scholarly journals Prediction of Grape Sap Flow in a Greenhouse Based on Random Forest and Partial Least Squares Models

Water ◽  
2021 ◽  
Vol 13 (21) ◽  
pp. 3078
Author(s):  
Xuelian Peng ◽  
Xiaotao Hu ◽  
Dianyu Chen ◽  
Zhenjiang Zhou ◽  
Yinyin Guo ◽  
...  

Understanding variations in sap flow rates and the environmental factors that influence sap flow is important for exploring grape water consumption patterns and developing reasonable greenhouse irrigation schedules. Three irrigation levels were established in this study: adequate irrigation (W1), moderate deficit irrigation (W2) and deficit irrigation (W3). Grape sap flow estimation models were constructed using partial least squares (PLS) and random forest (RF) algorithms, and the simulation accuracy and stability of these models were evaluated. The results showed that the daily mean sap flow rates in the W2 and W3 treatments were 14.65 and 46.94% lower, respectively, than those in the W1 treatment, indicating that the average daily sap flow rate increased gradually with an increase in the irrigation amount within a certain range. Based on model error and uncertainty analyses, the RF model had better simulation results in the different grape growth stages than the PLS model did. The coefficient of determination and Willmott’s index of agreement for RF model exceeded 0.78 and 0.90, respectively, and this model had smaller root mean square error and d-factor (evaluation index of model uncertainty) values than the PLS model did, indicating that the RF model had higher prediction accuracy and was more stable. The relative importance of the model predictors was determined. Moreover, the RF model more comprehensively reflected the influence of meteorological factors and the moisture content in different soil layers on the sap flow rate than the PLS model did. In summary, the RF model accurately simulated sap flow rates, which is important for greenhouse grape irrigation.

Plant Methods ◽  
2021 ◽  
Vol 17 (1) ◽  
Author(s):  
Jordi Ortuño ◽  
Sokratis Stergiadis ◽  
Anastasios Koidis ◽  
Jo Smith ◽  
Chris Humphrey ◽  
...  

Abstract Background The presence of condensed tannins (CT) in tree fodders entails a series of productive, health and ecological benefits for ruminant nutrition. Current wet analytical methods employed for full CT characterisation are time and resource-consuming, thus limiting its applicability for silvopastoral systems. The development of quick, safe and robust analytical techniques to monitor CT’s full profile is crucial to suitably understand CT variability and biological activity, which would help to develop efficient evidence-based decision-making to maximise CT-derived benefits. The present study investigates the suitability of Fourier-transformed mid-infrared spectroscopy (MIR: 4000–550 cm−1) combined with multivariate analysis to determine CT concentration and structure (mean degree of polymerization—mDP, procyanidins:prodelphidins ratio—PC:PD and cis:trans ratio) in oak, field maple and goat willow foliage, using HCl:Butanol:Acetone:Iron (HBAI) and thiolysis-HPLC as reference methods. Results The MIR spectra obtained were explored firstly using Principal Component Analysis, whereas multivariate calibration models were developed based on partial least-squares regression. MIR showed an excellent prediction capacity for the determination of PC:PD [coefficient of determination for prediction (R2P) = 0.96; ratio of prediction to deviation (RPD) = 5.26, range error ratio (RER) = 14.1] and cis:trans ratio (R2P = 0.95; RPD = 4.24; RER = 13.3); modest for CT quantification (HBAI: R2P = 0.92; RPD = 3.71; RER = 13.1; Thiolysis: R2P = 0.88; RPD = 2.80; RER = 11.5); and weak for mDP (R2P = 0.66; RPD = 1.86; RER = 7.16). Conclusions MIR combined with chemometrics allowed to characterize the full CT profile of tree foliage rapidly, which would help to assess better plant ecology variability and to improve the nutritional management of ruminant livestock.


2020 ◽  
Vol 12 (22) ◽  
pp. 9451
Author(s):  
Xiaowen Wang ◽  
Huanjie Cai ◽  
Liang Li ◽  
Xiaoyun Wang

Deficit irrigation strategy is essential for sustainable agricultural development in arid regions. A two−year deficit irrigation field experiment was conducted to study the water dynamics of winter wheat under deficit irrigation in Guanzhong Plain in Northwest China. Three irrigation levels were implemented during four growth stages of winter wheat: 100%, 80% and 60% of actual evapotranspiration (ET) measured by the lysimeter with sufficient irrigation treatment (CK). The agro−hydrological model soil−water−atmosphere−plant (SWAP) was used to simulate the components of the farmland water budget. Sensitivity analysis for parameters of SWAP indicated that the saturated water content and water content shape factor n were more sensitive than the other parameters. The verification results showed that the SWAP model accurately simulated soil water content (average relative error (MRE) < 21.66%, root mean square error (RMSE) < 0.07 cm3 cm−3) and ET (R2 = 0.975, p < 0.01). Irrigation had an important impact on actual plant transpiration, but the actual soil evaporation had little change among different treatments. The average deep percolation was 14.54 mm and positively correlated with the total irrigation amount. The model established using path analysis and regression methods for estimating ET performed well (R2 = 0.727, p < 0.01). This study provided effective guidance for SWAP model parameter calibration and a convenient way to accurately estimate ET with fewer variables.


2021 ◽  
Author(s):  
Bayu Sukmanto ◽  
Sadaira Packer ◽  
Muhammad Gulfam ◽  
David Hollinger

Electromyography (EMG) is an electrical voltage potential linked to muscle contraction, resulting in human joint motion, such as knee flexion. Knee injuries, such as knee osteoarthritis (KOA), disrupt functional mobility of the knee joint and subsequently atrophy the muscles controlling knee movement during activities of daily living (ADL). Consequently, weakened muscles exhibiting deteriorated EMG signal fidelity are hypothesized to have discernible signal patterns from a healthy individual's EMG signals. Pattern recognition algorithms are useful for mapping a set of complex inputs (EMG signals and knee angles) to classify knee health status (injured vs. healthy). A secondary outcome is to predict future knee angles from previous input signals to inform a robotic knee exoskeleton to apply real-time torque assistance to a patient during ADL. A Decision Tree Classifier, Random Forest, Naive Bayes, and a Feed-Forward Neural Network (Fully Connected) were used for binary classification (healthy vs. injured). Partial Least Squares Regression, Decision Tree Regressor, and XGBoost were used to predict future joint angles for the regression task (knee angle prediction). Overall, the Random Forest Classifier had the best overall classification performance. XGBoost and Decision Tree Regression performed the best among regression algorithms for predicting real-time angles during walking while Partial Least Squares Regression performed the best during the standing tasks. In summary, our Machine Learning methods are useful for assisting clinicians and patients during physical rehabilitation by providing quantitative insight into the patient's neuromuscular control of the knee.


2018 ◽  
Vol 40 (8) ◽  
pp. 3204-3226 ◽  
Author(s):  
Munkhdulam Otgonbayar ◽  
Clement Atzberger ◽  
Jonathan Chambers ◽  
Amarsaikhan Damdinsuren

2018 ◽  
Vol 34 (3) ◽  
pp. 545-553 ◽  
Author(s):  
Pan Tang ◽  
Hong Li ◽  
Zakaria Issaka ◽  
Chao Chen

Abstract. The proportional injector is commonly used in agricultural chemigation due to its relatively high injection ratio. A major challenge with the proportional injector is related to its dependence on differential pressure, which is significantly influenced by changes in the viscosity, and setting injection ratio. A series of experiments were conducted to investigate the influence of differential pressures, solution viscosities, and setting injection ratios on the inlet and injection flow rates of a D25RE2 proportional injector. A mathematical model was developed to represent the hydraulic performance of this proportional injector. Finally, the mathematical model was verified using four different kinds of chemicals (humic acid, urea ammonium nitrate 32% N, fosthiazate, and colza oil). The inlet flow rate increased significantly with increasing differential pressure and decreased with increasing setting injection ratio. Results showed that the highest operating differential pressure should not be greater than 0.15 MPa for the D25RE2 proportional injector. The inlet flow rate gradually decreased with increasing viscosity, and a quadratic function relationship was derived between the inlet flow rate and the viscosity. The injection flow rate decreased with increasing viscosity. However, the viscosity had a slight influence on the injection flow rate when it was lower than 20 mPa·s. Mathematical models for calculating the inlet and injection flow rates with the influence of viscosity were developed, respectively. The coefficient of determination and the root mean square error (RMSE) for inlet flow rate calculation model were 0.8316 and 143.36 kg h-1, respectively. The coefficient of determination and the RMSE for the injection flow rate calculation model were 0.9706 and 0.9520 kg h-1, respectively. The calculating formula of inlet flow rate had a satisfactory accuracy under low differential pressure and high setting injection ratio. The calculating formula of the injection flow rate had a good accuracy, which is useful for calculating the injection flow rate when injected with different kinds of solutions. The average deviations between calculated and experimental injection flow rates with injection ratios of 0.2%, 1.2%, and 2% were obtained as 4.96%, 4.66%, and 4.1% respectively, which indicated that the average deviations decreased with increasing setting injection ratio. Results from this study are useful for both designers and users to effectively manage agricultural chemigation system with the proportional injector. Keywords: Agriculture, Chemigation, Proportional injector, Hydraulic performance.


