Biogeochemical niche of phosphorus sequestrating magnetotactic bacteria in Lake Pavin, a freshwater feruginous environment.

Author(s):  
Cécile Bidaud ◽  
Caroline L. Monteil ◽  
Nicolas Menguy ◽  
Vincent Busigny ◽  
Didier Jézéquel ◽  
...  

<p>Phosphorus (P) is essential to life but a limiting nutrient in many ecosystems. Understanding the role of microorganisms in P cycling, especially the processes of P uptake and storage, is a major environmental issue.  Only few models are known to highly sequestrate phosphorus and mostly in marine environments. We thus need to improve our knowledge about other model of sequestration and especially in freshwater environments.</p><p>Freshwater magnetotactic bacteria (MTB) affiliated to the Magnetococcaceae family have been identified within the water column of Lake Pavin in France [3]. Similarly, to the marine Thiomarguarita and Beggiatoa [1, 2], they accumulate intracellular polyphosphates (PolyP) to a uniquely high extent, up to 90% of their cell volume. In contradiction with the marine Thiomarguarita and Beggiatoa, the Magnetococcaceae accumulate PolyP in anoxic conditions. They represent the major population of MTB and are located right under the oxic-anoxic interface in a zone of strong chemical and redox gradients. These gradients allow the study of the impact of varying chemical conditions on microbial physiology.</p><p>We aim at characterizing Magnetococcaceae distribution as a function of depth and therefore of different chemical parameters, but also at determining the drivers of PolyP accumulation. </p><p>Here, we combine a variety of methods to analyse these MTB and their potential appartenance to a specific ecological niche in the water column. We measured the physico-chemical parameters of the water column (O<sub>2</sub>, pH, redox, conductivity, FDOM, turbidity, etc.). We used a new sampling system that allowed us to reach a better spatial resolution [4], from 1 m to 20 cm. We were therefore able to better estimate the impact of the chemical parameters on the MTB. We then sampled the water to measure the geochemical parameters using ICP-OES and to characterize MTB via optical and electronic microscopy. Optical microscopy helped identify the main populations of MTB and their concentrations, while electronic microscopy permitted the characterization of the different magnetosome organisation and PolyP accumulation capacities. Multivariate statistics were finally performed on all data.</p><p>Multivariate statistics identified several parameters positively and significantly correlated to the Magnetococcaceae. These parameters are different from the ones correlated to other MTB of the water column. We therefore show that the Magnetococcaceae live into a specific niche with specific biogeochemical parameters. These correlated parameters include dissolved lithium concentration, mass percentage of nitrogen, magnesium and particulate P. Phosporus  and magnesium are linked to the formation of PolyP, lithium represent a cofactor for phosphate transport [5] and nitrogen might be linked to nitrate transportation by the MTB [6].</p><p>Genomic analyses will be done in the future to allow further comprehension on molecular mecanisms and PolyP formation.</p><p> </p><p>[1] Brock J, Schulz-Vogt HN. (2011) ISME Journal <strong>5</strong>, 497-506. [2] Mubmann M et al. (2007) PLoS Biology <strong>5</strong>(9), e230. [3] Rivas-Lamelo S et al. (2017) Geochem. Persp. Let. <strong>5</strong>, 35–41. [4] Busigny et al., submitted to Environmental Microbiology. [5] Jakobsson E et al. (2017) J. Membr. Biol. <strong>250</strong>,587-604. [6] Li et al. (2020) Geophys. Res. Biogeosciences.</p>

2004 ◽  
Vol 68 (4) ◽  
pp. 633-648 ◽  
Author(s):  
D. Prelević ◽  
S. F. Foley ◽  
V. Cvetković ◽  
R. L. Romer

AbstractTertiary ultrapotassic volcanic rocks from Serbia occasionally display low levels of K2O and K2O/ Na2O. In these rocks, analcime regularly appears as pseudomorphs after pre-existing leucite microphenocrysts. The process ofleucite transformation in Serbian ultrapotassic rocks is very thorough: fresh leucite survives only in ugandites from the Koritnik lava flows as well as in rare inclusions in Cpx. This paper focuses on the impact of ‘analcimization’ on the mineralogy and geochemistry ofthe Serbian ultrapotassic rocks, using the samples where leucite survived as a monitor for the process.Analcimization has had a great impact on the geochemistry of the rocks, but affects only a restricted number of chemical parameters. These are the falsification of the original K2O/Na2O ratio, the decoupling oflarge-ion lithophile elements resulting in considerable depletion of Rb and K2O, but not ofBa, and sporadic, but extreme enrichment ofCs in some analcime-bearing samples (up to 900 ppm). Analcimization is also recognized by an increase in whole-rock δ18O values of ∼3% compared to fresh rocks, which correlates with the level of whole-rock hydration. Finally, the 87Sr/86Sr enrichment at nearly constant 143Nd/144Nd demonstrated by some rocks can also be explained by the analcimization ofleucite. For samples with variable 87Sr/86Sr from the same lava flow, 87Sr/86Sr values correlate with modal analcime abundance (ex-leucite), loss on ignition of whole-rock and whole-rock δ18O values. The extreme depletion in K and enrichment in Na, together with modification of other geochemical parameters, may have led to the misinterpretation of the origin and geodynamic affiliations of the Serbian ultrapotassic rocks, had the effects of analcimization not been taken into account.


