scholarly journals Isolation and phenotypic characterization of Gallibacterium anatis biovar haemolytica from a hen with hemorrhagic ooforitis

2021 ◽  
Vol 26 (6) ◽  
pp. 3090-3094
Author(s):  
IONUT SORESCU ◽  
LUMINITA MARIA ROMASCU ◽  
MARIA IONESCU ◽  
ANDREI POPOVICI ◽  
COSTIN STOICA ◽  
...  
Keyword(s):  
Antimicrobial Susceptibility ◽  
Diffusion Method ◽  
Phenotypic Characterization ◽  
Biochemical Tests ◽  
Isolation And Identification ◽  
Disk Diffusion Method ◽  
On Line ◽  
Standard Disk ◽  
Online Software

Objective: the isolation and phenotypically identification of a Gallibacterium anatis biovar haemolytica strain from a hen with hemorrhagic ooforitis; the antimicrobial susceptibility testing of this isolate. Methods and results: a strain of G. anatis biovar haemolytica, was isolated and phenotypic identified by morphological, cultural and biochemical characters examination, with API 20 E, API 20 NE, API STAPH, API ZYM tests and ABIS online software. The antimicrobial susceptibility of the isolate was performed using the standard disk diffusion method. Conclusions: a strain of G. anatis biovar haemolytica was isolated and phenotypically identified from a hen. From our knowledge, this is the first reporting in Romania of isolation and identification of G. anatis biovar haemolytica. The Gah IDSA 161 strain could be phenotypic identified only by ABIS on line software, Pasteurellaceae Database version, unifying the results of four API kits and other biochemical tests. The isolate showed a multi-drug resistant profile to tetracyclines (tetracycline, oxitetracycline, doxicyclin), floroquinolones (enrofloxacin, ciprofloxacin), ampicillin, trimethoprim, nalidixic acid, clindamycin, and it was susceptible to sulfonamide, sulfomethoxazole/trimethoprim, gentamicin, cephalothin, streptomycin, amoxicilin/clavulanic acid.

scholarly journals Clinical and bacteriological examinations of dogs with tonsillitis

2020 ◽  
Vol 23 (2) ◽  
pp. 229-236
Author(s):  
D. Sylejmani ◽  
I. Miftari ◽  
A. Hamidi ◽  
A. Robaj
Keyword(s):  
Antimicrobial Susceptibility ◽  
Clinical Signs ◽  
Penicillin G ◽  
Diffusion Method ◽  
Biochemical Tests ◽  
Isolation And Identification ◽  
Disk Diffusion Method ◽  
Staphylococcus Intermedius ◽  
Microbiological Methods ◽  
Amoxicillin Clavulanic Acid

The aim of this study was to investigate the presence of tonsillitis in dogs and isolation of bacteria involved as well as their antimicrobial susceptibility. For this purpose from June 2015 to August 2017, 12 clinical cases of dogs with tonsillitis have been examined, and a total of 24 samples were collected. Diagnosis was based on anamnesis, clinical signs, haematology and biochemical tests and bacteriological analyses. The isolation and identification of bacteria was carried out according to conventional microbiological methods and biochemical tests, while the antimicrobial susceptibility of bacterial isolates was tested using the disk diffusion method. Escherichia coli was the most commonly isolated bacteria with isolation rate 35.0%, followed by Streptococcus pyogenes (27.50%), Staphylococcus aureus (20%), Staphylococcus intermedius (10%) and Pasteurella spp. (7.5%). A high resistance to ampicillin, streptomicin and penicillin G was shown by E. coli, S. intermedius, S. pyogenes isolates. None of S. pyogenes, S. aureus, S. intermedius and Pasteurella spp., isolates was resistant to amoxicillin/clavulanic acid.

scholarly journals Prevalence, Risk Factors, and Antibiogram of Nontyphoidal Salmonella from Beef in Ambo and Holeta Towns, Oromia Region, Ethiopia

