scholarly journals Allosteric regulation of bacterial Enzyme I: Toward the discovery of a new class of antimicrobial compounds

2021 ◽  
Author(s):  
Trang Truc Nguyen
2015 ◽  
Vol 6 (1) ◽  
Author(s):  
Vincenzo Venditti ◽  
Vitali Tugarinov ◽  
Charles D. Schwieters ◽  
Alexander Grishaev ◽  
G. Marius Clore
Keyword(s):  

2020 ◽  
Vol 432 (16) ◽  
pp. 4481-4498 ◽  
Author(s):  
Rochelle R. Dotas ◽  
Trang T. Nguyen ◽  
Charles E. Stewart ◽  
Rodolfo Ghirlando ◽  
Davit A. Potoyan ◽  
...  

Antibiotics ◽  
2020 ◽  
Vol 9 (7) ◽  
pp. 369
Author(s):  
Tuomo Laitinen ◽  
Ilia V. Baranovsky ◽  
Lidia S. Konstantinova ◽  
Antti Poso ◽  
Oleg A. Rakitin ◽  
...  

We report our investigations into the underlying differences between 1,2,3-dithiazole and their ultra-rare counterpart, 1,2,3-thiaselenazole. This rare 1,2,3-thiaselenazole chemotype was afforded by sulfur extrusion and selenium insertion into the preconstructed 1,2,3-dithiazoles. We built a library of matched paired compounds to compare and contrast the two ring systems. This led to the development of both narrow and broad-spectrum antimicrobial compounds with sub-micro molar potency, limited to no toxicity and a further understanding of the transition state electronics through molecular simulations. We also identified the potent 4,5,6-trichlorocyclopenta[d][1,2,3]thiaselenazole 11a, for use against Candida albicans, Cryptococcus neoformans var. grubii, Staphylococcus aureus and Acinetobacter baumannii, all of which have limited clinical treatment options. The 1,2,3-thiaselenazole represents a new class of potential compounds for the treatment of a host of multi-resistant hospital derived infections.


2015 ◽  
Vol 197 (7) ◽  
pp. 1157-1163 ◽  
Author(s):  
Katie Glenn ◽  
Kerry S. Smith

ABSTRACTXylulose 5-phosphate/fructose 6-phosphate phosphoketolase (Xfp), which catalyzes the conversion of xylulose 5-phosphate (X5P) or fructose 6-phosphate (F6P) to acetyl phosphate, plays a key role in carbohydrate metabolism in a number of bacteria. Recently, we demonstrated that the fungalCryptococcus neoformansXfp2 exhibits both substrate cooperativity for all substrates (X5P, F6P, and Pi) and allosteric regulation in the forms of inhibition by phosphoenolpyruvate (PEP), oxaloacetic acid (OAA), and ATP and activation by AMP (K. Glenn, C. Ingram-Smith, and K. S. Smith. Eukaryot Cell13:657–663, 2014). Allosteric regulation has not been reported previously for the characterized bacterial Xfps. Here, we report the discovery of substrate cooperativity and allosteric regulation among bacterial Xfps, specifically theLactobacillus plantarumXfp.L. plantarumXfp is an allosteric enzyme inhibited by PEP, OAA, and glyoxylate but unaffected by the presence of ATP or AMP. Glyoxylate is an additional inhibitor to those previously reported forC. neoformansXfp2. As withC. neoformansXfp2, PEP and OAA share the same or possess overlapping sites onL. plantarumXfp. Glyoxylate, which had the lowest half-maximal inhibitory concentration of the three inhibitors, binds at a separate site. This study demonstrates that substrate cooperativity and allosteric regulation may be common properties among bacterial and eukaryotic Xfp enzymes, yet important differences exist between the enzymes in these two domains.IMPORTANCEXylulose 5-phosphate/fructose 6-phosphate phosphoketolase (Xfp) plays a key role in carbohydrate metabolism in a number of bacteria. Although we recently demonstrated that the fungalCryptococcusXfp is subject to substrate cooperativity and allosteric regulation, neither phenomenon has been reported for a bacterial Xfp. Here, we report that theLactobacillus plantarumXfp displays substrate cooperativity and is allosterically inhibited by phosphoenolpyruvate and oxaloacetate, as is the case forCryptococcusXfp. The bacterial enzyme is unaffected by the presence of AMP or ATP, which act as a potent activator and inhibitor of the fungal Xfp, respectively. Our results demonstrate that substrate cooperativity and allosteric regulation may be common properties among bacterial and eukaryotic Xfps, yet important differences exist between the enzymes in these two domains.


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