scholarly journals Diversity of bacterium communities in saline-alkali soil in arid regions of Northwest China

2022 ◽  
Vol 22 (1) ◽  
Author(s):  
Lili Nan ◽  
Quanen Guo ◽  
Shiyu Cao ◽  
Zongbing Zhan
Keyword(s):  
Ph Value ◽  
Influencing Factor ◽  
Illumina Miseq ◽  
Northwest China ◽  
Diversity Indices ◽  
Gansu Province ◽  
Alkali Soil ◽  
The North ◽  
Microbial Resources ◽  
Richness Estimators

Abstract Background The saline-alkali soil area accounts for over 1/4-1/5 of the land area in Gansu Province of China, which are mainly distributed in the north of Hexi corridor and Jingtai basin. The unique ecological environment contains unique and diverse microbial resources. The investigation of microbial diversity in saline environment is vital to comprehend the biological mechanisms of saline adaption, develop and utilize microbial resources. Results The Illumina MiSeq sequencing method was practiced to investigate the bacterial diversity and composition in the 5 subtypes and 13 genera of saline-alkali soil in Gansu Province, China. The results from this study show that Proteobacteria, Bacteroidetes, Actinobacteria, Firmicutes, and Gemmatimonadetes were the dominant bacterial groups in 13 saline soil. Proteobacteria had the greatest abundance in sulfate-type meadow solonchaks and orthic solonchaks, chloride-type orthic solonchaks and bog solonchaks, sulfate-chloride-type, chloride-sulfate-type, and sulfate-type dry solonchaks. Halobacteria was the dominant bacterial class in soil samples except for sulfate-type meadow solonchaks and orthic solonchaks, chloride-type orthic solonchaks and bog solonchaks. The richness estimators of Ace and Chao 1 and the diversity indices of Shannon and Simpson revealed the least diversity in bacterial community in sulfate-chloride-type orthic solonchaks. Conclusions The sulfate anion was the most important driving force for bacterial composition (17.7%), and the second most influencing factor was pH value (11.7%).

scholarly journals Diversity of Bacterium Communities in Saline-Alkali Soil in Arid Regions of Northwest China

2021 ◽  
Author(s):  
Lili Nan ◽  
Quanen Guo ◽  
shiyu cao ◽  
zongbing zhan
Keyword(s):  
Ph Value ◽  
Influencing Factor ◽  
Illumina Miseq ◽  
Northwest China ◽  
Diversity Indices ◽  
Gansu Province ◽  
Alkali Soil ◽  
Main Indicator ◽  
Chloride Sulfate ◽  
Microbial Groups

Abstract Background: The Illumina MiSeq sequencing method was practiced to investigate the bacterial diversity and composition in the 5 subtypes and 13 genera of saline-alkali soil in Gansu Province, China. Results: The results from this study show that the dominant bacterial groups were Euryarchaeota, Proteobacteria, Bacteroidetes, Actinobacteria, Firmicutes, and Gemmatimonadetes among the different salinity soil. Euryarchaeota and Proteobacteria were the main indicator species reflecting changes of the main microbial groups. Euryarchaeota was the most abundant in chloride-sulfate-type meadow solonchaks, sulfate-chloride-type meadow solonchaks, chloride-type meadow solonchaks, chloride-sulfate-type orthic solonchaks, sulfate-chloride-type orthic solonchaks, magnesium solonetz, sulfate-type dry solonchaks, chloride-sulfate-type dry solonchaks, and sulfate-chloride-type dry solonchaks, whereas Proteobacteria had the greatest abundance in sulfate-type meadow solonchaks, sulfate-type orthic solonchaks, chloride-type orthic solonchaks, and chloride-type bog solonchaks. Halobacteria was the dominant bacterial class in soil samples except sulfate-type meadow solonchaks, chloride-type orthic solonchaks, sulfate-type orthic solonchaks, and chloride-type bog solonchaks. The richness estimators of Ace and Chao 1 and the diversity indices of Shannon and Simpson revealed a less bacterial community in sulfate-chloride-type orthic solonchaks than that of other soils. Conclusions: The pH value was the most important driving force for bacterial composition (32.1%), and the second most influencing factor was sulfate anion (9.2%) and soil total salt (8.7) contents.

scholarly journals PSIX-6 Gastrointestinal microbiome of calves fed solid diets containing different levels and sources of NDF

2020 ◽  
Vol 98 (Supplement_4) ◽  
pp. 418-419
Author(s):  
Gercino F Virgínio Júnior ◽  
Milaine Poczynek ◽  
Ana Paula Silva ◽  
Ariany Toledo ◽  
Amanda Cezar ◽  
...  
Keyword(s):  
Illumina Miseq ◽  
Diversity Indices ◽  
Dairy Calves ◽  
Rrna Gene ◽  
Gastrointestinal Microbiome ◽  
Fecal Microbiome ◽  
Miseq Platform ◽  
Holstein Calves ◽  
Ad Libitum ◽  
Different Levels

