scholarly journals Complete Genome Sequence of Petrimonas sp. Strain IBARAKI, Assembled from the Metagenome Data of a Culture Containing Dehalococcoides spp.

2018 ◽  
Vol 6 (18) ◽  
pp. e00384-18 ◽  
Author(s):  
Kentaro Ikegami ◽  
Yuto Aita ◽  
Akino Shiroma ◽  
Makiko Shimoji ◽  
Hinako Tamotsu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Circular Chromosome ◽  
Content Type ◽  
Pacbio Rs Ii ◽  
Single Circular Chromosome

ABSTRACT The complete genome sequence of Petrimonas sp. strain IBARAKI in a Dehalococcoides-containing culture was determined using the PacBio RS II platform. The genome is a single circular chromosome of 3,693,233 nucleotides (nt), with a GC content of 44%. This is the first genome sequence of a Petrimonas species.

scholarly journals Complete Genome Sequence of Lactobacillus plantarum Strain LQ80, Selected for Preparation of Fermented Liquid Feed for Pigs

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Naoko Moriya ◽  
Kazuma Nakano ◽  
Akino Shiroma ◽  
Misuzu Shinzato ◽  
Noriko Ashimine ◽  
...  
Keyword(s):  
Lactobacillus Plantarum ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Circular Chromosome ◽  
Content Type ◽  
Liquid Feed ◽  
Pacbio Rs Ii ◽  
Single Circular Chromosome

ABSTRACT Lactobacillus plantarum LQ80 is a strain isolated from liquid feed for pigs. We determined the complete genome sequence of this strain using the PacBio RS II platform. LQ80 contained a single circular chromosome of 3,230,192 bp, with 44.66% G+C content and seven plasmids.

scholarly journals Complete Genome Sequence of Mycoplasma bovis Strain XBY01, Isolated from Henan Province, China

2020 ◽  
Vol 9 (15) ◽  
Author(s):  
Qingchun Shen ◽  
Shijing Sun ◽  
Guanlong Xu ◽  
Xuezheng Fan ◽  
Hui Jiang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Henan Province ◽  
Mycoplasma Bovis ◽  
Circular Chromosome ◽  
Content Type ◽  
Young Calf ◽  
Single Circular Chromosome

We report the complete genome sequence of Mycoplasma bovis strain XBY01, which was isolated from a severely diseased young calf in Henan Province, China, in 2019. The genome of XBY01 contains a single circular chromosome of 986,067 bp, with a GC content of 29.30%.

scholarly journals Near-Complete Genome Sequence of Pseudomonas palleroniana MAB3, a Beneficial 1-Aminocyclopropane-1-Carboxylate Deaminase-Producing Bacterium Able To Promote the Growth of Mushrooms and Plants

2018 ◽  
Vol 6 (16) ◽  
pp. e00242-18 ◽  
Author(s):  
Paola Urón ◽  
Admir J. Giachini ◽  
Bernard R. Glick ◽  
Márcio J. Rossi ◽  
Francisco X. Nascimento
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Circular Chromosome ◽  
Content Type ◽  
Single Circular Chromosome

ABSTRACT The near-complete genome sequence of Pseudomonas palleroniana MAB3, a 1-aminocyclopropane-1-carboxylate deaminase-producing bacterium isolated from an environmental soil Amanita mushroom, is presented here. The genome of P. palleroniana MAB3 contains a single circular chromosome of 6.29 Mb and an average GC content of 60.5%.

scholarly journals Complete Genome Sequence of Streptococcus pneumoniae Strain Rx1, a Hex Mismatch Repair-Deficient Standard Transformation Recipient

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Anna Maria Cuppone ◽  
Lorenzo Colombini ◽  
Valeria Fox ◽  
David Pinzauti ◽  
Francesco Santoro ◽  
...  
Keyword(s):  
Streptococcus Pneumoniae ◽  
Mismatch Repair ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Open Reading Frames ◽  
Circular Chromosome ◽  
Content Type ◽  
Sequencing Technologies

The complete genome sequence of Streptococcus pneumoniae strain Rx1, a Hex mismatch repair-deficient standard transformation recipient, was obtained by combining Nanopore and Illumina sequencing technologies. The genome consists of a 2.03-Mb circular chromosome, with 2,054 open reading frames and a GC content of 39.72%.

scholarly journals Complete Genome Sequence of Lactococcus lactis subsp. lactis G50 with Immunostimulating Activity, Isolated from Napier Grass

