scholarly journals Diversity of endophytic bacteria and microfungi in Syzygium cumini fruit from West Java, Indonesia

2021 ◽  
Vol 22 (9) ◽  
Author(s):  
IDA INDRAWATI ◽  
NIA ROSSIANA ◽  
Muhammad Faizal Fathurrohim
Keyword(s):  
Endophytic Bacteria ◽  
Fungal Endophytes ◽  
Candida Guilliermondii ◽  
Syzygium Cumini ◽  
Isolation And Identification ◽  
West Java ◽  
Aspergillus Sp ◽  
Bacteria And Fungi ◽  
Endophyte Fungi ◽  
Harmful Effects

Abstract. Rossiana N, Fathurrohim MF, Indrawati I. 2021. Diversity of endophytic bacteria and microfungi in Syzygium cumini fruit from West Java, Indonesia. Biodiversitas 22: 3943-3948. Syzygium cumini L. Skells is a native evergreen tropical tree in Southeast Asia belong to the Myrtaceae family, known as the Java plum, jambul, jambolan, jamblang, or jamun. The bacterial and fungal endophytes associated with fruit have not been determined and functionally characterized. The endophytic microbes live inside the surface-sterilized fruits and have no visibly harmful effects on the plants. The purposes of the study were to isolate, characterize, and determine the diversity of endophytic bacteria and fungi in S. cumini fruit. The endophytes from S. cumini fruit were observed morphologically for identification. The result of isolation and identification showed there are four bacterial isolate endophytes (B. cereus, B. subtilis, B. megaterium, and Bacillus sp.) and four fungal endophytes (Candida guilliermondii, Penicillium sp., Mycelia sterilia, and Aspergillus sp.) isolated from S. cumini fruit.   Keywords:Biodiversity, Bacterial endophyte, Fungi endophyte, Jamblang

scholarly journals Effect of Ionizing Radiation on the Bacterial and Fungal Endophytes of the Halophytic Plant Kalidium schrenkianum

2021 ◽  
Vol 9 (5) ◽  
pp. 1050
Author(s):  
Jing Zhu ◽  
Xiang Sun ◽  
Zhi-Dong Zhang ◽  
Qi-Yong Tang ◽  
Mei-Ying Gu ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Ionizing Radiation ◽  
Endophytic Bacteria ◽  
Fungal Endophytes ◽  
Root Endophytes ◽  
Fungal Community Structure ◽  
Geochemical Factors ◽  
Bacteria And Fungi ◽  
High Level ◽  
And Control

Endophytic bacteria and fungi colonize plants that grow in various types of terrestrial and aquatic ecosystems. Our study investigates the communities of endophytic bacteria and fungi of halophyte Kalidium schrenkianum growing in stressed habitats with ionizing radiation. The geochemical factors and radiation (at low, medium, high level and control) both affected the structure of endophytic communities. The bacterial class Actinobacteria and the fungal class Dothideomycetes predominated the endophytic communities of K. schrenkianum. Aerial tissues of K. schrenkianum had higher fungal diversity, while roots had higher bacterial diversity. Radiation had no significant effect on the abundance of bacterial classes. Soil pH, total nitrogen, and organic matter showed significant effects on the diversity of root endophytes. Radiation affected bacterial and fungal community structure in roots but not in aerial tissues, and had a strong effect on fungal co-occurrence networks. Overall, the genetic diversity of both endophytic bacteria and fungi was higher in radioactive environments, however negative correlations were found between endophytic bacteria and fungi in the plant. The genetic diversity of both endophytic bacteria and fungi was higher in radioactive environments. Our findings suggest that radiation affects root endophytes, and that the endophytes associated with aerial tissues and roots of K. schrenkianum follow different mechanisms for community assembly and different paradigms in stress response.

scholarly journals Effect of ionizing radiation on the bacterial and fungal endophytes of the halophytic plant Kalidium schrenkianum

