scholarly journals U-shaped GAN for Semi-Supervised Learning and Unsupervised Domain Adaptation in High Resolution Chest Radiograph Segmentation

2022 ◽  
Vol 8 ◽  
Author(s):  
Hongyu Wang ◽  
Hong Gu ◽  
Pan Qin ◽  
Jia Wang

Deep learning has achieved considerable success in medical image segmentation. However, applying deep learning in clinical environments often involves two problems: (1) scarcity of annotated data as data annotation is time-consuming and (2) varying attributes of different datasets due to domain shift. To address these problems, we propose an improved generative adversarial network (GAN) segmentation model, called U-shaped GAN, for limited-annotated chest radiograph datasets. The semi-supervised learning approach and unsupervised domain adaptation (UDA) approach are modeled into a unified framework for effective segmentation. We improve GAN by replacing the traditional discriminator with a U-shaped net, which predicts each pixel a label. The proposed U-shaped net is designed with high resolution radiographs (1,024 × 1,024) for effective segmentation while taking computational burden into account. The pointwise convolution is applied to U-shaped GAN for dimensionality reduction, which decreases the number of feature maps while retaining their salient features. Moreover, we design the U-shaped net with a pretrained ResNet-50 as an encoder to reduce the computational burden of training the encoder from scratch. A semi-supervised learning approach is proposed learning from limited annotated data while exploiting additional unannotated data with a pixel-level loss. U-shaped GAN is extended to UDA by taking the source and target domain data as the annotated data and the unannotated data in the semi-supervised learning approach, respectively. Compared to the previous models dealing with the aforementioned problems separately, U-shaped GAN is compatible with varying data distributions of multiple medical centers, with efficient training and optimizing performance. U-shaped GAN can be generalized to chest radiograph segmentation for clinical deployment. We evaluate U-shaped GAN with two chest radiograph datasets. U-shaped GAN is shown to significantly outperform the state-of-the-art models.

Sensors ◽  
2021 ◽  
Vol 21 (1) ◽  
pp. 268
Author(s):  
Yeganeh Jalali ◽  
Mansoor Fateh ◽  
Mohsen Rezvani ◽  
Vahid Abolghasemi ◽  
Mohammad Hossein Anisi

Lung CT image segmentation is a key process in many applications such as lung cancer detection. It is considered a challenging problem due to existing similar image densities in the pulmonary structures, different types of scanners, and scanning protocols. Most of the current semi-automatic segmentation methods rely on human factors therefore it might suffer from lack of accuracy. Another shortcoming of these methods is their high false-positive rate. In recent years, several approaches, based on a deep learning framework, have been effectively applied in medical image segmentation. Among existing deep neural networks, the U-Net has provided great success in this field. In this paper, we propose a deep neural network architecture to perform an automatic lung CT image segmentation process. In the proposed method, several extensive preprocessing techniques are applied to raw CT images. Then, ground truths corresponding to these images are extracted via some morphological operations and manual reforms. Finally, all the prepared images with the corresponding ground truth are fed into a modified U-Net in which the encoder is replaced with a pre-trained ResNet-34 network (referred to as Res BCDU-Net). In the architecture, we employ BConvLSTM (Bidirectional Convolutional Long Short-term Memory)as an advanced integrator module instead of simple traditional concatenators. This is to merge the extracted feature maps of the corresponding contracting path into the previous expansion of the up-convolutional layer. Finally, a densely connected convolutional layer is utilized for the contracting path. The results of our extensive experiments on lung CT images (LIDC-IDRI database) confirm the effectiveness of the proposed method where a dice coefficient index of 97.31% is achieved.


2018 ◽  
Vol 10 (11) ◽  
pp. 1768 ◽  
Author(s):  
Hui Yang ◽  
Penghai Wu ◽  
Xuedong Yao ◽  
Yanlan Wu ◽  
Biao Wang ◽  
...  

Building extraction from very high resolution (VHR) imagery plays an important role in urban planning, disaster management, navigation, updating geographic databases, and several other geospatial applications. Compared with the traditional building extraction approaches, deep learning networks have recently shown outstanding performance in this task by using both high-level and low-level feature maps. However, it is difficult to utilize different level features rationally with the present deep learning networks. To tackle this problem, a novel network based on DenseNets and the attention mechanism was proposed, called the dense-attention network (DAN). The DAN contains an encoder part and a decoder part which are separately composed of lightweight DenseNets and a spatial attention fusion module. The proposed encoder–decoder architecture can strengthen feature propagation and effectively bring higher-level feature information to suppress the low-level feature and noises. Experimental results based on public international society for photogrammetry and remote sensing (ISPRS) datasets with only red–green–blue (RGB) images demonstrated that the proposed DAN achieved a higher score (96.16% overall accuracy (OA), 92.56% F1 score, 90.56% mean intersection over union (MIOU), less training and response time and higher-quality value) when compared with other deep learning methods.


2021 ◽  
pp. 201-210
Author(s):  
Guodong Zeng ◽  
Till D. Lerch ◽  
Florian Schmaranzer ◽  
Guoyan Zheng ◽  
Jürgen Burger ◽  
...  

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