2021 ◽  
Vol 2021 ◽  
pp. 1-13
Author(s):  
Endrias Zewdu Gebremedhin ◽  
Gezahegn Tafesse Soboka ◽  
Bizunesh Mideksa Borana ◽  
Lencho Megersa Marami ◽  
Edilu Jorga Sarba ◽  
...  
Keyword(s):  
Risk Factors ◽  
Food Safety ◽  
Antimicrobial Susceptibility ◽  
Multidrug Resistant ◽  
Animal Origin ◽  
Diffusion Method ◽  
Isolation And Identification ◽  
Disk Diffusion Method ◽  
Cross Sectional ◽  
Food Of Animal Origin

Background. Salmonella has been recognized as a major cause of food-borne illness associated with the consumption of food of animal origin. The present cross-sectional study was conducted from December 2017 to May 2018 in Ambo and Holeta towns to assess the prevalence, risk factors, and antimicrobial susceptibility patterns of nontyphoidal Salmonella isolates from raw beef samples from abattoirs, butchers, and restaurants in Ambo and Holeta towns, Oromia region, Ethiopia. Methods. A total of 354 beef samples were collected from abattoirs, butchers, and restaurants. Salmonella isolation and identification were carried out using standard bacteriological methods recommended by the International Organization for Standardization. Antimicrobial susceptibility testing was performed using the disk diffusion method. Besides, a structured questionnaire was used to collect sociodemographic data and potential risk factors for contamination of meat. Chi-square tests and logistic regression were used for data analyses. Results. Of the total 354 meat samples examined, 20 (5.7%, 95% confidence interval (CI): 3.5–8.6) were positive for Salmonella. Two serotypes belonging to S. typhimurium (11 isolates) and I:4,5,12: i:- (9 isolates) were identified. The Salmonella detection rate in abattoirs, butchers, and restaurants was 4.2% (5/118), 8.5% (10/118), and 4.2% (5/118), respectively. The antimicrobial susceptibility test showed that 40%, 30%, and 20% of the Salmonella isolates were resistant to azithromycin, amoxicillin, and ceftriaxone, respectively. The odds of Salmonella isolation when meat handlers are illiterate were 7.8 times higher than those when they are educated to the level of secondary and above ( P = 0.032 ). Similarly, the likelihood of Salmonella isolation was 6.3 and 7.6 times higher among workers of butcher and restaurants, respectively, who had no training ( P = 0.003 ) and no knowledge ( P = 0.010 ) on food safety and hygiene. Conclusions. The study showed widespread multidrug-resistant Salmonella isolates in the study areas. Therefore, raw meat consumption and indiscriminate use of antimicrobial drugs should be discouraged. Provision of food safety education for meat handlers and further surveillance of antimicrobial-resistant isolates are suggested.

Occurrence and antimicrobial susceptibility ofbacterial agents of canine pyometra

2016 ◽  
Author(s):  
Afrim Hamidi ◽  
Driton Sylejmani ◽  
Avni Robaj
Keyword(s):  
Antimicrobial Susceptibility ◽  
Acquired Resistance ◽  
Clinical Signs ◽  
Diffusion Method ◽  
Isolation And Identification ◽  
Small Female ◽  
Disk Diffusion Method ◽  
Staphylococcus Intermedius ◽  
Identification Of Bacteria

The aim of this study was to investigate the occurrence of pyometra in bitches and isolation of bacteria involved and determination of their antimicrobial susceptibility. For this purpose from March 2013 to February 2015, 230 bitches of different breeds and ages have been examined. Diagnosis was based on anamnesis, clinical signs, hematology, radiography and ultrasound. The isolation and identification of bacteria in pyometra was carried out using ISO-methods and the antimicrobial susceptibility of bacterial isolates using the disk diffusion method. Canine pyometra was found more in bitches between 9-12 years old 10 cases (52.63%), and the most common dog affected breeds were small female dogs breed. The most common isolated pathogens from canine pyometra were; Escherichia coli (63.1%), Streptococcus pyogenes., (15.8%), Staphylococcus intermedius., (10.5%) and, Pseudomonas aeruginosa., (5.3%). Regarding AMR (antimicrobial resistance) Penicilin G and Ampicillin showed a very high resistance, indicating for acquired resistance due to improper und uncontrolled use.

scholarly journals Molecular Characterization of β-Lactamase Producing Genes and Integrons in Diarrheagenic Escherichia Coli From Diarrheal Children Less Than Five Years of Age in Ouagadougou, Burkina Faso.

