scholarly journals Effect of plot size and plant spatial arrangement on the efficiency of family selection in sugarcane

2021 ◽  
Vol 53 (2) ◽  
pp. 1-10
Author(s):  
Aparecido De Moraes ◽  
Matheus Henrique Silveira Mendes ◽  
Mauro Sérgio de Oliveira Leite ◽  
Regis De Castro Carvalho ◽  
Flávia Maria Avelar Gonçalves

The purpose of this study was to identify the ideal sample size representing a family in its potential, to identify superior families and, in parallel, determine in which spatial arrangement they may have a better accuracy in the selection of new varieties of sugarcane. For such purpose, five families of full-sibs were evaluated, each with 360 individuals, in the randomized blocks design, with three replications in three different spacing among plants in the row (50 cm, 75 cm, and 100 cm) and 150 cm between the rows. To determine the ideal sample size, as well as the better spacing for evaluation, the bootstrap method was adopted. It was observed that 100 cm spacings provided the best average for the stalk numbers, stalk diameter and for estimated weight of stalks in the stool. The spacing of 75 cm between the plants allowed a better power of discrimination among the families for all characters evaluated. At this 75 cm spacing  was also possible to identify superior families with a sample of 30 plants each plot and 3 reps in the trial. Highlights The bootstrap method was efficient to determine the ideal sample size, as well as the best spacing for evaluation. The 75-cm spacing had the highest power of discrimination among families, indicating that this spacing is the most efficient in evaluating sugarcane families for selection purposes. From all the results and considering selective accuracy as the guiding parameter for decision making, the highest values obtained considering the number of stalks and weight of stalks in the stools were found at the 75-cm spacing.

2013 ◽  
Vol 5 (4) ◽  
pp. 237-241
Author(s):  
Henry De-Graft Acquah

This paper introduces and applies the bootstrap method to compare the power of the test for asymmetry in the Granger and Lee (1989) and Von Cramon-Taubadel and Loy (1996) models. The results of the bootstrap simulations indicate that the power of the test for asymmetry depends on various conditions such as the bootstrap sample size, model complexity, difference in adjustment speeds and the amount of noise in the data generating process used in the application. The true model achieves greater power when compared with the complex model. With small bootstrap sample size or large noise, both models display low power in rejecting the (false) null hypothesis of symmetry.


2020 ◽  
Author(s):  
Kiyoshi Kubota ◽  
Masao Iwagami ◽  
Takuhiro Yamaguchi

Abstract Background:We propose and evaluate the approximation formulae for the 95% confidence intervals (CIs) of the sensitivity and specificity and a formula to estimate sample size in a validation study with stratified sampling where positive samples satisfying the outcome definition and negative samples that do not are selected with different extraction fractions. Methods:We used the delta method to derive the approximation formulae for estimating the sensitivity and specificity and their CIs. From those formulae, we derived the formula to estimate the size of negative samples required to achieve the intended precision and the formula to estimate the precision for a negative sample size arbitrarily selected by the investigator. We conducted simulation studies in a population where 4% were outcome definition positive, the positive predictive value (PPV)=0.8, and the negative predictive value (NPV)=0.96, 0.98 and 0.99. The size of negative samples, n0, was either selected to make the 95% CI fall within ± 0.1, 0.15 and 0.2 or set arbitrarily as 150, 300 and 600. We assumed a binomial distribution for the positive and negative samples. The coverage of the 95% CIs of the sensitivity and specificity was calculated as the proportion of CIs including the sensitivity and specificity in the population, respectively. For selected studies, the coverage was also estimated by the bootstrap method. The sample size was evaluated by examining whether the observed precision was within the pre-specified value.Results:For the sensitivity, the coverage of the approximated 95% CIs was larger than 0.95 in most studies but in 9 of 18 selected studies derived by the bootstrap method. For the specificity, the coverage of the approximated 95% CIs was approximately 0.93 in most studies, but the coverage was more than 0.95 in all 18 studies derived by the bootstrap method. The calculated size of negative samples yielded precisions within the pre-specified values in most of the studies.Conclusion:The approximation formulae for the 95% CIs of the sensitivity and specificity for stratified validation studies are presented. These formulae will help in conducting and analysing validation studies with stratified sampling.


