 ◽  
Vol 4613 (1) ◽  
pp. 161-171
Author(s):  
ANDREW P. AMEY ◽  
PATRICK J. COUPER ◽  
JESSICA WORTHINGTON WILMER

A species of the skink genus Lerista is described from Cape York Peninsula in Queensland.  The species is biogeographically interesting as it appears to be separated by at least 500 km from its nearest relatives, members of the Lerista allanae clade.  The role of Pleistocene sea level changes altering availability of suitable habitat for these sand specialists is discussed as a possible driver of isolation and speciation. 


2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Jouko Rikkinen ◽  
David A. Grimaldi ◽  
Alexander R. Schmidt

AbstractMyxomycetes constitute a group within the Amoebozoa well known for their motile plasmodia and morphologically complex fruiting bodies. One obstacle hindering studies of myxomycete evolution is that their fossils are exceedingly rare, so evolutionary analyses of this supposedly ancient lineage of amoebozoans are restricted to extant taxa. Molecular data have significantly advanced myxomycete systematics, but the evolutionary history of individual lineages and their ecological adaptations remain unknown. Here, we report exquisitely preserved myxomycete sporocarps in amber from Myanmar, ca. 100 million years old, one of the few fossil myxomycetes, and the only definitive Mesozoic one. Six densely-arranged stalked sporocarps were engulfed in tree resin while young, with almost the entire spore mass still inside the sporotheca. All morphological features are indistinguishable from those of the modern, cosmopolitan genus Stemonitis, demonstrating that sporocarp morphology has been static since at least the mid-Cretaceous. The ability of myxomycetes to develop into dormant stages, which can last years, may account for the phenotypic stasis between living Stemonitis species and this fossil one, similar to the situation found in other organisms that have cryptobiosis. We also interpret Stemonitis morphological stasis as evidence of strong environmental selection favouring the maintenance of adaptations that promote wind dispersal.


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