2021 ◽  
Author(s):  
Rene Dembele ◽  
Wendpoulomdé A.D. Kaboré ◽  
Issiaka Soulama ◽  
Oumar Traoré ◽  
Nafissatou Ouédraogo ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Molecular Characterization ◽  
Resistance Genes ◽  
Antibiotic Resistance Genes ◽  
Control Measures ◽  
Diffusion Method ◽  
Biochemical Tests ◽  
Disk Diffusion Method ◽  
E Coli

Abstract Background The aim of this study was to determine the resistance of diarrheagenic Escherichia coli strains to β-lactams antibiotics and to perform the molecular characterization of Extended Spectrum β-lactamases (ESBL) and integrons genes. Methods This study was carried out from August 2013 to October 2015 and involved 31 DEC strains isolated from diarrheal stools samples collected from children less than five years of age. The identification and characterization of DEC strains was done through the standard biochemical tests those were confirmed using API 20E and Polymerase Chain Reaction (PCR). The determination of antimicrobial resistance was realized by the disk diffusion method then an amplification of the β-lactamase resistance genes and integrons by PCR was done. Results Out of the 419 E. coli strains identified, 31 isolates (7.4%) harbored the DEC virulence genes. From these DEC, 21 (67.7%) were ESBL-producing E. coli. Susceptibility to ESBL-producing E. coli showed that the majority of isolates were highly resistant to amoxicillin (77.4%), amoxicillin clavulanic acid (77.4%) and piperacillin (64.5%). The following antibiotic resistance genes and integron were identified from the 31 DEC isolates: blaTEM (6.5%), blaSHV (19.4%), blaOXA (38.7%) blaCTX−M (9.7%), Int1 (58.1%) and Int3 (19.4%). No class 2 integrons (Int2) was characterized. Conclusions Because of the high prevalence of multidrug-resistant ESBL organisms found in this study among pediatric patients, there is a need of stringent pediatric infection control measures.

scholarly journals Bacterial profiles and their antimicrobial susceptibility pattern of Isolates from inanimate hospital environments at Tikur Anbessa Specialized Teaching Hospital, Addis Ababa, Ethiopia

2020 ◽  
Author(s):  
Shemse Sebre ◽  
Woldaregay Erku ◽  
Aminu Seman ◽  
Tewachw Awoke ◽  
Zelalem Desalegn ◽  
...  
Keyword(s):  
Antimicrobial Susceptibility ◽  
Medical Equipment ◽  
Pathogenic Bacteria ◽  
Addis Ababa ◽  
Hospital Environment ◽  
Diffusion Method ◽  
Susceptibility Pattern ◽  
Biochemical Tests ◽  
Disk Diffusion Method ◽  
Antimicrobial Susceptibility Pattern

