scholarly journals Comparing the effect of different sample conditions and spectral libraries on the prediction accuracy of soil properties from near- and mid-infrared spectra at the field-scale

2022 ◽  
Vol 215 ◽  
pp. 105196
Author(s):  
T.S. Breure ◽  
J.M. Prout ◽  
S.M. Haefele ◽  
A.E. Milne ◽  
J.A. Hannam ◽  
...  
Sensors ◽  
2020 ◽  
Vol 20 (23) ◽  
pp. 6729
Author(s):  
Shree R. S. Dangal ◽  
Jonathan Sanderman

Recent developments in diffuse reflectance soil spectroscopy have increasingly focused on building and using large soil spectral libraries with the purpose of supporting many activities relevant to monitoring, mapping and managing soil resources. A potential limitation of using a mid-infrared (MIR) spectral library developed by another laboratory is the need to account for inherent differences in the signal strength at each wavelength associated with different instrumental and environmental conditions. Here we apply predictive models built using the USDA National Soil Survey Center–Kellogg Soil Survey Laboratory (NSSC-KSSL) MIR spectral library (n = 56,155) to samples sets of European and US origin scanned on a secondary spectrometer to assess the need for calibration transfer using a piecewise direct standardization (PDS) approach in transforming spectra before predicting carbon cycle relevant soil properties (bulk density, CaCO3, organic carbon, clay and pH). The European soil samples were from the land use/cover area frame statistical survey (LUCAS) database available through the European Soil Data Center (ESDAC), while the US soil samples were from the National Ecological Observatory Network (NEON). Additionally, the performance of the predictive models on PDS transfer spectra was tested against the direct calibration models built using samples scanned on the secondary spectrometer. On independent test sets of European and US origin, PDS improved predictions for most but not all soil properties with memory based learning (MBL) models generally outperforming partial least squares regression and Cubist models. Our study suggests that while good-to-excellent results can be obtained without calibration transfer, for most of the cases presented in this study, PDS was necessary for unbiased predictions. The MBL models also outperformed the direct calibration models for most of the soil properties. For laboratories building new spectroscopy capacity utilizing existing spectral libraries, it appears necessary to develop calibration transfer using PDS or other calibration transfer techniques to obtain the least biased and most precise predictions of different soil properties.


Soil Research ◽  
1995 ◽  
Vol 33 (4) ◽  
pp. 621 ◽  
Author(s):  
LJ Janik ◽  
JO Skjemstad ◽  
MD Raven

Chemical analysis is an important but often expensive and time-consuming step in the characterization of soils. Methods used for soil analysis ideally need to be rapid, accurate and relatively simple and infrared partial least squares (PLS) analysis is potentially one such method. Mid-infrared diffuse reflectance Fourier transform (DRIFT) spectra of powdered soils present the major mineralogical and organic components within each soil, relative to their concentrations. The theory indicates that experimentally derived soil properties may be correlated with the infrared spectra of some of these components, and the covariance between soil properties and spectra can then be modelled by PLS loadings and scores. Factors and scores can be derived independently for each Soil property using PLS-1, an extension of the more general PLS-2 method. This study evaluates the use of PLS-1 for the qualitative and quantitative study of soils, and in particular to classify the soil spectra and their associated major element chemistry by their PLS loadings and Scores. A subset of 100 soils, selected from a complete set of 298 samples from throughout eastern and southern Australia, was analysed by X-ray fluorescence (XRF) for major oxides as a calibration or training set to model the PLS loadings, scores and linear regression coefficients. Linear regressions resulted with R(2) values of 0 . 973-0 . 917 for XRF versus PLS predicted values for SiO2, Al2O3 and Fe2O3. Regressions for the other oxides, e.g. TiO2, MgO and CaO, were generally curved with a linear calibration giving severe underestimations at high concentrations. The PLS loadings and regression coefficients were then used to model the complete soil set to produce scores and concentration predictions for all the samples. The samples were plotted in bivariate score maps to give a visual representation of the spectral variability within the entire soil set. Samples were selected from the boundaries of the groups of soils in these maps for mineralogical characterization using X-ray diffraction (XRD) analysis. The XRD results confirmed the mineralogy obtained from the infrared spectra and PLS weight loadings. For this study, the depiction of the samples in the score maps was found to be of particular importance for demonstrating similarities in composition of the samples.


Icarus ◽  
2021 ◽  
Vol 365 ◽  
pp. 114492
Author(s):  
Noah Jäggi ◽  
André Galli ◽  
Peter Wurz ◽  
Herbert Biber ◽  
Paul Stefan Szabo ◽  
...  

1993 ◽  
Vol 1 (2) ◽  
pp. 99-108 ◽  
Author(s):  
P. Robert ◽  
M.F. Devaux ◽  
A. Qannari ◽  
M. Safar

Multivariate data treatments were applied to mid and near infrared spectra of glucose, fructose and sucrose solutions in order to specify near infrared frequencies that characterise each carbohydrate. As a first step, the mid and near infrared regions were separately studied by performing Principal Component Analyses. While glucose, fructose and sucrose could be clearly identified on the similarity maps derived from the mid infrared spectra, only the total sugar content of the solutions was observed when using the near infrared region. Characteristic wavelengths of the total sugar content were found at 2118, 2270 and 2324 nm. In a second step, the mid and near infrared regions were jointly studied by a Canonical Correlation Analysis. As the assignments of frequencies are generally well known in the mid infrared region, it should be useful to study the relationships between the two infrared regions. Thus, the canonical patterns obtained from the near infrared spectra revealed wavelengths that characterised each carbohydrate. The OH and CH combination bands were observed at: 2088 and 2332 nm for glucose, 2134 and 2252 nm for fructose, 2058 and 2278 nm for sucrose. Although a precise assignment of the near infrared bands to chemical groups within the molecules was not possible, the present work showed that near infrared spectra of carbohydrates presented specific features.


1994 ◽  
Vol 31 (7) ◽  
pp. 205
Author(s):  
Stephen P. Gurden ◽  
Richard G. Brereton ◽  
John A. Groves

Sign in / Sign up

Export Citation Format

Share Document