scholarly journals Variability in deer diet and plant vulnerability to browsing among forests with different establishment years of sika deer

PeerJ ◽  
2021 ◽  
Vol 9 ◽  
pp. e12165
Author(s):  
Yuzu Sakata ◽  
Nami Shirahama ◽  
Ayaka Uechi ◽  
Kunihiro Okano
Keyword(s):  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Sika Deer ◽  
Food Selection ◽  
Community Analysis ◽  
Deer Browsing ◽  
Large Variability ◽  
Plant Coverage ◽  
The Difference

Increased ungulate browsing alters the composition of plant communities and modifies forest ecosystems worldwide. Ungulates alter their diet following changes in availability of plant species; however, we know little about how browse selection and plant community composition change with different stages of deer establishment. Here, we provide insight into this area of study by combining multiple approaches: comparison of the understory plant community, analysis of records of browsing damage, and DNA barcoding of sika deer feces at 22 sites in forests in northern Japan varying in when deer were first established. The coverage of vegetation and number of plant species were only lower at sites where deer were present for more than 20 years, while the difference in plant coverage among deer establishment years varied among plant species. Deer diet differed across establishment years, but was more affected by the site, thereby indicating that food selection by deer could change over several years after deer establishment. Plant life form and plant architecture explained the difference in plant coverage across establishment years, but large variability was observed in deer diet within the two categories. Integrating these results, we categorized 98 plant taxa into six groups that differed in vulnerability to deer browsing (degree of damage and coverage). The different responses to browsing among plant species inferred from this study could be a first step in predicting the short- and long-term responses of forest plant communities to deer browsing.

scholarly journals Pattern of Plant Community Distribution along the Elevational Gradient and Anthropogenic Disturbance in Gole Forest, Ethiopia

2020 ◽  
Vol 2020 ◽  
pp. 1-9
Author(s):  
Mesfin Belete Hailemariam ◽  
Tamru Demsis Temam
Keyword(s):  
Species Composition ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Environmental Variables ◽  
Similarity Index ◽  
Hierarchical Cluster ◽  
Elevational Gradient ◽  
Agglomerative Hierarchical Cluster Analysis ◽  
The Difference

Vegetation-environment relationships are usually studied along elevational gradient. The patterns of plant community distribution in Gole forest, Ethiopia, were studied along elevational gradient and disturbances. Disturbances were recorded following the elevational gradient. For vegetation data collection, 62 sample plots of size 20 × 20 m were established along an elevational gradient (2728–3480 m.a.s.l). Data on species composition and environmental variables were measured and recorded in each plot. The elevation of each sample plot was measured using Garmin GPS. Anthropogenic disturbances in each plot were estimated using the following scales: 0 = no disturbance, 1 = slightly disturbed, 2 = moderately disturbed, and 3 = highly disturbed. R statistical package was used for cluster and ordination analysis. Boxplots and analysis of variance were used to assess the relationships between plant communities and environmental variables. Sorensen’s similarity coefficient was used to detect similarities and dissimilarities among communities. A total of 114 plant species belonging to 57 families and 94 genera were identified. Five plant community types were identified using agglomerative hierarchical cluster analysis. Every plant community had differences in composition and environmental variables. The variation in plant community distributions was significantly related to elevation and disturbance. Plant community distribution was negatively correlated with elevation ( P < 0.05 ) and also with disturbance ( P < 0.05 ). Sorensen’s similarity index showed that there was a difference in the distribution of plant species composition among the communities. The difference in plant community distribution of Gole forest was significantly related to elevation. Disturbances also have a considerable influence on the plant communities and mitigation of disturbance should be the main measure that needs to be taken into account in conservation planning in the study area.

scholarly journals Phytosociological surveys: tools for weed science?

2013 ◽  
Vol 31 (2) ◽  
pp. 469-482 ◽  
Author(s):  
G. Concenço ◽  
M. Tomazi ◽  
I.V.T. Correia ◽  
S.A. Santos ◽  
L. Galon
Keyword(s):  
Cluster Analysis ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Distinct Group ◽  
Weed Science ◽  
Comprehensive Overview ◽  
Ecological Evaluation ◽  
Natural Plant ◽  
Ecological Basis

In simple terms, a phytosociological survey is a group of ecological evaluation methods whose aim is to provide a comprehensive overview of both the composition and distribution of plant species in a given plant community. To understand the applicability of phytosociological surveys for weed science, as well as their validity, their ecological basis should be understood and the most suitable ones need to be chosen, because cultivated fields present a relatively distinct group of selecting factors when compared to natural plant communities. For weed science, the following sequence of steps is proposed as the most suitable: (1) overall infestation; (2) phytosociological tables/graphs; (3) intra-characterization by diversity; (4) inter-characterization and grouping by cluster analysis. A summary of methods is established in order to assist Weed Science researchers through their steps into the realm of phytosociology.

scholarly journals Evidence of within-species specialization by soil microbes and the implications for plant community diversity

2019 ◽  
Vol 116 (15) ◽  
pp. 7371-7376 ◽  
Author(s):  
Jenalle L. Eck ◽  
Simon M. Stump ◽  
Camille S. Delavaux ◽  
Scott A. Mangan ◽  
Liza S. Comita
Keyword(s):  
Microbial Community ◽  
Seed Dispersal ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Soil Microbial Community ◽  
Soil Microbes ◽  
Wild Plant ◽  
Soil Microbial ◽  
Species Specific