AbstractMicrobial contamination of hospital environment plays an important role in the spread of health care-associated infections (HCAIs). This study was conducted to determine bacterial contamination, bacterial profiles and antimicrobial susceptibility pattern of bacterial isolates from environmental surfaces and medical equipment. A cross-sectional study was conducted at Tikur Anbessa Specialized Hospital (TASH) from June to September, 2018. A total of 164 inanimate surfaces located at intensive care units (ICUs) and operation theaters (OTs) were swabbed. All isolates were identified by using routine bacterial culture, Gram staining and a panel of biochemical tests. For each identified bacteria, antibiogram profiles were determined by the Kirby Bauer disk diffusion method according to the guidelines of the Clinical and Laboratory Standards Institute (CLSI). Out of the 164 swabbed samples, 141 (86%) were positive for bacterial growth. The predominant bacteria identified from OTs and ICUs were S. aureus (23% vs 11.5%), Acinetobacter spp (3.8% vs 17.5%) and Coagulase negative Staphylococcus (CONS) (12.6% vs 2.7%) respectively. Linens were the most contaminated materials among items studied at the hospital (14.8%). The proportions of resistance among Gram-positive bacteria (GPB) were high for penicillin (92.8%), cefoxitin (83.5%) and erythromycin (54.1%). However, the most effective antibiotics were clindamycin with only 10.4% and 16.5% resistance rates, respectively. The antimicrobial susceptibility profiles of Gram-negative bacteria (GNB) revealed that the most effective antibiotics were amikacin, ciprofloxacin, and gentamicin with resistance rate of 25%, 37.5%, and 46.3%, respectively. However, the highest resistance was recorded against ampicillin (97.5%), ceftazidime (91.3%), ceftriaxone (91.3%) and aztreonam (90%). The inanimate surfaces near immediate patient environment and commonly touched medical equipment within OTs and ICUs are reservoirs of potential pathogenic bacteria that could predispose critically ill patients to acquire HCAIs. The proportions of antimicrobial resistance profile of the isolates are much higher from studied clean inanimate environments.

scholarly journals Identification of Extended-Spectrumβ-LactamasesEscherichia coliStrains Isolated from Market Garden Products and Irrigation Water in Benin

2015 ◽  
Vol 2015 ◽  
pp. 1-11 ◽  
Author(s):  
Wassiyath Moussé ◽  
Haziz Sina ◽  
Farid Baba-Moussa ◽  
Pacôme A. Noumavo ◽  
Nadège A. Agbodjato ◽  
...  
Keyword(s):  
Escherichia Coli ◽  
Antimicrobial Susceptibility ◽  
Irrigation Water ◽  
Food Habits ◽  
Diffusion Method ◽  
Disk Diffusion Method ◽  
E Coli ◽  
Pcr Method ◽  
Horticultural Products

The present study aimed at biochemical and molecular characterization ofEscherichia colistrains isolated from horticultural products and irrigation water of Cotonou. The samples were collected from 12 market gardeners of 4 different sites. Rapid’E. colimedium was used for identification ofE. colistrains and the antimicrobial susceptibility was performed by the agar disk diffusion method. Theβ-lactamases production was sought by the liquid acidimetric method. The genes coding forβ-lactamases and toxins were identified by PCR method. The results revealed that about 34.95% of the analyzed samples were contaminated byE. coli. Cabbages were the most contaminated byE. coli(28.26%) in dry season. All isolated strains were resistant to amoxicillin. The penicillinase producingE. colicarriedblaTEM(67.50%),blaSHV(10%), andblaCTX-M(22.50%) genes. The study revealed that the resistance genes such as SLTI (35.71%), SLTII (35.71%), ETEC (7.15%), and VTEC (21.43%) were carried. Openly to the found results and considering the importance of horticultural products in Beninese food habits, it is important to put several strategies aiming at a sanitary security by surveillance and sensitization of all the actors on the risks of some practices.

scholarly journals Antibiogram of Escherichia coli Isolated from Avian Colibacillosis in Chitwan District of Nepal

2020 ◽  
Vol 8 (1) ◽  
pp. 52-60 ◽  
Author(s):  
D.B. Thapa ◽  
A. Chapagain
Keyword(s):  
Escherichia Coli ◽  
Cross Sectional Study ◽  
Diffusion Method ◽  
Biochemical Tests ◽  
Isolation And Identification ◽  
Disk Diffusion Method ◽  
Cross Sectional ◽  
E Coli ◽  
Mar Index ◽  
Avian Disease