Author(s):  
J. I. Udobi ◽  
G. A. Osuji ◽  
S. I. Onyeagu ◽  
H. O. Obiora-Ilouno

This work estimated the standard error of the maximum likelihood estimator (MLE) and the robust estimators of the exponential mixture parameter (θ) using the influence function and the bootstrap approaches. Mixture exponential random samples of sizes 10, 15, 20, 25, 50, and 100 were generated using 3 mixture exponential models at 2%, 5% and 10% contamination levels. The selected estimators namely: mean, median, alpha-trimmed mean, Huber M-estimate and their standard errors (Tn ) were estimated using the two approaches at the indicated sample sizes and contamination levels. The results were compared using the coefficient of variation, confidence interval and the asymptotic relative efficiency of Tn in order to find out which approach yields the more reliable, precise and efficient estimate of Tn. The results of the analysis show that the two approaches do not equally perform at all conditions. From the results, the bootstrap method was found to be more reliable and efficient method of estimating the standard error of the arithmetic mean at all sample sizes and contamination levels. In estimating the standard error of the median, the influence function method was found to be more effective especially when the sample size is small and yet contamination is high. The influence function based approach yielded more reliable, precise and efficient estimates of the standard errors of the alpha-trimmed mean and the Huber M-estimate for all sample sizes and levels of contamination although the reliability of the bootstrap method improved better as sample size increased to 50 and above. All simulations and analysis were carried out in R programming language.


Author(s):  
Wen Luo ◽  
Hok Chio Lai

Multilevel modeling is often used to analyze survey data collected with a multistage sampling design. When the selection is informative, sampling weights need to be incorporated in the estimation. We propose a weighted residual bootstrap method as an alternative to the multilevel pseudo-maximum likelihood (MPML) estimators. In a Monte Carlo simulation using two-level linear mixed effects models, the bootstrap method showed advantages over MPML for the estimates and the statistical inferences of the intercept, the slope of the level-2 predictor, and the variance components at level-2. The impact of sample size, selection mechanism, intraclass correlation (ICC), and distributional assumptions on the performance of the methods were examined. The performance of MPML was suboptimal when sample size and ICC were small and when the normality assumption was violated. The bootstrap estimates performed generally well across all the simulation conditions, but had notably suboptimal performance in estimating the covariance component in a random slopes model when sample size and ICCs were large. As an illustration, the bootstrap method is applied to the American data of the OECD’s Program for International Students Assessment (PISA) survey on math achievement using the R package bootmlm.


Author(s):  
K.-H. Herrmann ◽  
D. Krahl ◽  
H.-P Rust

The high detection quantum efficiency (DQE) is the main requirement for an imagerecording system used in electron microscopy of radiation-sensitive specimens. An electronic TV system of the type shown in Fig. 1 fulfills these conditions and can be used for either analog or digital image storage and processing [1], Several sources of noise may reduce the DQE, and therefore a careful selection of various elements is imperative.The noise of target and of video amplifier can be neglected when the converter stages produce sufficient target electrons per incident primary electron. The required gain depends on the type of the tube and also on the type of the signal processing chosen. For EBS tubes, for example, it exceeds 10. The ideal case, in which all impinging electrons create uniform charge peaks at the target, is not obtainable for several reasons, and these will be discussed as they relate to a system with a scintillator, fiber-optic and photo-cathode combination as the first stage.


2018 ◽  
Author(s):  
N.I. Ryakhovskaya ◽  
T.P. Sherstyukova ◽  
M.L. Gamolina

Рассмотрены агроклиматические условия Камчатского края и лимитирующие факторы, сдерживающие рост урожайности картофеля. Приведены характеристики новых сортов картофеля селекции Камчатского НИИСХ созданных в соответствии с приоритетными для региона направлениями селекции, включенных в Государственный реестр селекционных достижений РФ и охраняемых патентами.Agroclimatic conditions of the Kamchatka Krai and limiting factors that restrain the growth of potato yield are considered. The characteristics of new varieties of potatoes of the selection of the Kamchatsky RIA are created in accordance with the priority for the region selection areas included in the State Register of Selection Achievements of the Russian Federation and protected by patents.


Author(s):  
V.N. Zolotarev ◽  
◽  
I.S. Ivanov ◽  
O.N. Lyubtseva

Based on the analysis of data available in the literature and our own experimental material on phytocenotic selection of the stony stalk (Bromopsis inermis Holub.) the important role of competition between plants in the field for the creation of new varieties of perennial grasses that provide high yields of feed polyvid agrophytocenoses is shown.


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