scholarly journals Draft Genome Sequence of Desulfovibrio sp. Strain CSMB_222, Isolated from Coal Seam Formation Water

2021 ◽  
Vol 10 (48) ◽  
Author(s):  
Andrew G. McLeish ◽  
Paul Greenfield ◽  
David J. Midgley ◽  
Ian T. Paulsen

Subsurface coal seams contain microbial consortia with various taxa, each with a different role in the degradation of coal organic matter. This study presents the sequenced and annotated genome of Desulfovibrio sp. strain CSMB_222, a bacterium isolated from eastern Australian coal seams.

2021 ◽  
Vol 10 (10) ◽  
Author(s):  
Silas H. W. Vick ◽  
Paul Greenfield ◽  
Sasha G. Tetu ◽  
David J. Midgley ◽  
Ian T. Paulsen

ABSTRACT Subsurface coal seams harbor an array of diverse microbial species subsisting as a community on the organic matter present in coal. Here, we present the annotated genome sequence of Dietzia sp. strain SYD-A1, a bacterium isolated from a terrestrial subsurface coal seam in New South Wales, Australia.


2013 ◽  
Vol 1 (1) ◽  
Author(s):  
C. P. Rosewarne ◽  
P. Greenfield ◽  
D. Li ◽  
N. Tran-Dinh ◽  
M. I. Bradbury ◽  
...  

2019 ◽  
Vol 95 (7) ◽  
Author(s):  
Silas H W Vick ◽  
Se Gong ◽  
Stephen Sestak ◽  
Tania J Vergara ◽  
Kaydy L Pinetown ◽  
...  

ABSTRACTMicrobial communities in subsurface coal seams are responsible for the conversion of coal organic matter to methane. This process has important implications for both energy production and our understanding of global carbon cycling. Despite the environmental and economic importance of this process, little is known about which components of the heterogeneous coal organic matter are biodegradable under methanogenic conditions. Similarly, little is known about which taxa in coal seams carry out the initial stages of coal organics degradation. To identify the biodegradable components of coal and the microorganisms responsible for their breakdown, a subbituminous coal was fractionated into a number of chemical compound classes which were used as the sole carbon source for growth by a coal seam microbial community. This study identifies 65 microbial taxa able to proliferate on specific coal fractions and demonstrates a surprising level of substrate specificity among members of this coal-degrading microbial consortia. Additionally, coal kerogen, the solvent-insoluble organic component of coal often considered recalcitrant to microbial degradation, appeared to be readily converted to methane by microbial degradation. These findings challenge our understanding of coal organic matter catabolism and provide insights into the catabolic roles of individual coal seam bacteria.


2018 ◽  
Vol 7 (21) ◽  
Author(s):  
Denis S. Grouzdev ◽  
Salimat K. Bidzhieva ◽  
Diyana S. Sokolova ◽  
Tatiyana P. Tourova ◽  
Ekaterina O. Patutina ◽  
...  

The draft genome sequence of an anaerobic fermenting bacterium, “Sphaerochaeta halotolerans” strain 4-11T, isolated from formation water of a low-temperature petroleum reservoir in Russia is presented. The genome is annotated to elucidate the taxonomic position of the strain 4-11T and to extend the public genome database.


2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Joseph Adelskov ◽  
Bharat K. C. Patel

ABSTRACT Cellulosilyticum sp. strain I15G10I2 was isolated from a coal seam gas water treatment pond at the Spring Gully water treatment facility, Roma, Queensland, Australia. Analysis of the genome of 4,489,861 bp and G+C content of 35.23% revealed that strain I15G10I2 shared limited similarity to members of the genus Cellulosilyticum, family Lachnospiraceae.


2021 ◽  
Vol 10 (2) ◽  
Author(s):  
Rebecca E. Cooper ◽  
Carl-Eric Wegner ◽  
Kirsten Küsel

ABSTRACT Here, we report the draft genome sequence of Pseudomonas sp. strain FEN, a nonfluorescent siderophore producer that was isolated from the Schlöppnerbrunnen fen, which is characterized by high concentrations of Fe, dissolved organic matter (DOM), and Fe-DOM complexes. This draft genome sequence provides insight into the mechanisms of siderophore biosynthesis and siderophore-mediated iron uptake by this bacterium.


2017 ◽  
Vol 5 (17) ◽  
Author(s):  
Joseph Adelskov ◽  
Bharat K. C. Patel

ABSTRACT Microbacterium sp. strain TNHR37B was isolated from a geothermal bore well sample (50°C) collected from a region of coal seam gas extraction activities. The 3.5-Mb genome with a G+C content of 69.9% contained unique genes, and a low similarity value for average nucleotide identity using BLAST was observed with the available 73 Microbacterium sp. genomes.


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