2020 ◽  
Author(s):  
Jing Zhu ◽  
翔(Xiang) 孙(Sun) ◽  
Zhidong Zhang ◽  
Qiyong Tang ◽  
Meiying Gu ◽  
...  
Keyword(s):  
Ionizing Radiation ◽  
Aquatic Ecosystems ◽  
Endophytic Bacteria ◽  
Fungal Endophytes ◽  
High Radiation ◽  
Halophytic Plant ◽  
Geochemical Factors ◽  
Bacteria And Fungi ◽  
High Level ◽  
And Control

Endophytes are microbes found within tissues of plants in various types of terrestrial and aquatic ecosystems, including those habitats with ionizing radiation. Our study investigates the differences in composition of bacterial and fungal endophytes associated with the halophytic plant Kalidium schrenkianum and the effects of geochemical factors and radiation (at low, medium, high level and control) on the community structure of endophytic bacteria and fungi. The bacterial class Actinobacteria and the fungal class Dothideomycetes predominated the endophytic communities of K. schrenkianum. Aboveground parts had higher fungal diversity while belowground parts had higher bacterial diversity. Soil pH, total nitrogen, and organic matter showed significant effects on the diversity of root endophytes. Radiation had no significant effect on the abundance of different bacterial classes. Sordariomycetes predominated the root fungal microbiota under high radiation intensity. Differences in the endophytic communities between aboveground and belowground parts were more than that between the radiation levels. No significant differences were found in the aboveground bacterial communities among the radiation levels. Radiation showed a significant effect on the fungal co-occurrence networks. Negative correlations were found between endophytic bacteria and fungi in the plant. The genetic diversity of both endophytic bacteria and fungi was higher in radioactive environments. Our findings suggest that the endophytes associated with aboveground and belowground parts of K. schrenkianum follow different mechanisms for community assembly and different paradigms in stress response.

scholarly journals Isolation and Identification of Pathogenic Bacteria and Fungi from Some Saudi Bank Note Currency

2017 ◽  
Vol 14 (2) ◽  
pp. 715-720
Author(s):  
Abdulmoniem M. A. Saadabi ◽  
Mohammed S. Alhussaini ◽  
Abdullah A. Al-Ghanayem ◽  
Babu Joseph ◽  
Mohammed S. A-l Shuriam
Keyword(s):  
Pathogenic Bacteria ◽  
Pathogenic Fungi ◽  
Personal Hygiene ◽  
Isolation And Identification ◽  
Bank Note ◽  
Candida Sp ◽  
Alternaria Sp ◽  
Aspergillus Sp ◽  
Bacteria And Fungi ◽  
Bank Notes

ABSTRACT: Saudi Bank notes in different values were critically evaluated to show the level of contamination with pathogenic bacteria and fungi using standard techniques. The fungal genera Trichophyton sp., Microsporum sp., Epidermophyton sp., Aspergillus sp., Alternaria sp., Penicillium sp., Candida sp., Phycomyces sp., Saccharomyces sp. and Cladosporium sp. were isolated and identified. The genera of bacteria that isolated were Escherichia coli, Citrobacter sp., Klebsiella sp., Proteus sp., Streptococcus sp., Bacillus sp., Corynebacterium sp. and Staphylococcus sp. The potential of Saudi currency notes to act as environmental vehicles for transmission of pathogenic fungi & bacteria was assessed. The lower values of bank notes were highly contaminated and there is a negative correlation between bank notes value and microbial contamination. The results suggest that currency notes may be contaminated, especially with bacteria and enteric microbes and may serve as a source of contamination or infection. Personal hygiene and electronic or credit banking to reduce the risk of infection were recommended.

scholarly journals Antimicrobial metabolite profiling of Nigrospora sphaerica from Adiantum philippense L.

