Localization of tandemly repeated DNA sequences in Arabidopsis thaliana

1991 ◽  
Vol 1 (2) ◽  
pp. 159-166 ◽  
Author(s):  
J. Maluszynska ◽  
J.S. Heslop-Harrison
Genome ◽  
1996 ◽  
Vol 39 (2) ◽  
pp. 243-248 ◽  
Author(s):  
Thomas Schmidt ◽  
Jörg Kudla

Monomers of a major family of tandemly repeated DNA sequences of Antirrhinum majus have been cloned and characterized. The repeats are 163–167 bp long, contain on average 60% A + T residues, and are organized in head-to-tail orientation. According to site-specific methylation differences two subsets of repeating units can be distinguished. Fluorescent in situ hybridization revealed that the repeats are localized at centromeric regions of six of the eight chromosome pairs of A. majus with substantial differences in array size. The monomeric unit shows no homologies to other plant satellite DNAs. The repeat exists in a similar copy number and conserved size in the genomes of six European species of the genus Antirrhinum. Tandemly repeated DNA sequences with homology to the cloned monomer were also found in the North American section Saerorhinum, indicating that this satellite DNA might be of ancient origin and was probably already present in the ancestral genome of both sections. Key words : Antirrhinum majus, satellite DNA, repetitive DNA, methylation, in situ hybridization.


Genomics ◽  
1989 ◽  
Vol 5 (1) ◽  
pp. 153-156 ◽  
Author(s):  
Ulrich Müller ◽  
Marc Lalande ◽  
Timothy A. Donlon ◽  
Michael W. Heartlein

Genome ◽  
1995 ◽  
Vol 38 (6) ◽  
pp. 1255-1261 ◽  
Author(s):  
F. Maggini ◽  
R. D'Ovidio ◽  
M. T. Gelati ◽  
M. Frediani ◽  
R. Cremonini ◽  
...  

Tandemly repeated DNA sequences about 60 bp in length, which may be isolated by digestion with FokI restriction endonuclease, were studied by means of molecular and cytological hybridizations in Vicia faba and other Vicia species. The results obtained can be summarized as follows: (i) FokI repeats are almost species specific to V. faba, since they hybridize to a minimum extent to the genomic DNA of only two out of five related species; (ii) these tandemly repeated elements display variability in structure even within one and the same array, where different repeats may share not more than 71% homology; (iii) their redundancy in the genome of V. faba is remarkably high and varies largely between land races (copy numbers per haploid, 1C, genome range from 21.51 × 106 to 5.39 × 106); (iv) FokI repeats are clustered in differing amounts in each subtelocentric pair of the chromosome complement and are missing or present in a nondetectable amount in the submetacentric pair; (vi) chromosome regions that bear these repeats associate closely to varying degrees in interphase nuclei. These results are discussed in relation to possible functional roles that tandemly repeated DNA sequences such as the FokI elements might play.Key words: FokI, intraspecific DNA changes, nuclear organization, repeated DNA sequences, Vicia faba.


Hereditas ◽  
2008 ◽  
Vol 113 (3) ◽  
pp. 291-295 ◽  
Author(s):  
CHRISTER HALLDéN ◽  
MIKAEL SVENSSON ◽  
TOMAS BRYNGELSSON ◽  
CHRISTINA LIND

PLoS ONE ◽  
2018 ◽  
Vol 13 (3) ◽  
pp. e0195054 ◽  
Author(s):  
Alexandr Sember ◽  
Jörg Bohlen ◽  
Vendula Šlechtová ◽  
Marie Altmanová ◽  
Šárka Pelikánová ◽  
...  

1994 ◽  
Vol 5 (5) ◽  
pp. 735-744 ◽  
Author(s):  
Renate Schmidt ◽  
Joanna Putterill ◽  
Joanne West ◽  
Gerda Cnops ◽  
Frances Robson ◽  
...  

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