scholarly journals Butterfly Community Diversity in the Qinling Mountains

Diversity ◽  
2022 ◽  
Vol 14 (1) ◽  
pp. 27
Author(s):  
Jinze Ren ◽  
Shuying Li ◽  
Mengdi He ◽  
Yalin Zhang
Keyword(s):  
Environmental Changes ◽  
Community Diversity ◽  
Systematic Research ◽  
Butterfly Species ◽  
Qinling Mountains ◽  
Alpha And Beta Diversity ◽  
Mountain Ranges ◽  
Butterfly Diversity ◽  
Structure Changes ◽  
Significant Difference

The Qinling Mountains are one of the oldest mountain ranges in China and a global biodiversity research and conservation hotspot. However, there is a lack of systematic research and survey of butterfly diversity in this region. Based on the butterfly taxa, combined with the changes in natural climate, altitude gradient and season in the Qinling Mountains, the butterfly diversity and community structure changes in 12 counties in the middle Qinling Mountains were analyzed by transect surveys and platform data analyses. A total of 9626 butterflies were observed, belonging to 427 species across 175 genera and 5 families. The species richness on the southern slope of the Qinling Mountains was higher than on the northern slope. We also studied the variation in alpha and beta diversity of butterflies. The results show that butterfly species were abundant and the highest diversity was found at the middle altitudes (1000–2000 m). Moreover, there were obvious seasonal differences in both species and number of butterflies. The community similarity in spring, summer and autumn was low, with limited species co-existing. The butterflies in the Qinling Mountains reserve area were the most abundant, exhibiting no significant difference with those in the ecotone and the farm area. Finally, we did an assessment of butterflies as endangered and protected species. In conclusion, our long-term butterfly survey data show that human disturbance and climate and environmental changes jointly shape the butterfly diversity in the middle of the Qinling Mountains.

The environmental niche of soil bacterial, archaeal, fungal and protist communities differ along edaphic and topoclimatic gradients in the Alps

2021 ◽  
Author(s):  
Lucie A Malard ◽  
Heidi K Mod ◽  
Nicolas Guex ◽  
Olivier Broennimann ◽  
Erika Yashiro ◽  
...  
Keyword(s):  
Niche Breadth ◽  
Environmental Changes ◽  
Environmental Gradients ◽  
Community Diversity ◽  
Environmental Niche ◽  
Alpha And Beta Diversity ◽  
Niche Concept ◽  
The Alps ◽  
Microbial Groups ◽  
Taxonomic Groups

Abstract BackgroundThe niche concept describes the range of conditions supporting the establishment and persistence of species in the environment. Although widely used in ecology, it has not been often applied to microbes, for which comparative niche analyses are still lacking. Yet, quantifying the niche of microbial taxa is necessary to forecast how taxa and the communities they compose might respond to environmental changes. In this study, we identified important topoclimatic, edaphic, spatial and biotic drivers of the alpha and beta diversity of bacterial, archaeal, fungal and protist communities. Then, we established a method to calculate the niche breadth and position of each taxon along environmental gradients to determine whether microorganisms have distinct environmental niches. ResultsFor all microbial groups, edaphic properties were identified as the most important drivers of both community diversity and composition. Protists presented the largest niche breadths, followed by bacteria and archaea, with fungi displaying the smallest. Niche breadth generally decreased towards environmental extremes, especially along edaphic gradients, suggesting increased specialisation of all microbial taxa in highly selective environments. ConclusionIn this study, we showed that microorganisms have well defined niches, as do macro-organisms, and that these likely drive part of the observed spatial patterns of community variations, but with notable differences among taxonomic groups. Applying the niche concept more widely to microbial ecology should open many novel perspectives, especially to tackle global change challenges.

scholarly journals Comparative analysis of diversity and environmental niches of soil bacterial, archaeal, fungal and protist communities reveal niche divergences along environmental gradients in the Alps

2021 ◽  
Author(s):  
Lucie A Malard ◽  
Heidi K Mod ◽  
Nicolas Guex ◽  
Olivier Broennimann ◽  
Erika Yashiro ◽  
...  
Keyword(s):  
Niche Breadth ◽  
Environmental Changes ◽  
Environmental Gradients ◽  
Community Diversity ◽  
Alpha And Beta Diversity ◽  
Niche Variation ◽  
The Alps ◽  
Microbial Groups ◽  
Taxonomic Groups ◽  
Edaphic Gradients