2021 ◽  
Vol 13 (14) ◽  
pp. 2657
Author(s):  
Yulong Tu ◽  
Bin Zou ◽  
Huihui Feng ◽  
Mo Zhou ◽  
Zhihui Yang ◽  
...  

Visible and near-infrared (VNIR) spectroscopy technology for soil heavy metal (HM) concentration prediction has been widely studied. However, its spectral response characteristics are still uncertain. In this study, a near standard soil Cd samples (NSSCd) spectra enhanced modeling strategy was developed in order to to reveal the soil cadmium (Cd) spectral response characteristics and predict its concentration. NSSCd were produced by adding the quantitative Cd solution into background soil. Then, prior spectral bands (i.e., the bands with higher variable importance in projection (VIP) score in NSSCd spectra) were used for predicting Cd concentration in soil samples collected from the Hengyang mining area and Baoding agriculture area. The partial least squares (PLS) and competitive adaptive reweighted sampling-partial least squares (CARS-PLS) were used for validation. Compared to using entire VNIR spectral ranges, the new modeling strategy performed very well, with the coefficient of determination (R2) and the ratio of prediction to deviation (RPD) showing an improvement from 0.63 and 1.72 to 0.71 and 1.95 in Hengyang and from 0.54 and 1.57 to 0.76 and 2.19 in Baoding. These results suggest that NSS prior spectral bands are critical for soil HM prediction. Our results represent an exciting finding for the future design of remote sensing sensors for soil HM detection.


2021 ◽  
pp. 096703352110065
Author(s):  
Judith S Nantongo ◽  
BM Potts ◽  
T Rodemann ◽  
H Fitzgerald ◽  
NW Davies ◽  
...  

Incorporating chemical traits in breeding requires the estimation of quantitative genetic parameters, especially the levels of additive genetic variation. This requires large numbers of samples from pedigreed populations. Conventional wet chemistry procedures for chemotyping are slow, expensive and not a practical option. This study focuses on the chemical variation in Pinus radiata, where the near infrared (NIR) spectral properties of the needles, bark and roots before and after exposure to methyl jasmonate (MJ) and artificial bark stripping (strip) treatments were investigated as an alternative approach. The aim was to test the capability of NIR spectroscopy to (i) discriminate samples exposed to MJ and strip assessed 7, 14, 21 and 28 days after treatment from untreated samples, and (ii) quantitatively predict individual chemical compounds in the three plant parts. Using principal components analysis (PCA) on the spectral data, we differentiated between treated and untreated samples for the individual plant parts. Based on partial least squares–discriminant analysis (PLS-DA) models, the best discrimination of treated from non-treated samples with the smallest root mean square error cross-validation (RMSECV) and highest coefficient of determination (r2) was achieved in the fresh needles (r2 = 0.81, RMSECV= 0.24) and fresh inner bark (r2 = 0.79, RMSECV = 0.25) for MJ-treated samples 14 days and 21 days after treatment, respectively. Using partial least squares regression, models for individual compounds gave high (r2), residual predictive deviation (RPD), lab to NIR error (PRL) or range error ratio (RER) for fructose (r2 = 0.84, RPD = 1.5, PRL = 0.71, RER = 7.25) and glucose (r2 = 0.83, RPD = 1.9, PRL = 1.14, RER = 8.50) and several diterpenoids. This provides an optimistic outlook for the use of NIR spectroscopy-based models for the larger-scale prediction of the P. radiata chemistry needed for quantitative genetic studies.


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