Abstract Different levels and sources of NDF can modify the gastrointestinal microbiome. This study evaluated 18 Holstein calves housed in not-bedded suspended individual cages and fed one of three treatments: 22NDF - conventional starter containing 22% NDF (n = 7); 31NDF - starter with 31% NDF, replacing part of the corn by soybean hull (n = 6); and 22NDF+H - conventional starter with 22% NDF plus coast-cross hay ad libitum (n = 5). All animals received 4 L of milk replacer daily (24% CP; 18.5% fat; diluted to 12.5% solids), divided into two meals, being weaned at 8th week of age. After weaning, animals were housed in tropical shelters, fed with the respective solid diet and coast-cross hay ad libitum for all treatments. To evaluate the microbiome, ruminal fluid samples were collected using a modified Geishauser oral probe at weeks 2, 4, 6, 8 and 10, two hours after the morning feeding, and fecal samples were collected at birth (0) and at weeks 1, 2, 4, 8 and 10. The microbial community was determined by sequencing V3 and V4 region amplicons of the 16S rRNA gene that was amplified by PCR and sequenced by the Illumina MiSeq platform. Ruminal microbiome had no differences in diversity for the effects of weeks, treatments or interaction of both factors (Table 1). In feces, the diversity indices and evenness were higher for 22NDF+H when compared to 22NDF, with no difference for 31NDF. All indices were significantly affected by calves age. At birth, calves had the greatest diversity and richness. Week 1 and 2 had less evenness and diversity. Bacteroidota, Firmicutes_A and Firmicutes_C were the most abundant phylum in rumen and feces. The supply of hay was only effective in modifying the fecal microbiome of dairy calves, suggesting a resilience in the ruminal microbiome.

scholarly journals The Fecal Bacterial Microbiota in Horses with Equine Recurrent Uveitis

Animals ◽  
2021 ◽  
Vol 11 (3) ◽  
pp. 745
Author(s):  
Michelle Martin de Bustamante ◽  
Diego Gomez ◽  
Jennifer MacNicol ◽  
Ralph Hamor ◽  
Caryn Plummer
Keyword(s):  
Beta Diversity ◽  
High Throughput Sequencing ◽  
Illumina Miseq ◽  
Diversity Indices ◽  
Rrna Gene ◽  
Linear Discriminant ◽  
Alpha And Beta Diversity ◽  
Bacterial Microbiota ◽  
Healthy Control ◽  
Equine Recurrent Uveitis

The objective of this study was to describe and compare the fecal bacterial microbiota of horses with equine recurrent uveitis (ERU) and healthy horses using next-generation sequencing techniques. Fecal samples were collected from 15 client-owned horses previously diagnosed with ERU on complete ophthalmic examination. For each fecal sample obtained from a horse with ERU, a sample was collected from an environmentally matched healthy control with no evidence of ocular disease. The Illumina MiSeq sequencer was used for high-throughput sequencing of the V4 region of the 16S rRNA gene. The relative abundance of predominant taxa, and alpha and beta diversity indices were calculated and compared between groups. The phyla Firmicutes, Bacteroidetes, Verrucomicrobia, and Proteobacteria predominated in both ERU and control horses, accounting for greater than 60% of sequences. Based on linear discriminant analysis effect size (LEfSe), no taxa were found to be enriched in either group. No significant differences were observed in alpha and beta diversity indices between groups (p > 0.05 for all tests). Equine recurrent uveitis is not associated with alteration of the gastrointestinal bacterial microbiota when compared with healthy controls.

scholarly journals Solar Brightening/Dimming over China’s Mainland: Effects of Atmospheric Aerosols, Anthropogenic Emissions, and Meteorological Conditions

2020 ◽  
Vol 13 (1) ◽  
pp. 88
Author(s):  
Hejin Fang ◽  
Wenmin Qin ◽  
Lunche Wang ◽  
Ming Zhang ◽  
Xuefang Yang
Keyword(s):  
Atmospheric Aerosols ◽  
Southern China ◽  
Influencing Factor ◽  
Precipitable Water ◽  
Northwest China ◽  
Meteorological Conditions ◽  
Anthropogenic Emissions ◽  
Main Role ◽  
Surface Solar Radiation ◽  
Climate Change Research