Microbes are thought to maintain diversity in plant communities by specializing on particular species, but it is not known whether microbes that specialize within species (i.e., on genotypes) affect diversity or dynamics in plant communities. Here we show that soil microbes can specialize at the within-population level in a wild plant species, and that such specialization could promote species diversity and seed dispersal in plant communities. In a shadehouse experiment in Panama, we found that seedlings of the native tree species, Virola surinamensis (Myristicaceae), had reduced performance in the soil microbial community of their maternal tree compared with in the soil microbial community of a nonmaternal tree from the same population. Performance differences were unrelated to soil nutrients or to colonization by mycorrhizal fungi, suggesting that highly specialized pathogens were the mechanism reducing seedling performance in maternal soils. We then constructed a simulation model to explore the ecological and evolutionary consequences of genotype-specific pathogens in multispecies plant communities. Model results indicated that genotype-specific pathogens promote plant species coexistence—albeit less strongly than species-specific pathogens—and are most effective at maintaining species richness when genetic diversity is relatively low. Simulations also revealed that genotype-specific pathogens select for increased seed dispersal relative to species-specific pathogens, potentially helping to create seed dispersal landscapes that allow pathogens to more effectively promote diversity. Combined, our results reveal that soil microbes can specialize within wild plant populations, affecting seedling performance near conspecific adults and influencing plant community dynamics on ecological and evolutionary time scales.

scholarly journals Plant Community Analysis along Environmental Gradients in Moist Afromontane Forest of Gerba Dima, South-western Ethiopia

2020 ◽  
Author(s):  
Abyot Dibaba Hundie ◽  
Teshome Soromessa Urgessa ◽  
Bikila Warkineh Dullo
Keyword(s):  
Cluster Analysis ◽  
Species Diversity ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Environmental Gradients ◽  
Floristic Composition ◽  
Regional Government ◽  
Community Types ◽  
Western Ethiopia

Abstract Background This study was carried out in Gerba Dima Forest, South-Western Ethiopia, to determine the floristic composition, species diversity and community types along environmental gradients. Ninety sample plots having a size of 25 × 25 m (625 m2) were laid by employing stratified random sampling. Nested plots were used to sample plants of different sizes and different environmental variables. All woody plant species with Diameter at breast height (DBH) ≥ 2.5 cm and height ≥ 1.5 m were recorded in 25 m X 25 m plots. Within the major plots, five 3 m x 3 m subplots (9 m2) was used to collect shrubs with dbh < 2.5 cm and > 1.5 m height. Within each 9 m2subplots, two 1 m2 subplots were used to collect data on the species and abundance of herbaceous plants. Hierarchical (agglomerative) cluster analysis was performed using the free statistical software R version 3.6.1 using package cluster to classify the vegetation into plant community types. Redundancy Analysis (RDA) ordination was used in describing the pattern of plant communities along an environmental gradient. Result One hundred and eighty plant species belonging to 145 genera, 69 families and comprising of 15 endemic species were recorded. Cluster analysis resulted in five different plant communities and this result was supported by the ordination result. RDA result showed altitude was the main environmental variable in determining the plant communities. The ANOVA test indicated that the five community types differ significantly from each other with regard to EC and K. Conclusions The studied forest can play a significant role in biodiversity conservation since it harbours high species diversity and richness. Thus, all Stakeholders including Oromia Forest and wildlife enterprise (OFWE) and the regional government should work to designate the forest as a biosphere reserve and being registered under UNESCO.

scholarly journals The invasive herb Lupinus polyphyllus can reduce plant species richness independently of local invasion age

2021 ◽  
Author(s):  
Marju Prass ◽  
Satu Ramula ◽  
Miia Jauni ◽  
Heikki Setälä ◽  
D. Johan Kotze
Keyword(s):  
Species Richness ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Vascular Plant ◽  
Plant Species Richness ◽  
Ecological Impacts ◽  
Plant Community Composition ◽  
Lupinus Polyphyllus ◽  
Local Invasion

AbstractThe ecological impacts of invasive species may change or accumulate with time since local invasion, potentially inducing further changes in communities and the abiotic environment. Yet, time since invasion is rarely considered when investigating the ecological impacts of invasive non-native species. To examine the effect of time since invasion on the ecological impacts of Lupinus polyphyllus, a perennial nitrogen-fixing herb, we surveyed vascular plant communities in the presence and absence of L. polyphyllus in young, intermediate, and old semi-natural grassland sites (ca. 5, 10, 15 years representing both time since lupine invasion and plant community age). We analyzed vascular plant community composition, vascular plant species richness, and the cover of various ecological plant groups and L. polyphyllus. In contrast to our hypotheses, we found no change in the mean cover of L. polyphyllus (about 35%) with time since local invasion, and an ordination did not suggest marked changes in plant community composition. L. polyphyllus was associated with lower species richness in invaded plant communities but this effect did not change with time since invasion. Invaded plant communities were also associated with lower occurrence of generalist, oligotrophic (low-nutrient-adapted) and copiotrophic (nutrient-demanding) species but no temporal dynamics were detected. We conclude that even the intermediate cover of L. polyphyllus can reduce plant species richness, but the ecological impact caused by this invader might not dramatically change or accumulate with time since invasion.

Vascular plant communities of a polar oasis at Alexandra Fiord (79° N), Ellesmere Island, