A robust parametric method for bias field estimation and segmentation of MR images

Author(s):  
Chunming Li ◽  
C. Gatenby ◽  
Li Wang ◽  
J.C. Gore
2013 ◽  
Vol 756-759 ◽  
pp. 1349-1355 ◽  
Author(s):  
Xiao Li Liu ◽  
Yu Ting Guo ◽  
Jun Kong ◽  
Jian Zhong Wang

Segmentation of brain magnetic resonance (MR) images is always required as a preprocessing stage in many brain analysis tasks. Nevertheless, the bias field (BF, also called intensity in-homogeneities) and noise in the MRI images always make the accurate segmentation difficult. In this paper, we present a modified FCM algorithm for bias field estimation and segmentation of brain MRI. Our method is formulated by modifying the objective function of the standard FCM algorithm. It aims to compensate for bias field and incorporate both the local and non-local information into the distance function to restrain the noise of the image. We have conducted extensive experimental and have compared our method with different types of FCM extension methods using simulated MRI images. The results show that our proposed method can deal with the bias field and noise effectively and outperforms other methods.


2014 ◽  
Vol 26 (05) ◽  
pp. 1450058
Author(s):  
Jingjing Gao ◽  
Mei Xie ◽  
Yan Zhou

Expectation–maximization (EM) algorithm has been extensively applied in brain MR image segmentation. However, the conventional EM method usually leads to severe misclassifications MR images with bias field, due to the significant intensity inhomogeneity. It limits the applications of the conventional EM method in MR image segmentation. In this paper, we proposed an interleaved EM method to perform tissue segmentation and bias field estimation. In the proposed method, the tissue segmentation is performed by the modified EM classification, and the bias field estimation is accomplished by an energy minimization. Moreover, the tissue segmentation and bias field estimation are performed in an interleaved process, and the two processes potentially benefit from each other during the iteration. A salient advantage of the proposed method is that it overcomes the misclassifications from the conventional EM classification for the MR images with bias field. Furthermore, the modified EM algorithm performs the soft segmentation in our method, which is more suitable for MR images than the hard segmentation achieved in Li et al.'s12 method. We have tested our method in the synthetic images with different levels of bias field and different noise, and compared with two baseline methods. Experimental results have demonstrated the effectiveness and advantages of the proposed algorithm.


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