Surface solar radiation (SSR) is the main factor affecting the earth’s climate and environment and its variations and the reason for these variations are an important part of climate change research. In this research, we investigated the long-term variations of SSR during 1984–2016 and the quantitative influences of atmospheric aerosols, anthropogenic emissions, and meteorological conditions on SSR over China’s mainland. The results show the following: (1) The annual average SSR values had a decline trend at a rate of −0.371 Wm−2 yr−1 from 1984 to 2016 over China. (2) The aerosol optical depth (AOD) plays the main role in inducing variations in SSR over China, with r values of −0.75. Moreover, there are marked regional differences in the influence of anthropogenic emissions and meteorological conditions on SSR trends. (3) From a regional perspective, AOD is the main influencing factor on SSR in northeast China (NEC), Yunnan Plateau and surrounding regions (YPS), North China (NC), and Loess Plateau (LP), with r values of −0.65, −0.60, −0.89, and −0.50, respectively. However, the main driving factors for SSR in northwest China (NWC) are “in cloud optical thickness of all clouds” (TAUTOT) (−0.26) and black carbon (BC) anthropogenic emissions (−0.21). TAUTOT (−0.39) and total precipitable water vapor (TQV) (−0.29) are the main influencing factors of SSR in the middle-lower Yangtze Plain (MYP). The main factors that influence SSR in southern China (SC) are surface pressure (PS) (−0.66) and AOD (−0.43). This research provides insights in understanding the variations of SSR and its relationships with anthropogenic conditions and meteorological factors.

scholarly journals Prevalence of gastrointestinal parasites in free-range yaks (Bos grunniens) in Gansu Province, Northwest China

2019 ◽  
Vol 15 (1) ◽  
Author(s):  
Si-Yuan Qin ◽  
Ming-Yang Yin ◽  
Guang-Yao Song ◽  
Qi-Dong Tan ◽  
Jin-Lei Wang ◽  
...  
Keyword(s):  
Northwest China ◽  
Gansu Province ◽  
Gastrointestinal Parasites ◽  
Economic Losses ◽  
Parasitic Infections ◽  
Cattle Industry ◽  
Free Range ◽  
Bos Grunniens ◽  
High Prevalence ◽  
Different Seasons

Abstract Background Little information about the prevalence of gastrointestinal parasites in yaks (Bos grunniens) in northwest China is available. Therefore, the objective of the study was to quantify faecal egg counts of gastrointestinal parasites (helminths and coccidia) in free-range yaks from Gannan Tibetan Autonomous Prefecture, Gansu Province, Northwest China. Results Parasites were detected in 290 of 733 (39.56%) faecal samples. The results showed that Strongylidae, Trichuris spp. and Eimeria spp. were detected all year round, Strongyloides papillosus was detected in autumn and summer, and Nematodirus spp. was detected in both autumn and spring. In contrast, Fasciola spp. was only detected in spring. The prevalence rates of parasitic infections in different seasons were significantly different. Conclusions To our knowledge, this is the first investigation of gastrointestinal parasites in yaks (Bos grunniens) in Gansu, China. The results demonstrated a high prevalence of gastrointestinal parasitic infections, specifically GN infections, in yaks in GTAP and these infections can cause economic losses to the local cattle industry.

An inverse relationship between moisture and grazing intensity in an arid mountain-basin system

2021 ◽  
pp. 030913332110600
Author(s):  
Jun Zhang ◽  
Xiao-zhong Huang ◽  
Jia-le Wang ◽  
Richard HW Bradshaw ◽  
Tao Wang ◽  
...  
Keyword(s):  
Arid Region ◽  
Influencing Factor ◽  
Regional Climate ◽  
Fungal Spores ◽  
Grazing Intensity ◽  
Pollen Grains ◽  
High Mountains ◽  
Spores And Pollen ◽  
The North ◽  
Basin System

Precipitation has been suggested as a crucial influencing factor in the primary productivity in arid and semi-arid regions, yet how moisture fluctuation in an arid mountain-basin system of the north Qinghai–Tibetan Plateau has affected human activities is poorly understood. Here, we reconstruct the variations of grazing intensity in high elevations and regional humidity based on independent and high-resolution records of Sporormiella-type coprophilous fungal spores and pollen grains in the same well-dated sediment core from Lake Tian’E in the western Qilian Mountains over the past 3500 years. We find that stronger grazing activity was associated with low regional effective moisture, and propose that the drier regional climate pushed people and their livestock into the mountainous areas. A notable exception was a reduction of human and grazing activities in arid region with high mountains during 380–580 CE caused by centennial-length dry and cold conditions. In addition, it is also noteworthy that intensified grazing activity occurred during 580–720 CE and after ∼1920 CE, corresponding to a warmer and wetter climate and diverse subsistence strategies with social developments in the lowlands of the Hexi Corridor. Our findings potentially provide a historical reference for understanding how ancient people adapted to the climate change in arid region with high mountains.

scholarly journals Different trends between extreme and median surface aerosol extinction coefficients over China inferred from quality controlled visibility data