Abstract Although widely used in ecology, comparative analyses of diversity and niche properties are still lacking for microorganisms, especially concerning niche variations. In this study, we identified important topoclimatic, edaphic, spatial and biotic drivers of the alpha and beta diversity of bacterial, archaeal, fungal and protist communities. Then, we calculated the niche breadth and position of each taxon along environmental gradients within all taxonomic groups, to determine how these vary within and between groups. Quantifying the niches of microbial taxa is necessary to then forecast how taxa and the communities they compose might respond to environmental changes. We found that edaphic properties were the most important drivers of both community diversity and composition for all microbial groups. Protists presented the largest niche breadths, followed by bacteria and archaea, with fungi displaying the smallest. Niche breadth generally decreased towards environmental extremes, especially along edaphic gradients, suggesting increased specialisation of microbial taxa in highly selective environments. Overall, we showed that microorganisms have well defined niches, as do macro-organisms, likely driving part of the observed spatial patterns of community variations. Assessing niche variation more widely in microbial ecology should open new perspectives, especially to tackle global change effects on microbes.

scholarly journals Untargeted In Silico Compound Classification—A Novel Metabolomics Method to Assess the Chemodiversity in Bryophytes

2021 ◽  
Vol 22 (6) ◽  
pp. 3251
Author(s):  
Kristian Peters ◽  
Gerd Balcke ◽  
Niklas Kleinenkuhnen ◽  
Hendrik Treutler ◽  
Steffen Neumann
Keyword(s):  
In Silico ◽  
Structural Integrity ◽  
Environmental Changes ◽  
Light Availability ◽  
Biotic Interactions ◽  
Plant Ecology ◽  
Chemical Diversity ◽  
Classification Framework ◽  
Significant Difference ◽  
Compound Classification

In plant ecology, biochemical analyses of bryophytes and vascular plants are often conducted on dried herbarium specimen as species typically grow in distant and inaccessible locations. Here, we present an automated in silico compound classification framework to annotate metabolites using an untargeted data independent acquisition (DIA)–LC/MS–QToF-sequential windowed acquisition of all theoretical fragment ion mass spectra (SWATH) ecometabolomics analytical method. We perform a comparative investigation of the chemical diversity at the global level and the composition of metabolite families in ten different species of bryophytes using fresh samples collected on-site and dried specimen stored in a herbarium for half a year. Shannon and Pielou’s diversity indices, hierarchical clustering analysis (HCA), sparse partial least squares discriminant analysis (sPLS-DA), distance-based redundancy analysis (dbRDA), ANOVA with post-hoc Tukey honestly significant difference (HSD) test, and the Fisher’s exact test were used to determine differences in the richness and composition of metabolite families, with regard to herbarium conditions, ecological characteristics, and species. We functionally annotated metabolite families to biochemical processes related to the structural integrity of membranes and cell walls (proto-lignin, glycerophospholipids, carbohydrates), chemical defense (polyphenols, steroids), reactive oxygen species (ROS) protection (alkaloids, amino acids, flavonoids), nutrition (nitrogen- and phosphate-containing glycerophospholipids), and photosynthesis. Changes in the composition of metabolite families also explained variance related to ecological functioning like physiological adaptations of bryophytes to dry environments (proteins, peptides, flavonoids, terpenes), light availability (flavonoids, terpenes, carbohydrates), temperature (flavonoids), and biotic interactions (steroids, terpenes). The results from this study allow to construct chemical traits that can be attributed to biogeochemistry, habitat conditions, environmental changes and biotic interactions. Our classification framework accelerates the complex annotation process in metabolomics and can be used to simplify biochemical patterns. We show that compound classification is a powerful tool that allows to explore relationships in both molecular biology by “zooming in” and in ecology by “zooming out”. The insights revealed by our framework allow to construct new research hypotheses and to enable detailed follow-up studies.

Parnassius nebrodensis: A threatened but neglected Apollo butterfly species from Southern Europe (Lepidoptera: Papilionidae)

2021 ◽  
Vol 40 ◽  
pp. 140-163
Author(s):  
Ivan N. Bolotov ◽  
Mikhail Y. Gofarov ◽  
Vyacheslav V. Gorbach ◽  
Yulia S. Kolosova ◽  
Alisa A. Zheludkova ◽  
...  
Keyword(s):  
Population Decline ◽  
Western Mediterranean ◽  
Butterfly Species ◽  
Isolated Populations ◽  
Nucleotide Substitutions ◽  
Mitochondrial Coi ◽  
Mountain Ranges ◽  
Cryptic Species Complex ◽  
Phylogenetic Lineages ◽  
Apollo Butterfly