2020 ◽  
Author(s):  
◽  
Julija Pauraitė-Dudek

The impact of submicron aerosol source and physical-chemical parameters on atmospheric radiative balance


Author(s):  
Vincent Busigny ◽  
François P. Mathon ◽  
Didier Jézéquel ◽  
Cécile C. Bidaud ◽  
Eric Viollier ◽  
...  

2021 ◽  
Vol 11 (11) ◽  
pp. 4934
Author(s):  
Viola Rossano ◽  
Giuliano De Stefano

Computational fluid dynamics was employed to predict the early stages of the aerodynamic breakup of a cylindrical water column, due to the impact of a traveling plane shock wave. The unsteady Reynolds-averaged Navier–Stokes approach was used to simulate the mean turbulent flow in a virtual shock tube device. The compressible flow governing equations were solved by means of a finite volume-based numerical method, where the volume of fluid technique was employed to track the air–water interface on the fixed numerical mesh. The present computational modeling approach for industrial gas dynamics applications was verified by making a comparison with reference experimental and numerical results for the same flow configuration. The engineering analysis of the shock–column interaction was performed in the shear-stripping regime, where an acceptably accurate prediction of the interface deformation was achieved. Both column flattening and sheet shearing at the column equator were correctly reproduced, along with the water body drift.


2019 ◽  
Vol 11 (18) ◽  
pp. 5022 ◽  
Author(s):  
Junju Zhou ◽  
Juan Xiang ◽  
Lanying Wang ◽  
Guoshuang Zhong ◽  
Guofeng Zhu ◽  
...  

Groundwater chemistry has an important impact on the vegetation distribution in inland areas. An in-depth understanding of the impact of groundwater chemistry on vegetation can help in developing an effective management strategy to protect the inland ecosystem. The aim of this study was to identify the influence of groundwater chemicals on species diversity and the distribution characteristics of wetland plants at multiple scales based on the groundwater chemical data from 15 sampling points and the distribution data of 13 plants in the Sugan Lake Wetland in 2016. The results show that the groundwater of the Sugan Lake Wetland is weakly alkaline, with high salinity and hardness; the water chemical type is Na-SO4-Cl; the concentration of the major water chemical parameters is significantly different and is the highest in the northwest, followed by the southwest, and is the lowest in the east; with an increase in the groundwater depth, the concentration of major water chemical parameters first showed an increasing trend followed by a decreasing trend; Artemisia frigida Willd, Poa annua L. and Triglochin maritimum L. were adapted to the environment with a higher ion concentration of the groundwater, and their salt resistance was the strongest; Blysmus sinocompressus and Polygonum are more adapted to the environment with lower salinity and hardness of groundwater; Thermopsis lanceolata has stronger adaptability to the ion concentration, salinity, and hardness of groundwater; other plants are adapted to environments where the ion concentration, salinity, and hardness of the groundwater are moderate.


2010 ◽  
Vol 192 (7) ◽  
pp. 559-567 ◽  
Author(s):  
Guillaume Borrel ◽  
Anne-Catherine Lehours ◽  
Corinne Bardot ◽  
Xavier Bailly ◽  
Gérard Fonty

2021 ◽  
Vol 62 (4) ◽  
pp. 415-426
Author(s):  
E.I. Lastochkin ◽  
G.S. Ripp ◽  
D.S. Tsydenova ◽  
V.F. Posokhov ◽  
A.E. Murzintseva

Abstract —We consider the isotope-geochemical features of epithermal fluorite deposits in Transbaikalia, including the REE compositions, Sr isotope ratios, Sm–Nd systems, and isotope compositions of oxygen, carbon, hydrogen, and sulfur. The 87Sr/86Sr ratios in fluorites are within 0.706–0.708, and the εNd values are negative. Oxygen in quartz, the main mineral of the deposits, has a light isotope composition (δ18O = –3.4 to +2.6‰), and the calculated isotope composition of oxygen in the fluid in equilibrium with quartz (δ18O = –9 to –16‰) indicates the presence of meteoric water. The latter is confirmed by analysis of the isotope compositions of oxygen and hydrogen in gas–liquid inclusions in fluorites from three deposits. These isotope compositions are due to recycling caused by the impact of shallow basic plutons. The isotope composition of sulfur indicates its deep source. During ascent, sulfur became enriched in its light isotope (δ34S = –1.8 to –7.7‰). We assess the association of fluorite ores with basaltoids widespread in the study area. The isotope and geochemical parameters suggest their spatial proximity. Probably, the basaltoids were responsible for the recycling of meteoric water. It is shown that the epithermal fluorite deposits formed by the same mechanism as fissure–vein thermal waters in western Transbaikalia.


