scholarly journals Coupling Effects of Goat Manure and Water Management on Immobilization of Cadmium and Improvement of Bacterial Community

2022 ◽  
Author(s):  
Yiyun Liu ◽  
Yingming Xu ◽  
Qingqing Huang ◽  
Xu Qin ◽  
Lijie Zhao ◽  
...  
Keyword(s):  
Water Management ◽  
Bacterial Community ◽  
Physicochemical Properties ◽  
Soil Microbial Communities ◽  
Soil Physicochemical Properties ◽  
Water Condition ◽  
Soil Microbial ◽  
Goat Manure ◽  
Remediation Process ◽  
Amended Soil

Abstract The objective of this study was to expound possible effect of fertilization and water management in the remediation process of hazardous substance using sepiolite(SP). Meanwhile, Illumina high-throughput sequencing was performed to investigate how the composition of the rhizosphere bacterial community responded to a series of soil remediation process. The results showed that application of SP increased pH, decreased DOM under different water condition, but goat manure (GM) increased pH and DOM at the same time. Under water-saturated condition (FWHC), the application of GM increased the content of available Cd (DTPA-Cd) by 42.0-68.9%, 13.1%-30.3% of unamended and SP-amended soil, respectively. Under normal water condition (NWHC), the application of GM increased DTPA-Cd by 0.7%-5.8%, 73.7%-115.5% of unamended and SP-amended soil, respectively. Consequently, coupling effect of FWHC and GM decreased Cd content in shoots of pak choi. We also found that the application of GM increased the abundance of soil microbial communities. Abundance of proteobacteria reached a peak when applied GM in SP-amended soil under FWHC. RDA analysis showed that soil microbes such as bacteroidetes, patescibacteria, and proteobacteria were correlated positively with pH, DOM, and DTPA-Cd. Acidobacteria was correlated positively with DTPA-Cd, and negatively with pH and DOM. The relationship of soil physicochemical properties and the bacterial community variation indicated that GM and SP mixed additives may indirectly affect the soil microbial community by changing soil physicochemical properties and available Cd content.

scholarly journals Manure substitution of chemical fertilizer affect soil microbial community diversity, structure and function in greenhouse vegetable production systems

2019 ◽  
Author(s):  
Haoan Luan ◽  
Wei Gao ◽  
Shaowen Huang ◽  
Jiwei Tang ◽  
Mingyue Li ◽  
...  
Keyword(s):  
Microbial Community ◽  
Physicochemical Properties ◽  
Soil Microbial Community ◽  
Enzyme Activities ◽  
Substitution Rate ◽  
Soil Microbial Communities ◽  
Chemical Fertilizer ◽  
Soil Physicochemical Properties ◽  
Soil Microbial ◽  
Microbial Characteristics

ABSTRACTSoil microbial community and enzyme activities together affect various ecosystem functions of soils. Fertilization, as important agricultural management practices, are known to modify soil microbial characteristics; however, inconsistent results have been reported. The aim of this research therefore was to make a comparative study of the effects of different fertilization patterns (No N inputs (No N), 100% chemical fertilizer-N (CN) inputs (4/4CN) and different substitution rates of CN by organic manure-N (MN) (3/4CN+1/4MN, 2/4CN+2/4MN and 1/4CN+3/4MN)) on soil physicochemical properties, enzyme activities and microbial attributes in a GVP of Tianjin, China. Manure substitution of chemical fertilizer, especially at higher substitution rate (2/4CN+2/4MN and 1/4CN+3/4MN), improved soil physicochemical properties (higher soil organic C (SOC) and nutrient contents; lower bulk densities), promoted microbial growth (higher total phospholipid fatty acids and microbial biomass C contents) and activity (higher soil hydrolase activities). Manure addition caused a remarkable increase of the fungi/bacteria ratio and a distinct shift in the fungal (bacterial) community to greater abundance of arbuscular mycorrhizal fungi (G+ bacteria) compared with saprotrophic fungi (G− bacteria). These changes drove shifts toward fungal-dominated soil microbial communities and then optimized microbial community structure. Also, manure application increased soil biodiversity (microbial community and enzyme function), indicated by increased Shannon–Wiener diversity. Redundancy analysis indicated that the most possible mechanism of the impacts of different fertilization patterns on soil microbial characteristics may be the mediation of SOC and nutrient (N) availability (especially SOC) in this GVP of China. In conclusion, manure substitution of chemical fertilizer, especially at higher substitution rate, was more efficient for improving soil quality and biological functions.

scholarly journals Petroleum-contamination drives the shift of microbiome through modifying soil metallome

2021 ◽  
Author(s):  
Zhe Liu ◽  
Meixia Gu ◽  
Wei Zhu ◽  
Mengru Zhang ◽  
Weizhi Zhou
Keyword(s):  
Physicochemical Properties ◽  
Soil Microbial Communities ◽  
Oil Field ◽  
Total Carbon ◽  
Petroleum Contamination ◽  
Soil Physicochemical Properties ◽  
Short Term ◽  
Soil Microbial ◽  
Microbial Network ◽  
Α Diversity