A cross-sectional study was conducted at National Avian Disease Investigation Laboratory, Chitwan to determine antibiogram of Escherichia coli isolated from avian colibacillosis cases of broilers and layers in Chitwan. One hundred and sixty (95 from broilers and 65 from layers) liver samples were collected aseptically during postmortem. Samples were taken purposively from dead birds showing lesions perihepatitis, pericarditis, air-saculitis, omphalitis and egg peritonitis. Isolation and identification were made by examination of cultural characteristics of E. coli in MacConkey’s agar, Eosin methylene blue (EMB) agar, Gram’s staining and biochemical tests. Antibiogram of identified E. coli isolate was evaluated against six antibiotics of six different groups by disk diffusion method following CLSI guidelines. One hundred and three E. coliisolates (73 from broilers and 30 from layers) were isolated from one hundred and sixty samples. Highest resistance was observed against Ampicillin (100%) followed by Co-trimoxazole (86.40%), Doxycycline (46.60%), Levofloxacin (45.63%), Nitrofurantoin (26.21%) and Amikacin (10.68%). Nearly about all (96.12%) isolates from 103 isolated E. coli isolates showed multidrugs resistance to two or more than two antimicrobials. All multidrug resistance isolates showed 16 different patterns with each isolate being resistance to at least two drugs. The multiple antibiotic resistance indexing ranged from 0.2 to 0.8 and proportion of isolates with MAR index greater than 0.2 was 96.12%. Int. J. Appl. Sci. Biotechnol. Vol 8(1): 52-60    

scholarly journals Isolation, Identification, and Antimicrobial Susceptibility Test of Bacteria from Vulva Swab of African Pygmy Hedgehog (Atelerix albiventris) and Sunda Porcupine (Hystrix javanica)

2021 ◽  
Vol 33 ◽  
pp. 06009
Author(s):  
Anindya Dwi Ash-Santri ◽  
Vinsa Cantya Prakasita ◽  
Yosua Kristian Adi ◽  
Teguh Budipitojo ◽  
Agnesia Endang Tri Hastuti Wahyuni
Keyword(s):  
Escherichia Coli ◽  
Antimicrobial Susceptibility ◽  
Proteus Mirabilis ◽  
Susceptibility Test ◽  
Penicillin G ◽  
Diffusion Method ◽  
Antimicrobial Susceptibility Test ◽  
Biochemical Tests ◽  
Disk Diffusion Method ◽  
Selective Media

Atelerix albiventris and Hystrix javanica are currently traded as pets or consumed in Indonesia, but there has been no research about bacteria from the vulva swab before. This research aims to isolate and identify bacteria from the vulva swabs of Atelerix albiventris and Hystrix javanica, and identify their antibiotic susceptibility. Samples were isolated by blood agar plates and selective media and identified by biochemical tests. Kirby Bauer’s disk diffusion method was used for the antimicrobial susceptibility test. The result showed that from Atelerix albiventris was isolated and identified Escherichia coli and Proteus mirabilis, while from Hystrix javanica was isolated and identified Escherichia coli. The identified Escherichia coli was sensitive to Amikacin, Amoxycillin, Ampicillin, Enrofloxacin, Fosfomycin, Chloramphenicol, Tetracycline, Trimethoprim, and Kanamycin; intermediate to Streptomycin; and resistant to Erythromycin and Penicillin G. The identified Proteus mirabilis was sensitive to Amikacin, Amoxycillin, Kanamycin, Enrofloxacin, and Fosfomycin; and resistant to Erythromycin, Penicillin G, Streptomycin, Ampicillin, Chloramphenicol, Tetracycline, and Trimethoprim. This research concludes that Escherichia coli and Proteus mirabilis were isolated from vulva swab of Atelerix albiventris and Hystrix javanica, Escherichia coli was sensitive to eight antibiotics, while Proteus mirabilis was sensitive to five antibiotics.

scholarly journals Antibiotic Susceptibility Pattern of Clinical Isolates of Escherichia coli at a Tertiary Care Hospital

KYAMC Journal ◽  
2017 ◽  
Vol 7 (1) ◽  
pp. 681-686
Author(s):  
Md Shakhaowat Hossain ◽  
Rehana Khatun ◽  
Mohammed Solayman ◽  
Babul Aktar ◽  
Abdullah Akhtar Ahmed
Keyword(s):  
Escherichia Coli ◽  
Antimicrobial Susceptibility ◽  
Tertiary Care ◽  
Clinical Isolates ◽  
Penicillin G ◽  
Diffusion Method ◽  
Care Hospital ◽  
Isolation And Identification ◽  
Disk Diffusion Method ◽  
Tract Infections