2021 ◽  
Author(s):  
Alexandra Gogou ◽  
Constantine Parinos ◽  
Spyros Stavrakakis ◽  
Emmanouil Proestakis ◽  
Maria Kanakidou ◽  
...  

<p>Biotic and abiotic processes that form, alter, transport, and remineralize particulate organic carbon, silicon, calcium carbonate, and other minor and trace chemical species in the water column are central to the ocean’s ecological and biogeochemical functioning and of fundamental importance to the ocean carbon cycle. Sinking particulate matter is the major vehicle for exporting carbon from the sea surface to the deep sea. During its transit towards the sea floor, most particulate organic carbon (POC) is returned to inorganic form and redistributed in the water column. This redistribution determines the surface concentration of dissolved CO<sub>2</sub>, and hence the rate at which the ocean can absorb CO<sub>2</sub> from the atmosphere. The ability to predict quantitatively the depth profile of remineralization is therefore critical to deciphering the response of the global carbon cycle to natural and human-induced changes.</p><p>Aiming to investigate the significant biogeochemical and ecological features and provide new insights on the sources and cycles of sinking particulate matter, a mooring line of five sediment traps was deployed from 2006 to 2015 (with some gap periods) at 5 successive water column depths (700, 1200, 2000, 3200 and 4300 m) in the SE Ionian Sea, northeastern Mediterranean (‘NESTOR’ site). We have examined the long-term records of downward fluxes for Corg, N<sub>tot</sub>, δ<sup>13</sup>Corg and δ<sup>15</sup>N<sub>tot</sub>, along with the associated ballast minerals (opal, lithogenics and CaCO<sub>3</sub>), lipid biomarkers, Chl-a and PP rates, phytoplankton composition, nutrient dynamics and atmospheric deposition.  </p><p>The satellite-derived seasonal and interannual variability of phytoplankton metrics (biomass and phenology) and atmospheric deposition (meteorology and air masses origin) was examined for the period of the sediment trap experiment. Regarding the atmospheric deposition, synergistic opportunities using Earth Observation satellite lidar and radiometer systems are proposed (e.g. Cloud‐Aerosol Lidar with Orthogonal Polarization - CALIOP, Moderate Resolution Imaging Spectroradiometer - MODIS), aiming towards a four‐dimensional exploitation of atmospheric aerosol loading (e.g. Dust Optical Depth) in the study area.</p><p>Our main goals are to: i) develop a comprehensive knowledge of carbon fluxes and associated mineral ballast fluxes from the epipelagic to the mesopelagic and bathypelagic layers, ii) elucidate the mechanisms governing marine productivity and carbon export and sequestration to depth and iii) shed light on the impact of atmospheric forcing and deposition in respect to regional and large scale circulation patterns and climate variability and the prevailing oceanographic processes (internal variability).</p><p>Acknowledgments</p><p>We acknowledge support of this work by the Action ‘National Network on Climate Change and its Impacts – <strong>CLIMPACT</strong>’, funded by the Public Investment Program of Greece (GSRT, Ministry of Development and Investments).</p>


2018 ◽  
Vol 18 (05) ◽  
pp. 440-444
Author(s):  
Noel Pérez ◽  
Jorge Luis Velazco-Vargas ◽  
Osmel Martin ◽  
Rolando Cardenas ◽  
Jesús Martínez-Frías

AbstractThe potential of a mass asteroid impact on Earth to disturb the chemosynthetic communities at global scale is discussed. Special emphasis is made on the potential influence on anammox communities and their implications in the nitrogen biogeochemical cycle. According to our preliminary estimates, anammox communities could be seriously affected as a consequence of global cooling and the large process of acidification usually associated with the occurrence of this kind of event. The scale of affectations could vary in a scenario like the Chicxulub as a function of the amount of soot, depth of the water column and the deposition rate for sulphates assumed in each case. The most severe affectations take place where the amount of soot and sulphates produced during the event is higher and the scale of time of settlements for sulphates is short, of the order of 10 h. In this extreme case, the activity of anammox is considerably reduced, a condition that may persist for several years after the impact. Furthermore, the impact of high levels of other chemical compounds like sulphates and nitrates associated with the occurrence of this kind of event are also discussed.


Author(s):  
Frances M. Judge ◽  
Eoin Lyden ◽  
Michael O'Shea ◽  
Brian Flannery ◽  
Jimmy Murphy

Abstract This research presents a methodology for carrying out uncertainty analysis on measurements made during wave basin testing of an oscillating water column wave energy converter. Values are determined for Type A and Type B uncertainty for each parameter of interest, and uncertainty is propagated using the Monte Carlo method to obtain an overall Expanded Uncertainty with a 95% confidence level associated with the Capture Width Ratio of the device. An analysis into the impact of reflections on the experimental results reveals the importance of identifying the incident and combined wave field at each measurement location used to determine device performance, in order to avoid misleading results.


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