Soil oil-pollution is one of the most severe environmental issues at present. Shifts of soil metallome and microbiome are essential indicators for risk assessment and remediation of field soil pollutions, but not well studied undergoing the petroleum contamination. In this research, soil samples were collected from a short-term and long-term petroleum-contaminated oil field. The soil physicochemical properties, metallome, microbial community, and polluted and unpolluted soil network were testified. Results showed that the contents of soil total petroleum hydrocarbon, total carbon, total nitrogen, total sulfur, total phosphorus, calcium, copper, manganese, lead, and zinc were increased by petroleum contamination. In contrast, the soil pH was decreased by petroleum contamination regardless of the pollution duration. Petroleum-contamination also reduced bacterial and fungal α-diversity indices. In contrast, bacterial α-diversity was negatively correlated with soil TPH and EC, and fungal α-diversity was negatively correlated with soil EC. Moreover, the relative abundances of Proteobacteria, Ascomycota, Oleibacter, and Fusarium in soil were increased by petroleum contamination. Network analysis showed that number of links, modules and the network invulnerability decreased in PS, followed by the OS group. These results demonstrate that short-term heavy petroleum contamination can cause shifts in soil physicochemical properties, metallome, and microbiome and assemble a less complex and vulnerable soil microbial network. Moreover, natural restoration can hardly amend soil properties and microbial network structure. This research emphasizes that the uncommonly studied soil metallome may play a vital part in the reaction of soil microbial communities to petroleum-contamination and potential application value of synthetic community in bioremediation.

scholarly journals Alteration of Nutrient Substrates and Absence of Seawater Due to Coastal Embankments Affects Soil Microbial Communities in Salt Marshes of Eastern China

2021 ◽  
Author(s):  
Hongyu Feng ◽  
Yajun Qiao ◽  
Lu Xia ◽  
Wen Yang ◽  
Yongqiang Zhao ◽  
...  
Keyword(s):  
Physicochemical Properties ◽  
Eastern China ◽  
Soil Microbial Communities ◽  
Soil Nutrient ◽  
Rrna Gene ◽  
Soil Physicochemical Properties ◽  
Organic C ◽  
Soil Microbial ◽  
Bacterial And Archaeal Communities ◽  
Archaeal Communities

Abstract Aims: Although the influence of coastal embankments on soil physicochemical properties and carbon (C) and nitrogen (N) cycling has been widely studied, the mechanisms of their effects on the soil microbial ecology are still poorly understood. Thus, the aim of this study was to investigate variations in soil bacterial and archaeal communities between natural and embanked saltmarshes, as well as the determinants that drive these variations.Methods: 16S rRNA gene sequence analysis was performed to assess the impacts of embankments on the bacterial and archaeal communities of the invasive Spartina alterniflora Loisel., as well as native Suaeda salsa (L.) Pall. and Phragmites australis (Cav.) Trin. ex Steud. saltmarshes in the coastal China.Results: Embankments significantly decreased the Simpson diversity index of the S. alterniflora saltmarsh, while increasing the OTU richness in the P. australis saltmarsh. Additionally, the bacterial and archaeal community compositions in the embanked S. alterniflora and P. australis saltmarshes were considerably modified. However, no variations were found between the bacterial and archaeal communities of the natural and embanked S. salsa saltmarshes.Conclusions: These results were possibly because embankments decreased the soil nutrient substrates (e.g., soil organic C and N) dramatically in the S. alterniflora saltmarsh, while increased soil nutrient substrates significantly in the P. australis saltmarsh. However, embankments had a negligible effect on the soil nutrient substrates in the S. salsa saltmarsh. Moreover, embankments increased the abundance of Betaproteobacteria, and decreased the abundance of sulfur- and sodium-dependent bacteria due to the dramatic change in soil physicochemical properties.

scholarly journals Cover Crop Species Composition Alters the Soil Bacterial Community in a Continuous Pepper Cropping System

2022 ◽  
Vol 12 ◽  
Author(s):  
Huan Gao ◽  
Gangming Tian ◽  
Muhammad Khashi u Rahman ◽  
Fengzhi Wu
Keyword(s):  
Community Structure ◽  
Bacterial Community ◽  
Faba Bean ◽  
Cover Crops ◽  
Cover Crop ◽  
Soil Microbial Communities ◽  
Cropping System ◽  
Soil Physicochemical Properties ◽  
Soil Microbial ◽  
Wild Rocket