2020 ◽  
Vol 18 (1) ◽  
Author(s):  
Kolathuru Puttamadaiah Ramesha ◽  
Nagabhushana Chandra Mohana ◽  
Bettadapura Rameshgowda Nuthan ◽  
Devaraju Rakshith ◽  
Sreedharamurthy Satish
Keyword(s):  
Escherichia Coli ◽  
Antimicrobial Activity ◽  
Xanthomonas Campestris ◽  
Fungal Endophytes ◽  
Leaf Segment ◽  
Spectroscopic Techniques ◽  
Biological Potential ◽  
Bioassay Guided Fractionation ◽  
Antimicrobial Metabolite ◽  
Bacteria And Fungi

Abstract Background Endophyte bestows beneficial aspects to its inhabiting host, along with a contribution to diverse structural attributes with biological potential. In this regard, antimicrobial profiling of fungal endophytes from medicinal plant Adiantum philippense revealed bioactive Nigrospora sphaerica from the leaf segment. Chemical and biological profiling through TLC–bioautography and hyphenated spectroscopic techniques confirmed the presence of phomalactone as an antimicrobial metabolite. Results The chemical investigation of the broth extract by bioassay-guided fractionation confirmed phomalactone as a bioactive antimicrobial secondary metabolite. The antimicrobial activity of phomalactone was found to be highest against Escherichia coli by disc diffusion assay. The MIC was found to be significant against both Escherichia coli and Xanthomonas campestris in the case of bacteria and dermatophyte Candida albicans at 150 μg/ml, respectively. Conclusions Overall, the results highlighted the antimicrobial potential of phomalactone from the endophyte Nigrospora sphaerica exhibiting a broad spectrum of antimicrobial activity against human and phytopathogenic bacteria and fungi. This work is the first report regarding the antibacterial activity of phomalactone.

scholarly journals The Influence of the Grapevine Bacterial and Fungal Endophytes on Biomass Accumulation and Stilbene Production by the In Vitro Cultivated Cells of Vitis amurensis Rupr.

Plants ◽  
2021 ◽  
Vol 10 (7) ◽  
pp. 1276
Author(s):  
Olga A. Aleynova ◽  
Andrey R. Suprun ◽  
Nikolay N. Nityagovsky ◽  
Alexandra S. Dubrovina ◽  
Konstantin V. Kiselev
Keyword(s):  
Cell Culture ◽  
Cell Suspension ◽  
Endophytic Fungi ◽  
Endophytic Bacteria ◽  
Fungal Endophytes ◽  
Biomass Accumulation ◽  
Vitis Amurensis ◽  
Grape Cell ◽  
Stilbene Biosynthesis

Plant endophytes are known to alter the profile of secondary metabolites in plant hosts. In this study, we identified the main bacterial and fungal representatives of the wild grape Vitis amurensis Rupr. microbiome and investigated a cocultivation effect of the 14 endophytes and the V. amurensis cell suspension on biomass accumulation and stilbene biosynthesis. The cocultivation of the V. amurensis cell culture with the bacteria Agrobacterium sp., Bacillus sp., and Curtobacterium sp. for 2 weeks did not significantly affect the accumulation of cell culture fresh biomass. However, it was significantly inhibited by the bacteria Erwinia sp., Pantoea sp., Pseudomonas sp., and Xanthomonas sp. and fungi Alternaria sp., Biscogniauxia sp., Cladosporium sp., Didymella sp. 2, and Fusarium sp. Cocultivation of the grapevine cell suspension with the fungi Didymella sp. 1 and Trichoderma sp. resulted in cell death. The addition of endophytic bacteria increased the total stilbene content by 2.2–5.3 times, while the addition of endophytic fungi was more effective in inducing stilbene accumulation by 2.6–16.3 times. The highest content of stilbenes in the grapevine cells cocultured with endophytic fungi was 13.63 and 13.76 mg/g of the cell dry weight (DW) after cultivation with Biscogniauxia sp. and Didymella sp. 2, respectively. The highest content of stilbenes in the grapevine cells cocultured with endophytic bacteria was 4.49 mg/g DW after cultivation with Xanthomonas sp. The increase in stilbene production was due to a significant activation of phenylalanine ammonia lyase (PAL) and stilbene synthase (STS) gene expression. We also analyzed the sensitivity of the selected endophytes to eight antibiotics, fluconazole, and trans-resveratrol. The endophytic bacteria were sensitive to gentamicin and kanamycin, while all selected fungal strains were resistant to fluconazole with the exception of Cladosporium sp. All endophytes were tolerant of trans-resveratrol. This study showed that grape endophytes stimulate the production of stilbenes in grape cell suspension, which could further contribute to the generation of a new stimulator of stilbene biosynthesis in grapevine or grape cell cultures.

