Genome-wide analysis of HSF family transcription factors and their responses to heat stress in Rosa chinensis

2020 ◽  
pp. 237-248
Author(s):  
Z.Q. Li ◽  
F.J. Zhang ◽  
C.X. Liu ◽  
S.Y. Shen ◽  
X.L. Jin ◽  
...  
Keyword(s):  
Transcription Factors ◽  
Heat Stress ◽  
Genome Wide Analysis ◽  
Rosa Chinensis ◽  
Genome Wide

Genome-wide analysis identifies chickpea (Cicer arietinum) heat stress transcription factors (Hsfs) responsive to heat stress at the pod development stage

2017 ◽  
Vol 131 (3) ◽  
pp. 525-542 ◽  
Author(s):  
Parameswaran Chidambaranathan ◽  
Prasanth Tej Kumar Jagannadham ◽  
Viswanathan Satheesh ◽  
Deshika Kohli ◽  
Santosh Halasabala Basavarajappa ◽  
...  
Keyword(s):  
Transcription Factors ◽  
Heat Stress ◽  
Cicer Arietinum ◽  
Development Stage ◽  
Genome Wide Analysis ◽  
Genome Wide ◽  
Pod Development ◽  
Pod Development Stage ◽  
Heat Stress Transcription Factors

scholarly journals Genome wide analysis of stress responsive WRKY transcription factors in Arabidopsis thaliana

2016 ◽  
Vol 4 (4) ◽  
pp. 279 ◽  
Author(s):  
Shaiq Sultan ◽  
Muhammad Amjid Ali ◽  
Rana Muhammad Atif ◽  
Farrukh Azeem ◽  
Habibullah Nadeem ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Transcription Factors ◽  
Chromosomal Localization ◽  
Evolutionary Relationship ◽  
Wrky Transcription Factors ◽  
Specific Sequence ◽  
Multiple Sequence ◽  
Genome Wide Analysis ◽  
Functional Homology ◽  
Genome Wide

WRKY transcription factors are a class of DNA-binding proteins that bind with a specific sequence C/TTGACT/C known as W-Box found in promoters of genes which are regulated by these WRKYs. From previous studies, 43 different stress responsive WRKY transcription factors in Arabidopsis thaliana, identified and then categorized in three groups viz., abiotic, biotic and both of these stresses. A comprehensive genome wide analysis including chromosomal localization, gene structure analysis, multiple sequence alignment, phylogenetic analysis and promoter analysis of these WRKY genes was carried out in this study to determine the functional homology in Arabidopsis. This analysis led to the classification of these WRKY family members into 3 major groups and subgroups and showed evolutionary relationship among these groups on the base of their functional WRKY domain, chromosomal localization and intron/exon structure. The proposed groups of these stress responsive WRKY genes and annotation based on their position on chromosomes can also be explored to determine their functional homology in other plant species in relation to different stresses. The result of the present study provides indispensable genomic information for the stress responsive WRKY transcription factors in Arabidopsis and will pave the way to explain the precise role of various AtWRKYs in plant growth and development under stressed conditions.

Genome-wide analysis of the heat stress response in Zebu (Sahiwal) cattle

Gene ◽  
2014 ◽  
Vol 533 (2) ◽  
pp. 500-507 ◽  
Author(s):  
Kusum Mehla ◽  
Ankit Magotra ◽  
Jyoti Choudhary ◽  
A.K. Singh ◽  
A.K. Mohanty ◽  
...  
Keyword(s):  
Heat Stress ◽  
Stress Response ◽  
Heat Stress Response ◽  
Genome Wide Analysis ◽  
Genome Wide ◽  
Sahiwal Cattle

scholarly journals Genome wide analysis of NLP transcription factors reveals their role in nitrogen stress tolerance of rice

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
B. Jagadhesan ◽  
Lekshmy Sathee ◽  
Hari S. Meena ◽  
Shailendra K. Jha ◽  
Viswanathan Chinnusamy ◽  
...  
Keyword(s):  
Transcription Factors ◽  
Stress Tolerance ◽  
Nitrogen Stress ◽  
Genome Wide Analysis ◽  
Genome Wide
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