Cover crops can improve soil biological health and alter the composition of soil microbial communities in agricultural systems. However, the effects of diversified cover crops on soil microbial communities in continuous cropping systems are unclear. Here, using different soil biochemical analysis, quantitative PCR and 16S rRNA amplicon sequencing, we investigated the effects of cover crops, alone or in mixture, on soil physicochemical properties in 2019 and 2020, and soil bacterial communities in 2020 in a continuous pepper cropping system. A field trial was established before pepper planting and eight treatments were included: fallow (no cover crop; CK); three sole cover crop treatments: wheat (Triticum aestivum L.; W), faba bean (Vicia faba L.; B), and wild rocket (Diplotaxis tenuifolia; R); and four mixed treatments: wheat + wild rocket (WR), wheat + faba bean (WB), wild rocket + faba bean (RB), and wheat + wild rocket + faba bean (WRB). The pepper yield was increased in the WR and WB in 2019 and 2020, and in the WRB in 2020. Cover crops increased the soil pH, but decreased the concentrations of NH4+ and available phosphorus. Bacterial abundance was increased by cover crop treatments, and community structure was altered in the W, WB, and WRB treatments. Moreover, we found that pH was the key factor associated with the changes in the abundance and structure of the bacterial community. Cover crop treatments altered the bacterial community structure with shifts in the dominant genera, which have plant-growth-promoting and/or pathogen-antagonistic potentials, e.g., increased the abundances of Streptomyces, Arthrobacter, and Bacillus spp. in the W and WRB, and Gaiella spp. in the WB. Overall, we found that cover crops altered the soil physicochemical properties and bacterial community, and these changes varied with species composition of the cover crops, with wheat and its combination with legumes as most effective treatments. These results suggest that the diversification within cover crops could provide better crop yield stimulatory affects by altering soil biochemical environment.

Soil physicochemical properties and bacterial community composition jointly affect crop yield

2020 ◽  
Vol 112 (5) ◽  
pp. 4358-4372
Author(s):  
Meiqi Chen ◽  
Jisheng Xu ◽  
Zengqiang Li ◽  
Bingzi Zhao ◽  
Jiabao Zhang
Keyword(s):  
Bacterial Community ◽  
Physicochemical Properties ◽  
Community Composition ◽  
Crop Yield ◽  
Bacterial Community Composition ◽  
Soil Physicochemical Properties

scholarly journals Influence of Zinc Oxide Nanoparticles on Soil Physicochemical Properties and Arachis hypogea Rhizosphere Microbial Community

2020 ◽  
pp. 88-100
Author(s):  
Progress Oghenerume ◽  
Samuel Eduok ◽  
Basil Ita ◽  
Ofonime John ◽  
Inemesit Bassey
Keyword(s):  
Zinc Oxide ◽  
Physicochemical Properties ◽  
Soil Type ◽  
Organic Matter Content ◽  
Matter Content ◽  
Phosphorus Concentration ◽  
Soil Physicochemical Properties ◽  
Amended Soils ◽  
Loam Soil ◽  
Amended Soil

We evaluated the effect of 4000 mg zinc oxide (ZnO, 99%, 30 nm) nanoparticle on the physicochemical and microbiological properties of organic manure amended ultisol and loam soil cultivated with Arachis hypogaea using standard methods. The results indicate varying effects on the physicochemical properties in relation to the soil type. The pH of the control ultisol at 7.85 ± 0.17 and 8.3 ± 0.12 in the amended ultisol whereas, the control loam was 7.15 ± 0.17 and 7.41 ± 0.11 in the amended soil indicating 1.06- and 1.04-times higher difference than the controls respectively.  Phosphorus concentration at 57.82 ± 0.54%, 50.81 ± 0.22% and 55.97 ± 0.04%, 59.97 ± 0.02% was 1.14 times lower in the ZnO amended ultisol and 1.07 times higher in amended loam soil compared to the respective controls. The organic matter content in the control and amended ultisol was 2.28 ± 0.32% and 0.91 ± 0.02%, 3.68 ± 0.36% and 0.36 ± 0.02% in the control and amended loam soil. The concentration of nitrate in the control ultisol was 0.05 ± 0.01% and 0.03 ± 0.01% in the amended soil. The nitrate in the control loam soil was 0.08 ± 0.01% relative to 0.02 ± 0.01% in the treated soil and these differences were significant at p = 0.05. The concentration of nutritive salts was reduced and in contrast iron, copper, exchangeable acids, exchange capacity, clay and silt increased in the amended soils. Further to this, heterotrophic ammonia and nitrate-oxidizing bacterial population were inhibited in the amended soils and denitrifying organisms were stimulated. The organisms were members of the genera Pseudomonas, Xanthobacter, Enterobacter, Bacillus, Lactobacillus, Citrobacter, Nitrosomonas, Agromyces and Rhizobium. ZnO nanoparticles altered the soil physicochemical properties which exacerbated the negative effect on microbial abundance and varied with the soil type.

Sign in / Sign up

Export Citation Format

Share Document