scholarly journals Diversity and Antimicrobial Activity of Culturable Fungal Endophytes in Solanum mauritianum

2020 ◽  
Vol 17 (2) ◽  
pp. 439 ◽  
Author(s):  
Sharon Pelo ◽  
Vuyo Mavumengwana ◽  
Ezekiel Green
Keyword(s):  
Deoxyribonucleic Acid ◽  
Fungal Endophytes ◽  
Antimycobacterial Activity ◽  
Great Activity ◽  
Isolation And Identification ◽  
Gram Positive Bacteria ◽  
Crude Extracts ◽  
Solanum Mauritianum ◽  
Fusarium Sp ◽  
Respective Host

Plant endophytes are microbial sources of bioactive secondary metabolites, which mimic the natural compounds chemistry of their respective host plants in a similar manner. This study explored the isolation and identification of fungal endophytes, and investigated the antibacterial and antimycobacterial activity of their crude extracts. Fungal endophytes were isolated from Solanum mauritianum, identified using morphological traits and internal transcribed spacer ribosomal-deoxyribonucleic acid (ITS-rDNA) sequence analysis. Eight fungal endophytes were identified as Aureobasidium pullulans, Paracamarosporium leucadendri, Cladosporium sp., Collectotrichum boninense, Fusarium sp., Hyalodendriella sp., and Talaromyces sp., while Penicillium chrysogenum was isolated from the leaves and unripe fruits. Good activity was observed for the crude extracts of Paracamarosporium leucadendri inhibiting Mycobacterium bovis, Klebsiella pneumoniae, and Pseudomonas aeruginosa at 6 µg/mL. Crude extracts of Fusarium sp., showed activity at 9 μg/mL against M. bovis, M. smegmatis and K. pneumonia. In general, the crude extracts showed great activity against Gram-negative and Gram-positive bacteria and novel results for two mycobacteria species M. bovis and M. smegmatis. The results provide evidence of diverse fungal endophytes isolated from Solanum mauritianum, and evidence that fungal endophytes are a good source of bioactive compounds with pharmaceutical potential, particularly against Mycobacterium tuberculosis.

scholarly journals Evaluation of Microbiological Quality of Vermicompost Prepared from Different Types of Organic Wastes using Eisenia fetida

2021 ◽  
Author(s):  
Rachna Kapila ◽  
Geeta Verma ◽  
Aparajita Sen ◽  
Arti Nigam
Keyword(s):  
Hydrolytic Enzymes ◽  
Microbiological Quality ◽  
Organic Wastes ◽  
Waste Products ◽  
Fertilizer Value ◽  
Different Types ◽  
Aspergillus Sp ◽  
Phosphate Solubilizing ◽  
Bacteria And Fungi ◽  
Rhizopus Sp

