scholarly journals Pleistocene allopatric differentiation followed by recent range expansion explains the distribution and molecular diversity of two congeneric crustacean species in the Palaearctic

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Dunja Lukić ◽  
Tom Pinceel ◽  
Federico Marrone ◽  
Monika Mioduchowska ◽  
Csaba F. Vad ◽  
...  
Keyword(s):  
Glacial Refugia ◽  
Temporary Ponds ◽  
Secondary Contact ◽  
Glacial Cycles ◽  
Long Distance ◽  
Mitochondrial Coi ◽  
Postglacial Recolonization ◽  
History Of ◽  
Suitable Habitats ◽  
Glacial Periods

AbstractPleistocene glaciations had a tremendous impact on the biota across the Palaearctic, resulting in strong phylogeographic signals of range contraction and rapid postglacial recolonization of the deglaciated areas. Here, we explore the diversity patterns and history of two sibling species of passively dispersing taxa typical of temporary ponds, fairy shrimps (Anostraca). We combine mitochondrial (COI) and nuclear (ITS2 and 18S) markers to conduct a range-wide phylogeographic study including 56 populations of Branchinecta ferox and Branchinecta orientalis in the Palaearctic. Specifically, we investigate whether their largely overlapping ranges in Europe resulted from allopatric differentiation in separate glacial refugia followed by a secondary contact and reconstruct their postglacial recolonization from the inhabited refugia. Our results suggest the existence of distinct refugia for the two species, with genetic divergence among intraspecific lineages consistent with late Pleistocene glacial cycles. While B. ferox lineages originated from Mediterranean refugia, the origin of B. orientalis lineages was possibly located on the Pannonian Plain. We showed that most dispersal events predominantly happened within 100 km, coupled with several recent long-distance events (> 1000 km). Hence the regional habitat density of suitable habitats in Central Europe is possibly a key to the co-existence of the two species. Overall, our study illustrates how isolation in combination with stochastic effects linked to glacial periods are important drivers of the allopatric differentiation of Palaearctic taxa.

scholarly journals Moose genomes reveal past glacial demography and the origin of modern lineages

BMC Genomics ◽  
2020 ◽  
Vol 21 (1) ◽  
Author(s):  
Nicolas Dussex ◽  
Federica Alberti ◽  
Matti T. Heino ◽  
Remi-Andre Olsen ◽  
Tom van der Valk ◽  
...  
Keyword(s):  
North America ◽  
De Novo ◽  
Demographic History ◽  
Glacial Refugia ◽  
Population Declines ◽  
Glacial Cycles ◽  
Climate Fluctuations ◽  
Northern Latitudes ◽  
Genomic Studies ◽  
History Of

Abstract Background Numerous megafauna species from northern latitudes went extinct during the Pleistocene/Holocene transition as a result of climate-induced habitat changes. However, several ungulate species managed to successfully track their habitats during this period to eventually flourish and recolonise the holarctic regions. So far, the genomic impacts of these climate fluctuations on ungulates from high latitudes have been little explored. Here, we assemble a de-novo genome for the European moose (Alces alces) and analyse it together with re-sequenced nuclear genomes and ancient and modern mitogenomes from across the moose range in Eurasia and North America. Results We found that moose demographic history was greatly influenced by glacial cycles, with demographic responses to the Pleistocene/Holocene transition similar to other temperate ungulates. Our results further support that modern moose lineages trace their origin back to populations that inhabited distinct glacial refugia during the Last Glacial Maximum (LGM). Finally, we found that present day moose in Europe and North America show low to moderate inbreeding levels resulting from post-glacial bottlenecks and founder effects, but no evidence for recent inbreeding resulting from human-induced population declines. Conclusions Taken together, our results highlight the dynamic recent evolutionary history of the moose and provide an important resource for further genomic studies.