Recent multi-locus phylogenetic studies repeatedly showed that what was thought to be the Clouded Apollo butterfly Parnassius mnemosyne (Linnaeus, 1758) represents a cryptic species complex. This complex contains at least three distant species-level phylogenetic lineages. Here, we compile a set of morphology- and DNA-based evidences supporting the distinctiveness of two species in this group, i.e. P. mnemosyne s. str. and P. nebrodensis Turati, 1907 stat. rev. These species can be distinguished from each other based on a combination of diagnostic characters in the male genitalia structure, wing scale patterns, and the forewing venation. The species status of P. nebrodensis is supported based on unique nucleotide substitutions in the mitochondrial (COI, ND1, and ND5) and nuclear (Wg and EF-1a) genes. P. nebrodensis is endemic to the Western Mediterranean Region. This species shares a disjunctive range through the Pyrenees, Western and Central Alps, Apennines, and the Nebrodi and Madonie mountains on Sicily. Altogether 38 nominal taxa initially described as P. mnemosyne subspecies are considered here to be junior synonyms of P. nebrodensis. At first glance, P. nebrodensis can be assessed as an endangered species due to its restricted distribution, narrow range of habitats, and ongoing population decline. Isolated populations of this species scattered through mountain ranges need special management and conservation efforts.

War yesterday and today: The image of Russia in British media discourse

2021 ◽  
Vol 25 (3) ◽  
pp. 723-745
Author(s):  
Olga A. Solopova ◽  
Svetlana L. Kushneruk
Keyword(s):  
Systematic Research ◽  
Media Discourse ◽  
Spiritual Values ◽  
Framing Analysis ◽  
War And Peace ◽  
Significant Difference ◽  
Negative Images ◽  
Diachronic Analysis ◽  
Foreign Media ◽  
Media Discourses

The paper focuses on diachronic framing analysis of Russias images in British media discourse. The importance of the research is determined by a need to work out adequate linguistic foundations to counteract information war, generated by some foreign media and aimed at distorting Russias history and eroding its spiritual values. Few scholars have drawn on any systematic research into analysis of Russias images in foreign media discourses of different historical spans. The major objective is to compare Russias images and their emotional charge in the British media in chronologically divided periods of war and peace under the influence of changing historical and ideological factors. The authors account for the mechanisms by which Russias images are framed and transformed in the contexts of the largest war of the XX century and the information war of the XXI century. The material comprises 500 samples per period. The data covering two historical spans are investigated through a framing approach. The criteria for diachronic analysis are dominant diagnostic and prognostic frames, constituting the macroframe WAR. The significant difference in Russias images in war- and peacetime consists in their emotive load: Russias contemporary negative images are contrasted to positive images activated in the retrospective period. The findings support the idea that British media discourse focusing on Russia is subject-centered: Russias image is determined by the geopolitical situation, Great Britains political priorities and objectives, and the bilateral relationship between the countries. The results can be used to further develop the linguistic basics of war theory.

scholarly journals Environmental Temperatures Affect the Gastrointestinal Microbes of the Chinese Giant Salamander

2021 ◽  
Vol 12 ◽  
Author(s):  
Lifeng Zhu ◽  
Wei Zhu ◽  
Tian Zhao ◽  
Hua Chen ◽  
Chunlin Zhao ◽  
...  
Keyword(s):  
Potential Effect ◽  
Shannon Index ◽  
Effect Of Temperature ◽  
Sample Type ◽  
Gastrointestinal Microbiome ◽  
Unifrac Distance ◽  
Alpha And Beta Diversity ◽  
Significant Difference ◽  
Unweighted Unifrac ◽  
Sample Time

An increasing number of studies have shown that warming also influences the animal gut microbiome (altering the community structure and decreasing its diversity), which might further impact host fitness. Here, based on an analysis of the stomach and gut (the entire intestine: from the anterior intestine to the cloaca) microbiome in laboratory larva of giant salamanders (Andrias davidianus) under different living water temperatures (5, 15, and 25°C) at two sample time points (80 and 330 days after the acclimation), we investigated the potential effect of temperature on the gastrointestinal microbiome community. We found the significant Interaction between sampling time and temperature, or type (stomach and gut) on Shannon index in the gastrointestinal microbiome of the giant salamanders. We also found the significant difference in Shannon index among temperature groups within the same sample type (stomach or gut) at each sample time. 10% of variation in microbiome community could be explained by temperature alone in the total samples. Both the stomach and gut microbiomes displayed the highest similarity in the microbiome community (significantly lowest pairwise unweighted Unifrac distance) in the 25-degree group between the two sampling times compared to those in the 5-degree and 15-degree groups. Moreover, the salamanders in the 25°C treatment showed the highest food intake and body mess compared to that of other temperature treatments. A significant increase in the abundance of Firmicutes in the gastrointestinal microbiome on day 330 with increasing temperatures might be caused by increased host metabolism and food consumption. Therefore, we speculate that the high environmental temperature might indirectly affect both alpha and beta diversity of the gastrointestinal microbiome.