Background: Vermicomposting is the agricultural technique of conversion of organic wastes to a fertile product, which can result in better crop growth and production. However, even though earthworms are the main organisms participating in the process, the microbes associated with it also have an important role to play. These microbes degrade the waste products biochemically and are responsible of the conversion processes. Few studies are carried out on microbial diversity and related enzymes activities in the vermicompost prepared from different organic waste materials. Methods: In this paper, we isolated both bacteria and fungi from seven different types of vermicompost, using different selective media. We also studied the activity of hydrolytic enzymes that are associated with the isolated microbes.Result: It was observed that bacteria like Bacillus sp., Pseudomonas sp., Klebsiella sp., Staphylococcus aureus, Streptococcus, Micrococcus, Actinomycetes, Pigment producing Actinomycetes, Streptomyces, Azotobactor and fungi like Penicillium purpurogenum, Aspergillus sp., Alternaria alternata, Fusarium solani, Rhizopus sp., Mucor hiemalis, Myrothecium verrucaria etc. were present in our vermicompost preparations. The presence of nitrogen fixing bacteria, phosphate solubilizing microorganisms and PGPR indicated the good fertilizer value of the vermicompost samples. It was also observed that the diversity of microbes present supported significant levels of CMCase Exoglucanase, Xylanase, β-Glucosidase, Phosphatase and Urease activities.

scholarly journals SELEÇÃO IN VITRO DE FUNGOS ENDOFÍTICOS PARA O CONTROLE BIOLÓGICO DE Botrytis cinerea EM Eucalyptus benthamii

FLORESTA ◽  
2013 ◽  
Vol 43 (1) ◽  
pp. 145 ◽  
Author(s):  
José Antonio Sbravatti Junior ◽  
Celso Garcia Auer ◽  
Ida Chapaval Pimentel ◽  
Álvaro Figueredo dos Santos ◽  
Bruno Schultz
Keyword(s):  
Biological Control ◽  
Botrytis Cinerea ◽  
Fungal Endophytes ◽  
Gray Mold ◽  
Penicillium Sp ◽  
Trichoderma Sp ◽  
Forest Nurseries ◽  
Aspergillus Sp ◽  
Foliar Pathogens

   O Eucalyptus benthamii é uma das principais espécies de eucalipto plantadas na região Sul do Brasil, por sua resistência a geadas e por seu uso na produção florestal de madeira para fins energéticos. Na produção de mudas, uma das principais doenças ocorrentes em viveiros é o mofo-cinzento, causado pelo fungo Botrytis cinerea. Uma das alternativas para o controle dessa doença é o controle biológico com fungos endofíticos, os quais podem competir com os patógenos foliares de mudas de eucalipto. O objetivo deste trabalho foi isolar os fungos endofíticos provenientes de mudas de E. benthamii, identificá-los e selecioná-los para o controle de B. cinerea. Eles foram isolados do interior de tecidos vegetais desinfectados, identificados de acordo com critérios macro e micromorfológicos e classificados a partir de testes de controle biológico in vitro. Os resultados evidenciaram o potencial antagonista dos fungos Aspergillus sp., Penicillium sp. e Trichoderma sp. Nenhum desses fungos causou lesões em mudas de E. benthamii.Palavras-chave: Mofo-cinzento; eucalipto; viveiro.AbstractIn vitro selection of endophytes for biological control of Botrytis cinerea in Eucalyptus benthamii. Eucalyptus benthamii is one of the main eucalypt species planted in Southern Brazil, due to its resistance to frost and its use in the production of forest wood for energy purposes. During the production of seedlings, the main disease occurring in forest nurseries is gray-mold caused by the fungus Botrytis cinerea. One alternative for control this disease is biological control with fungal endophytes, which can compete with the foliar pathogens of eucalypt seedlings. The objective of this study was to isolate endophytic fungi from seedlings of Eucalyptus benthamii, identify and select them for B. cinerea control. These were isolated from the interior of disinfected plant tissues, identified according to macro and micromorphological criteria, and based on tests of biological control in vitro. The results revealed the potential antagonist of Aspergillus sp., Penicillium sp. and Trichoderma sp. No fungi caused lesions in E. benthamii seedlings.Keywords: Gray-mold; eucalypt; nursery.    

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