2016 ◽  
Vol 6 (8) ◽  
Author(s):  
Kazuma Nakano ◽  
Maiko Minami ◽  
Misuzu Shinzato ◽  
Makiko Shimoji ◽  
Noriko Ashimine ◽  
...  
Keyword(s):  
Lactococcus Lactis ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Napier Grass ◽  
Pennisetum Purpureum ◽  
Circular Chromosome ◽  
Content Type ◽  
Immunostimulating Activity ◽  
Single Circular Chromosome

ABSTRACT Lactococcus lactis subsp. lactis G50 is a strain with immunostimulating activity, isolated from Napier grass ( Pennisetum purpureum ). We determined the complete genome sequence of this strain using the PacBio RS II platform. The single circular chromosome consists of 2,346,663 bp, with 35.03% G+C content and no plasmids.

scholarly journals Complete Genome Sequence of Rhodococcus erythropolis X5, a Psychrotrophic Hydrocarbon-Degrading Biosurfactant-Producing Bacterium

2019 ◽  
Vol 8 (48) ◽  
Author(s):  
Yanina Delegan ◽  
Leonid Valentovich ◽  
Kirill Petrikov ◽  
Anna Vetrova ◽  
Artur Akhremchuk ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rhodococcus Erythropolis ◽  
Gc Content ◽  
Linear Plasmid ◽  
Circular Chromosome ◽  
Content Type ◽  
Cold Adapted ◽  
Degrading Bacterium

Rhodococcus erythropolis X5 is a psychrotrophic (cold-adapted) hydrocarbon-degrading bacterium, as it showed effective n-alkane destruction at low positive temperatures. Here, the genome of strain X5 was completely sequenced; it consists of a 6,472,161-bp circular chromosome (62.25% GC content) and a 526,979-bp linear plasmid, pRhX5-526k (62.37% GC content).

scholarly journals Complete Genome Sequence of Kyrpidia sp. Strain EA-1, a Thermophilic Knallgas Bacterium, Isolated from the Azores

2018 ◽  
Vol 6 (3) ◽  
Author(s):  
Johannes Eberhard Reiner ◽  
Christian Jonas Lapp ◽  
Boyke Bunk ◽  
Cathrin Spröer ◽  
Jörg Overmann ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Hydrothermal Systems ◽  
Circular Chromosome ◽  
Single Circular Chromosome

ABSTRACT Kyrpidia sp. strain EA-1 is a thermophilic hydrogen-oxidizing bacterium isolated from hydrothermal systems at São Miguel Island, Portugal. Here, we present the complete genome sequence of the strain assembled to a single circular chromosome. The genome spans 3,352,175 bp, with a GC content of 58.7%.

scholarly journals Complete Genome Sequence of Riemerella anatipestifer Serotype 10 Strain HXb2

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Qinghai Hu ◽  
Jingjing Qi ◽  
Huimin Bo ◽  
Guangqing Liu ◽  
Minjie Tao ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Open Reading Frames ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Content Type ◽  
Riemerella Anatipestifer ◽  
Single Circular Chromosome ◽  
Reading Frames

ABSTRACT The complete genome sequence of highly virulent Riemerella anatipestifer strain HXb2 was determined. The genome consisted of a single circular chromosome of 2,425,237 bp containing 2,383 putative open reading frames (ORFs), 9 rRNA operons, and 40 tRNA genes.

scholarly journals Complete Genome Sequence of Pseudomonas otitidis Strain MrB4, Isolated from Lake Biwa in Japan

2020 ◽  
Vol 9 (16) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Erina Hase ◽  
Tomomasa Maruya
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Lake Biwa ◽  
Draft Genome ◽  
Circular Chromosome ◽  
Content Type ◽  
Near Shore ◽  
Single Circular Chromosome

We isolated Pseudomonas otitidis strain MrB4 from the near-shore area of Lake Biwa in Japan and generated its complete genome sequence. MrB4 possesses a single circular chromosome of 6,089,454 bp, with ∼97% average nucleotide identity to the P. otitidis type strain MCC10330 (draft genome).

scholarly journals Complete Genome Sequence of Alteromonas sp. Strain I4, Isolated from the Japan Sea

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Kouki Izumi
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Japan Sea ◽  
Circular Chromosome ◽  
Content Type ◽  
The Japan Sea ◽  
Single Circular Chromosome

A novel strain of Alteromonas, I4, was isolated from a shallow beach of the Japan Sea. Here, we report the complete genome sequence of I4; this strain contains a single circular chromosome (5,133,645 bp; G+C content, 48.4%) and a single circular putative plasmid (123,836 bp; G+C content, 45.1%).

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