2017 ◽  
Author(s):  
Jing Li ◽  
Chengcai Li ◽  
Chunsheng Zhao
Keyword(s):  
Northwest China ◽  
Positive Trend ◽  
Median Surface ◽  
Aerosol Extinction ◽  
Significance Level ◽  
The North ◽  
Synoptic Conditions ◽  
The Mean ◽  
Mean Trend ◽  
Year 2000

Abstract. Although the temporal changes of aerosol properties have been widely investigated, the majority focused on the averaged condition without much emphasis on the extremes. However, the latter can be more important in terms of human health and climate change. This study uses a previously validated, quality-controlled visibility dataset to investigate the long-term trends of extreme surface aerosol extinction coefficient (AEC) over China, and compare them with the median trends. Two methods are used to independently evaluate the trends, which arrive at consistent results. The sign of extreme and median trends are generally coherent, whereas their magnitudes show distinct spatial and temporal differences. In the 1980s, an overall positive trend is found throughout China with the extreme trend exceeding the mean trend, except for Northwest China and the North China Plain. In the 1990s, AEC over Northeast and Northwest China starts to decline while the rest of the country still exhibits an increase. The extreme trends continue to dominate in the south while it yields to the mean trend in the north. After year 2000, the extreme trend becomes weaker than the mean trend overall in terms of both the magnitude and significance level. The annual trend can be primarily attributed to winter and fall trends. The results suggest that the decadal changes of pollution in China may be governed by different mechanisms. Synoptic conditions that often result in extreme air quality changes might dominate in the 1980s, whereas emission increase might be the main factor for the 2000s.

scholarly journals NH<sub>3</sub>-promoted hydrolysis of NO<sub>2</sub> induces explosive growth in HONO

2018 ◽  
Author(s):  
Wanyun Xu ◽  
Ye Kuang ◽  
Chunsheng Zhao ◽  
Jiangchuan Tao ◽  
Gang Zhao ◽  
...  
Keyword(s):  
North China Plain ◽  
North China ◽  
Ph Value ◽  
Primary Source ◽  
Field Measurements ◽  
Oh Radicals ◽  
The North ◽  
The North China Plain ◽  
First Time ◽  
Hydrolysis Of

Abstract. The study of atmospheric nitrous acid (HONO), which is the primary source of OH radicals, is crucial to atmospheric photochemistry and heterogeneous chemical processes. The heterogeneous NO2 chemistry under haze conditions was pointed out to be one of the missing sources of HONO on the North China Plain, producing sulfate and nitrate in the process. However, controversy exists between various proposed mechanisms, mainly debating on whether SO2 directly takes part in the HONO production process and what roles NH3 and the pH value play in it. In this paper, never before seen explosive HONO production (maximum rate: 16 ppb/hour) was reported and evidence was found for the first time in field measurements during fog episodes (usually with pH > 5) and haze episodes under high relative humidity (usually with pH 

scholarly journals Characteristics of Spatial-Temporal Evolution of Meteorological Drought in the Ningxia Hui Autonomous Region of Northwest China

Water ◽  
2018 ◽  
Vol 10 (8) ◽  
pp. 992 ◽  
Author(s):  
Yuan Fang ◽  
Hui Qian ◽  
Jie Chen ◽  
Han Xu
Keyword(s):  
Time Scales ◽  
Wavelet Coefficient ◽  
Meteorological Drought ◽  
Northwest China ◽  
Scientific Basis ◽  
The North ◽  
Ningxia Hui Autonomous Region ◽  
Frequency Domains ◽  
Drought Disaster ◽  
Wavelet Variance

This study focuses on the intensity, duration, and frequency of meteorological droughts in Ningxia, northwest China, from 1960 to 2016. The analysis was conducted using the interannual characteristics of droughts, which were studied by the standardized precipitation evapotranspiration index (SPEI) at different timescales. Additionally, the correlation, mutability, and periodicity of two series in both the time and frequency domains in multi-time scales were scientifically analyzed using the wavelet analysis method. The results showed that the occurrence of drought had increased at different timescales (i.e., SPEI1, SPEI3, and SPEI12) during the past 57 years. The autumn drought had the largest share; spring is the high-occurrence season of extreme drought and the overall drought intensity increases towards the north. The periodical change of droughts was described with the wavelet coefficient real part value, wavelet power spectrum, and wavelet variance. The results showed that the 13- and 8-year time scales had the strongest oscillation and energy, and they were the first and the second major periods of drought. Moreover, the drought mutational fluctuations are in better agreement with that characterized by the SPEI12 and actual conditions. The results help to understand the occurrence and evolution of droughts in Ningxia, and to provide a scientific basis to reduce and prevent the drought disaster.

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