Adaptive Smith-Waterman residue match seeding for protein structural alignment

2013 ◽  
Vol 81 (10) ◽  
pp. 1823-1839 ◽  
Author(s):  
Christopher M. Topham ◽  
Mickaël Rouquier ◽  
Nathalie Tarrat ◽  
Isabelle André
Keyword(s):  
Structural Alignment ◽  
Protein Structural Alignment

Meta-analysis of protein structural alignment

2021 ◽  
Author(s):  
Jim Havrilla
Keyword(s):  
Meta Analysis ◽  
Structural Alignment ◽  
Protein Structural Alignment

Advances and pitfalls of protein structural alignment

2009 ◽  
Vol 19 (3) ◽  
pp. 341-348 ◽  
Author(s):  
Hitomi Hasegawa ◽  
Liisa Holm
Keyword(s):  
Structural Alignment ◽  
Protein Structural Alignment

scholarly journals Convergent algorithms for protein structural alignment

2007 ◽  
Vol 8 (1) ◽  
Author(s):  
Leandro Martínez ◽  
Roberto Andreani ◽  
José Mario Martínez
Keyword(s):  
Structural Alignment ◽  
Protein Structural Alignment

scholarly journals PAUL: protein structural alignment using integer linear programming and Lagrangian relaxation

2009 ◽  
Vol 10 (S13) ◽  
Author(s):  
Inken Wohlers ◽  
Lars Petzold ◽  
Francisco S Domingues ◽  
Gunnar W Klau
Keyword(s):  
Linear Programming ◽  
Lagrangian Relaxation ◽  
Integer Linear Programming ◽  
Structural Alignment ◽  
Protein Structural Alignment

scholarly journals Topology independent protein structural alignment

2007 ◽  
Vol 8 (1) ◽  
pp. 388 ◽  
Author(s):  
Joe Dundas ◽  
TA Binkowski ◽  
Bhaskar DasGupta ◽  
Jie Liang
Keyword(s):  
Structural Alignment ◽  
Protein Structural Alignment ◽  
Independent Protein

Protein structural alignment for detection of maximally conserved regions

2003 ◽  
Vol 105 (2-3) ◽  
pp. 595-608 ◽  
Author(s):  
Vladimir Kotlovyi ◽  
William Lee Nichols ◽  
Lynn F. Ten Eyck
Keyword(s):  
Structural Alignment ◽  
Conserved Regions ◽  
Protein Structural Alignment
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