Phylogeography and postglacial dispersal of lake trout (Salvelinus namaycush) in North America

1998 ◽  
Vol 55 (4) ◽  
pp. 1010-1024 ◽  
Author(s):  
Christopher C Wilson ◽  
Paul DN Hebert
Keyword(s):  
Lake Trout ◽  
Restriction Enzymes ◽  
Glacial Refugia ◽  
Salvelinus Namaycush ◽  
Secondary Contact ◽  
Freshwater Species ◽  
Long Distance ◽  
Proglacial Lakes ◽  
Mtdna Lineages ◽  
Mtdna Diversity

We used restriction fragment length polymorphism (RFLP) analysis of mitochondrial DNA (mtDNA) diversity to assess the complex postglacial history of lake trout (Salvelinus namaycush) and test existing dispersal hypotheses. A pilot survey with 30 restriction enzymes was carried out on lake trout from 16 geographically representative populations to determine phylogenetically informative characters. Subsequent screening of 1416 lake trout from 93 populations across the species' range with nine variable restriction enzymes showed that lake trout from at least five glacial refugia contributed to extant populations. Three major mtDNA lineages were observed, with sufficient differences to suggest their divergence during the mid-Pleistocene. Geographic and genetic differences within two lineages suggested further vicariant divergence caused by Wisconsinan glacial advances. In contrast with more southern freshwater species, no correlation was observed between the geographic proximity of glacial refugia and relatedness of mtDNA lineages. Current distributions of refugial lineages are readily explained by consideration of timing and connections of proglacial lakes. These lakes facilitated large-scale dispersal from multiple refugia, particularly enabling long-distance dispersal from the Mississippian and northwestern refugia. Proglacial lakes also enabled extensive secondary contact among refugial groups, resulting in high levels of intrapopulation mtDNA diversity within their former boundaries.

scholarly journals Genetic diversification in the East Himalayas as revealed by comparative phylogeography of the black-throated bushtit and Elliot’s laughing thrush

2015 ◽  
Vol 61 (5) ◽  
pp. 935-942 ◽  
Author(s):  
Qing Quan ◽  
Yanhua Qu ◽  
Fumin Lei
Keyword(s):  
Genetic Diversity ◽  
Ecological Niche Modeling ◽  
Glacial Cycles ◽  
Comparative Phylogeography ◽  
High Genetic Diversity ◽  
Climatic Fluctuations ◽  
Genetic Lineages ◽  
The North ◽  
Suitable Habitats ◽  
Glacial Periods

Abstract The Southwest Mountainous region of the eastern Himalayas is a hotspot with extraordinarily high biodiversity and endemism, but the processes that have driven this unique diversity are largely unknown. We evaluated processes that have contributed to the current observed high genetic diversity in this region by integrating comparative phylogeography with ecological niche modeling in a study of two representative birds of the Southwest Mountains: the black-throated bushtit Aegithalos concinnus and the Elliot’s laughing thrush Garrulax elliotii. Mitochondrial DNA analyses revealed multiple divergent genetic lineages, which are roughly congruent with the north, south and east eco-subregion division of the Southwest Mountains. This strong geographical structure in these two species suggests that lineage diversification has proceeded in situ between the eco-subregions of the Southwest Mountains. During Pleistocene glaciations, the two species responded differently to climatic fluctuations. A. con-cinnus maintained rather stable habitats, mostly evergreen forests, during glacial cycles and thus kept a stable population size and further accumulated genetic diversity. In contrast, G. elliotii, which is mostly active in shrublands, has shifted its suitable habitats with glacial cycles. This species dispersed to low elevation areas during glacial periods, which provided multiple opportunities for gene admixture. The admixture causes the mixing of previously isolated genetic lineages and thus obscures the pattern of genetic variation.

Religious Norms, Human Capital, and Money Lending in Jewish European History

2011 ◽  
pp. 56-80 ◽  
Author(s):  
Maristella Botticini ◽  
Zvi Eckstein
Keyword(s):  
Human Capital ◽  
Jewish History ◽  
Southern Italy ◽  
European History ◽  
Long Distance ◽  
Common View ◽  
Jewish Diaspora ◽  
Medieval Europe ◽  
History Of ◽  
Muslim Spain

Circa 1000, the main occupations of the large Jewish community in Muslim Spain and of the small Jewish communities in southern Italy, France, and Germany were local trade and long-distance commerce, as well as handicrafts. A common view states that the usury ban on Christians segregated European Jews into money lending. A similar view contends that the Jews were forced to become money lenders because they were not permitted to own land, and therefore, they were banned from farming. This article offers an alternative argument which is consistent with the main features that mark the history of the Jews: the Jews in medieval Europe voluntarily selected themselves into money lending because they had the key assets for being successful players in credit markets. After providing an overview of Jewish history during 70–1492, it discusses religious norms and human capital in Jewish European history, Jews in the Talmud era, the massive transition of the Jews from farming to crafts and trade, the golden age of the Jewish diaspora (ca. 800–ca. 1250), and the legacy of Judaism.