Infections due to multidrug resistant E.coli range from uncomplicated urinary tract infections to life-threatening sepsis. A retrospective study was conducted to determine the patterns of antimicrobial susceptibility in 173 (12.84%) Escherichia coli strains isolated from 1347 clinical specimens of different types. Isolation and identification of E.coli were done as per routine laboratory protocol directed by Cheesbrough1. The isolation rate of E.coli was 48.57% in stool followed by 17.68% in urine, 25% in wound swabs, and 15.38% in tracheal aspirate etc. Among the 173 isolates 102 (59%) were from males and 71 (41%) were from females. Patients were classified into five age groups: 0-15, 16-30, 31-45, 46-60 and >60 years. E.coli was found highest number in females (13.9%) of age range 31-45 years and in males (22%) belonged to age group of over 60 years. Antimicrobial susceptibility testing by the disk diffusion method was conducted for 22 different antibiotics. The majority of isolated E.coli were highly sensitive to Imipenem (98.18%), Meropenem (97.37%), Amikacin (91.67%), Amoxiclav (80%), Ceftazidime (73.33%), and Gentamycin (71.76%). The antibiotics Tobramycin and Azithromycin were found as moderately sensitive against E.coli with the susceptibility rate of 52.5% and 50% respectively. The isolates show low degree of susceptibility to Penicillin G (9.52%), Carbenicillin (10%), Erythromycin (19.48%), Amoxycillin (19.59%), and Ampicillin (25%). These findings have clinical and epidemiological significance and provide a benchmark for future studies on the pattern of susceptibility of clinical isolates of E.coli in this region as well as may help the clinician to prescribe the right empirical treatment.KYAMC Journal Vol. 7, No.-1, Jul 2016, Page 681-686

scholarly journals Streptococcal Throat Carriage among Primary School Children Living in Uyo, Southern Nigeria

2021 ◽  
Vol 11 (01) ◽  
pp. e28-e34
Author(s):  
Kevin B. Edem ◽  
Enobong E. Ikpeme ◽  
Mkpouto U. Akpan
Keyword(s):  
Primary School ◽  
School Children ◽  
Antimicrobial Susceptibility ◽  
Group A Streptococcus ◽  
Latex Agglutination ◽  
Sub Saharan Africa ◽  
Primary School Children ◽  
Diffusion Method ◽  
Disk Diffusion Method ◽  
Cross Sectional

AbstractSurveillance of the carrier state for β-hemolytic streptococcal (BHS) throat infections remains essential for disease control. Recent published works from Sub-Saharan Africa have suggested a changing epidemiology in the burden of BHS throat infections. The objective of the present study was therefore to determine the prevalence and pattern of BHS throat carriage in school-aged children in Uyo, Akwa Ibom State. This was a prospective cross-sectional study of 276 primary school children in Uyo. Subjects were recruited by multistage random sampling. Obtained throat swabs were cultured on 5% sheep blood agar. Lancefield grouping on positive cultures was done by using the Oxoid Streptococcal Grouping Latex Agglutination Kit, United Kingdom. Antimicrobial susceptibility testing was done with the disk diffusion method. Associations were tested with Fischer's exact test. The prevalence of BHS carriage was 3.3%. Group C Streptococcus was identified in 89% of isolates and Group G Streptococcus in 11%. Younger age and larger household size were associated with asymptomatic streptococcal throat infections. Antimicrobial susceptibility was highest with cefuroxime and clindamycin (89% of isolates each), while 78% of isolates were susceptible to penicillin. None of the tested isolates was susceptible to co-trimoxazole. The prevalence of streptococcal throat carriage in the study area was low. There were no Group A Streptococcus isolates suggesting an evolving epidemiology of BHS disease in the study area.

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