Full‐length MHC class II alleles in three New World monkey species

HLA ◽  
2019 ◽  
Vol 95 (2) ◽  
pp. 163-165
Author(s):  
Nel Otting ◽  
Natasja G. Groot ◽  
Ronald E. Bontrop
2019 ◽  
Vol 72 (1-2) ◽  
pp. 25-36 ◽  
Author(s):  
Natasja G. de Groot ◽  
Nel Otting ◽  
Giuseppe Maccari ◽  
James Robinson ◽  
John A. Hammond ◽  
...  

2003 ◽  
Vol 6 (1) ◽  
pp. 27-37 ◽  
Author(s):  
Julie J. Neiworth ◽  
Eric Steinmark ◽  
Benjamin M. Basile ◽  
Ryann Wonders ◽  
Frances Steely ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Lisanne Storm ◽  
Jesse Bruijnesteijn ◽  
Natasja G. de Groot ◽  
Ronald E. Bontrop

The genes of the leukocyte immunoglobulin-like receptor (LILR) family map to the leukocyte receptor complex (LRC) on chromosome 19, and consist of both activating and inhibiting entities. These receptors are often involved in regulating immune responses, and are considered to play a role in health and disease. The human LILR region and evolutionary equivalents in some rodent and bird species have been thoroughly characterized. In non-human primates, the LILR region is annotated, but a thorough comparison between humans and non-human primates has not yet been documented. Therefore, it was decided to undertake a comprehensive comparison of the human and non-human primate LILR region at the genomic level. During primate evolution the organization of the LILR region remained largely conserved. One major exception, however, is provided by the common marmoset, a New World monkey species, which seems to feature a substantial contraction of the number of LILR genes in both the centromeric and the telomeric region. Furthermore, genomic analysis revealed that the killer-cell immunoglobulin-like receptor gene KIR3DX1, which maps in the LILR region, features one copy in humans and great ape species. A second copy, which might have been introduced by a duplication event, was observed in the lesser apes, and in Old and New World monkey species. The highly conserved gene organization allowed us to standardize the LILR gene nomenclature for non-human primate species, and implies that most of the receptors encoded by these genes likely fulfill highly preserved functions.


2005 ◽  
Vol 79 (7) ◽  
pp. 3930-3937 ◽  
Author(s):  
Byeongwoon Song ◽  
Hassan Javanbakht ◽  
Michel Perron ◽  
Do Hyun Park ◽  
Matthew Stremlau ◽  
...  

ABSTRACT The TRIM5α proteins of humans and some Old World monkeys have been shown to block infection of particular retroviruses following virus entry into the host cell. Infection of most New World monkey cells by the simian immunodeficiency virus of macaques (SIVmac) is restricted at a similar point. Here we examine the antiretroviral activity of TRIM5α orthologs from humans, apes, Old World monkeys, and New World monkeys. Chimpanzee and orangutan TRIM5α proteins functionally resembled human TRIM5α, potently restricting infection by N-tropic murine leukemia virus (N-MLV) and moderately restricting human immunodeficiency virus type 1 (HIV-1) infection. Notably, TRIM5α proteins from several New World monkey species restricted infection by SIVmac and the SIV of African green monkeys, SIVagm. Spider monkey TRIM5α, which has an expanded B30.2 domain v3 region due to a tandem triplication, potently blocked infection by a range of retroviruses, including SIVmac, SIVagm, HIV-1, and N-MLV. Tandem duplications in the TRIM5α B30.2 domain v1 region of African green monkeys are also associated with broader antiretroviral activity. Thus, variation in TRIM5α proteins among primate species accounts for the observed patterns of postentry restrictions in cells from these animals. The TRIM5α proteins of some monkey species exhibit dramatic lengthening of particular B30.2 variable regions and an expanded range of susceptible retroviruses.


2012 ◽  
Vol 64 (8) ◽  
pp. 615-631 ◽  
Author(s):  
Natasja G. de Groot ◽  
Nel Otting ◽  
James Robinson ◽  
Antoine Blancher ◽  
Bernard A. P. Lafont ◽  
...  

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