scholarly journals Changes in Adherence to the 24-Hour Movement Guidelines and Overweight and Obesity among Children in Northeastern Japan: A Longitudinal Study before and during the COVID-19 Pandemic

Obesities ◽  
2021 ◽  
Vol 1 (3) ◽  
pp. 167-177
Author(s):  
Hyunshik Kim ◽  
Jiameng Ma ◽  
Junghoon Kim ◽  
Daolin Xu ◽  
Sunkyoung Lee
Keyword(s):  
Environmental Changes ◽  
Preventive Measures ◽  
Overweight And Obesity ◽  
Health Programs ◽  
Average Body Mass Index ◽  
Northeastern Japan ◽  
Significant Difference ◽  
Community Health Programs ◽  
Average Body Mass ◽  
Average Body

There are few studies comparing adherence to Canadian 24-hour Movement Guidelines (24-h MG) before and during the COVID-19 pandemic and exploring the pandemic’s effect on childhood obesity. This survey-based 2-year study investigated changes in obesity and adherence to the 24-h MG in children before and during the COVID-19 pandemic. Data were collected at two points in time: pre-COVID-19 (May 2019; T1; n = 247) and during-COVID-19 (May 2021; T2; n = 171). Participants were healthy elementary school children aged between 6–12 years in northeastern Japan. The questionnaire comprised items on physical activity, screen time, sleep duration, adherence to the 24-h MG, and anthropometric and demographic characteristics. Among all participants, a statistically significant difference (p < 0.001) between the average body mass index at T1 (M = 16.06 kg/m2, SD = 2.08 kg/m2) and T2 (M = 18.01 kg/m2, SD = 3.21 kg/m2) was observed, where 17.8% were overweight and obese at T1 and 24% at T2, and 10.9% adhered to all 24 h MG at T1 and 4.1% at T2. To prevent obesity in children during the COVID-19 pandemic, environmental changes should be evaluated and appropriate preventive measures taken, including pro-community health programs that encourage parent-children outdoor activities.

scholarly journals Butterfly diversity in heterogeneous habitat of Bankura, West Bengal, India

2020 ◽  
Vol 12 (8) ◽  
pp. 15804-15816
Author(s):  
Kalyan Mukherjee ◽  
Ayan Mondal
Keyword(s):  
West Bengal ◽  
Diversity Indices ◽  
Species Number ◽  
Butterfly Species ◽  
Gangetic Plain ◽  
Butterfly Diversity ◽  
Heterogeneous Habitats ◽  
Heterogeneous Habitat ◽  
Chotanagpur Plateau ◽  
Bankura District

Butterfly diversity was observed in different habitats of Bankura District, West Bengal, India.  This district is located at the junction of Chotanagpur plateau and Gangetic plain; it contains a variety of transitional habitats.  We found 117 butterfly species from our covered survey area.  The highest species recorded in the present study belonged to family Lycaenidae (30.76%) and Nymphalidae (29.91%) followed by Hesperiidae (16.23%), Pieridae (13.67%), Papilionidae (8.54%), and Riodinidae (0.85%), respectively.  Based on sighting we found that 12.82% of all the butterflies recorded were abundant in nature while 21.36% were very common, 41.88% were frequent, and 23.93% were rare. Cluster analysis and other diversity indices gives us an overall idea about environmental health.  The pattern of diversity change from plain to plateau gradient gives important insight about ecological edge effect.  High species number in relation with low individual numbers were found in forest habitat.  This preliminary study showed that heterogeneous habitats could harbour many butterflies and need proper conservation efforts to sustain it. 

scholarly journals Gut bacterial microbiota in patients with myasthenia gravis: results from the MYBIOM study

2021 ◽  
Vol 14 ◽  
pp. 175628642110356
Author(s):  
Andreas Totzeck ◽  
Elakiya Ramakrishnan ◽  
Melina Schlag ◽  
Benjamin Stolte ◽  
Kathrin Kizina ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Myasthenia Gravis ◽  
Healthy Volunteers ◽  
Alpha Diversity ◽  
Diversity Indices ◽  
Rrna Gene ◽  
Pilot Studies ◽  
Variable Regions ◽  
Alpha And Beta Diversity ◽  
Significant Difference