COMBINING ORAL TRADITIONS AND BAYESIAN CHRONOLOGICAL MODELING TO UNDERSTAND VILLAGE DEVELOPMENT IN THE GULF OF PAPUA (PAPUA NEW GUINEA)

Radiocarbon ◽  
2021 ◽  
pp. 1-21
Author(s):  
Chris Urwin ◽  
Quan Hua ◽  
Henry Arifeae
Keyword(s):  
Papua New Guinea ◽  
New Guinea ◽  
Oral Traditions ◽  
Long Distance ◽  
Spatial History ◽  
The Past ◽  
History Of ◽  
Gulf Of Papua ◽  
The Village

ABSTRACT When European colonists arrived in the late 19th century, large villages dotted the coastline of the Gulf of Papua (southern Papua New Guinea). These central places sustained long-distance exchange and decade-spanning ceremonial cycles. Besides ethnohistoric records, little is known of the villages’ antiquity, spatiality, or development. Here we combine oral traditional and 14C chronological evidence to investigate the spatial history of two ancestral village sites in Orokolo Bay: Popo and Mirimua Mapoe. A Bayesian model composed of 35 14C assays from seven excavations, alongside the oral traditional accounts, demonstrates that people lived at Popo from 765–575 cal BP until 220–40 cal BP, at which time they moved southwards to Mirimua Mapoe. The village of Popo spanned ca. 34 ha and was composed of various estates, each occupied by a different tribe. Through time, the inhabitants of Popo transformed (e.g., expanded, contracted, and shifted) the village to manage social and ceremonial priorities, long-distance exchange opportunities and changing marine environments. Ours is a crucial case study of how oral traditional ways of understanding the past interrelate with the information generated by Bayesian 14C analyses. We conclude by reflecting on the limitations, strengths, and uncertainties inherent to these forms of chronological knowledge.

scholarly journals Great flights by great snipes: long and fast non-stop migration over benign habitats

2011 ◽  
Vol 7 (6) ◽  
pp. 833-835 ◽  
Author(s):  
Raymond H. G. Klaassen ◽  
Thomas Alerstam ◽  
Peter Carlsson ◽  
James W. Fox ◽  
Åke Lindström
Keyword(s):  
Migratory Birds ◽  
Strenuous Exercise ◽  
Migration Route ◽  
Long Distance ◽  
Migration Strategy ◽  
Ice Caps ◽  
Fuel Loads ◽  
Stopover Sites ◽  
Ecological Barriers ◽  
Suitable Habitats

Migratory land birds perform extreme endurance flights when crossing ecological barriers, such as deserts, oceans and ice-caps. When travelling over benign areas, birds are expected to migrate by shorter flight steps, since carrying the heavy fuel loads needed for long non-stop flights comes at considerable cost. Here, we show that great snipes Gallinago media made long and fast non-stop flights (4300–6800 km in 48–96 h), not only over deserts and seas but also over wide areas of suitable habitats, which represents a previously unknown migration strategy among land birds. Furthermore, the great snipes achieved very high ground speeds (15–27 m s −1 ), which was not an effect of strong tailwind support, and we know of no other animal that travels this rapidly over such a long distance. Our results demonstrate that some migratory birds are prepared to accept extreme costs of strenuous exercise and large fuel loads, even when stopover sites are available along the route and there is little tailwind assistance. A strategy of storing a lot of energy before departure, even if migration is over benign habitats, may be advantageous owing to differential conditions of fuel deposition, predation or infection risk along the migration route.

scholarly journals The Evolutionary History, Diversity, and Ecology of Willows (Salix L.) in the European Alps

Diversity ◽  
2021 ◽  
Vol 13 (4) ◽  
pp. 146
Author(s):  
Natascha D. Wagner ◽  
Li He ◽  
Elvira Hörandl
Keyword(s):  
Habitat Preferences ◽  
Introgressive Hybridization ◽  
Ecological Factors ◽  
The Arctic ◽  
Secondary Contact ◽  
European Alps ◽  
Climatic Fluctuations ◽  
History Of ◽  
European Mountain ◽  
The Alps