Background: Myasthenia gravis (MG) is an autoimmune neuromuscular disease, with gut microbiota considered to be a pathogenetic factor. Previous pilot studies have found differences in the gut microbiota of patients with MG and healthy individuals. To determine whether gut microbiota has a pathogenetic role in MG, we compared the gut microbiota of patients with MG with that of patients with non-inflammatory and inflammatory neurological disorders of the peripheral nervous system (primary endpoint) and healthy volunteers (secondary endpoint). Methods: Faecal samples were collected from patients with MG ( n = 41), non-inflammatory neurological disorder (NIND, n = 18), chronic inflammatory demyelinating polyradiculoneuropathy (CIDP, n = 6) and healthy volunteers ( n = 12). DNA was isolated from these samples, and the variable regions of the 16S rRNA gene were sequenced and statistically analysed. Results: No differences were found in alpha- and beta-diversity indices computed between the MG, NIND and CIDP groups, indicating an unaltered bacterial diversity and structure of the microbial community. However, the alpha-diversity indices, namely Shannon, Chao 1 and abundance-based coverage estimators, were significantly reduced between the MG group and healthy volunteers. Deltaproteobacteria and Faecalibacterium were abundant within the faecal microbiota of patients with MG compared with controls with non-inflammatory diseases. Conclusion: Although the overall diversity and structure of the gut microbiota did not differ between the MG, NIND and CIDP groups, the significant difference in the abundance of Deltaproteobacteria and Faecalibacterium supports the possible role of gut microbiota as a contributor to pathogenesis of MG. Further studies are needed to confirm these findings and to develop possible treatment strategies.

scholarly journals The nasopharyngeal, ruminal, and vaginal microbiota and the core taxa shared across these microbiomes in virgin yearling heifers exposed to divergent in utero nutrition during their first trimester of gestation and in pregnant beef heifers in response to mineral supplementation

2021 ◽  
Author(s):  
Samat Amat ◽  
Devin B Holman ◽  
Kaycie Schmidt ◽  
Ana Clara B Menezes ◽  
Friederike Baumgaertner ◽  
...  
Keyword(s):  
Mixed Model ◽  
Linear Mixed Model ◽  
First Trimester ◽  
Nervous System Development ◽  
Vaginal Microbiota ◽  
Rrna Gene ◽  
Beef Heifers ◽  
Mineral Supplement ◽  
Alpha And Beta Diversity ◽  
Significant Difference

Emerging evidence has indicated that microbial transmission from the bovine dam to her fetus may take place before birth, and that the maternal microbiota during pregnancy modulates programming of fetal metabolic and nervous system development, highlighting the potential and extended role of the maternal microbiome in calf health and development. In the present study, we characterized the nasopharyngeal, ruminal and vaginal microbiota from two cohorts of beef heifers managed at the same location: 1) virgin yearling heifers (9 months old) born from dams received gestational diets which resulted in low (LG, n = 22) or medium (MG, n = 23) weight gain during the first 84 days of gestation; and 2) pregnant replacement heifers that received a vitamin and mineral supplement (VTM, n = 17) or not (Control, n = 15) during the first 6 months of gestation. Nasopharyngeal and vaginal swabs as well as ruminal fluid were collected from both cohorts and the microbiota of each sample was assessed using 16S rRNA gene sequencing. In addition to the comparison between treatment groups within each cohort, the similarity of the microbiota of the three sample types were evaluated, and shared taxa amongst these communities were identified. The bacterial genera present in the rumen and vagina that can influence methanogenic archaeal genera were predicted using a stepwise-selected generalized linear mixed model. No significant difference was observed in the alpha and beta diversity in any of the nasopharyngeal, ruminal and vaginal microbiota between LG and MG offspring virgin heifers, or between the control and VTM pregnant heifers (p > 0.05). Subtle compositional changes in the vaginal microbiota in yearling heifers, and in the nasopharyngeal and ruminal microbiota of pregnant heifers were detected in response to treatments. Forty-one archaeal and bacterial OTUs were shared by over 60% of all samples from both virgin and pregnant heifers. Two taxa within the Methanobrevibacter genus were identified as core taxa and this genus was more relatively abundant in pregnant heifers compared to virgin heifers. Among the 25 top genera, Prevotella and Prevotella UCG-003 (negative) and Christensenellaceae R-7 group (positive) were predicted to have a significant effect on ruminal Methanobrevibacter spp. The results of this study indicate that there is little impact of divergent gestational nutrition during the first trimester on the calf microbiome at 9 months postnatal, and that VTM supplementation during pregnancy may not alter the maternal microbiome. This study provides evidence that there are several microbial taxa, including methanogenic archaea, that are shared across the respiratory, gastrointestinal, and reproductive tracts, suggesting the need for a holistic evaluation of the bovine microbiota when considering potential maternal sources for seeding calves with pioneer microbiota.

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