The genus Salix (willows), with 33 species, represents the most diverse genus of woody plants in the European Alps. Many species dominate subalpine and alpine types of vegetation. Despite a long history of research on willows, the evolutionary and ecological factors for this species richness are poorly known. Here we will review recent progress in research on phylogenetic relationships, evolution, ecology, and speciation in alpine willows. Phylogenomic reconstructions suggest multiple colonization of the Alps, probably from the late Miocene onward, and reject hypotheses of a single radiation. Relatives occur in the Arctic and in temperate Eurasia. Most species are widespread in the European mountain systems or in the European lowlands. Within the Alps, species differ ecologically according to different elevational zones and habitat preferences. Homoploid hybridization is a frequent process in willows and happens mostly after climatic fluctuations and secondary contact. Breakdown of the ecological crossing barriers of species is followed by introgressive hybridization. Polyploidy is an important speciation mechanism, as 40% of species are polyploid, including the four endemic species of the Alps. Phylogenomic data suggest an allopolyploid origin for all taxa analyzed so far. Further studies are needed to specifically analyze biogeographical history, character evolution, and genome evolution of polyploids.

scholarly journals Patterns of millennial variability over the last 500 ka

2010 ◽  
Vol 6 (3) ◽  
pp. 295-303 ◽  
Author(s):  
M. Siddall ◽  
E. J. Rohling ◽  
T. Blunier ◽  
R. Spahni
Keyword(s):  
Atmospheric Circulation ◽  
North Atlantic ◽  
Glacial Cycles ◽  
The North ◽  
The North Atlantic ◽  
Paleoclimate Records ◽  
Temperature Proxy ◽  
Freshwater Release ◽  
Glacial Periods ◽  
Climate Events

Abstract. Millennial variability is a robust feature of many paleoclimate records, at least throughout the last several glacial cycles. Here we use the mean signal from Antarctic climate events 1 to 4 to probe the EPICA Dome C temperature proxy reconstruction through the last 500 ka for similar millennial-scale events. We find that clusters of millennial events occurred in a regular fashion over half of the time during this with a mean recurrence interval of 21 kyr. We find that there is no consistent link between ice-rafted debris deposition and millennial variability. Instead we speculate that changes in the zonality of atmospheric circulation over the North Atlantic form a viable alternative to freshwater release from icebergs as a trigger for millennial variability. We suggest that millennial changes in the zonality of atmospheric circulation over the North Atlantic are linked to precession via sea-ice feedbacks and that this relationship is modified by the presence of the large, Northern Hemisphere ice sheets during glacial periods.

scholarly journals Systematic placement of an enigmatic Southeast Asian taxon Eupetes macrocerus and implications for the biogeography of a main songbird radiation, the Passerida

2007 ◽  
Vol 3 (3) ◽  
pp. 323-326 ◽  
Author(s):  
Knud A Jønsson ◽  
Jon Fjeldså ◽  
Per G.P Ericson ◽  
Martin Irestedt
Keyword(s):  
South African ◽  
Plate Tectonics ◽  
Molecular Data ◽  
Sister Taxon ◽  
Long Distance ◽  
Biogeographic History ◽  
Basal Group ◽  
History Of ◽  
Biogeographic Regions ◽  
Wallace’S Line

Biogeographic connections between Australia and other continents are still poorly understood although the plate tectonics of the Indo-Pacific region is now well described. Eupetes macrocerus is an enigmatic taxon distributed in a small area on the Malay Peninsula and on Sumatra and Borneo. It has generally been associated with Ptilorrhoa in New Guinea on the other side of Wallace's Line, but a relationship with the West African Picathartes has also been suggested. Using three nuclear markers, we demonstrate that Eupetes is the sister taxon of the South African genus Chaetops , and their sister taxon in turn being Picathartes , with a divergence in the Eocene. Thus, this clade is distributed in remote corners of Africa and Asia, which makes the biogeographic history of these birds very intriguing. The most parsimonious explanation would be that they represent a relictual basal group in the Passerida clade established after a long-distance dispersal from the Australo-Papuan region to Africa. Many earlier taxonomic arrangements may have been based on assumptions about relationships with similar-looking forms in the same, or adjacent, biogeographic regions, and revisions with molecular data may uncover such cases of neglect of ancient relictual patterns reflecting past connections between the continents.

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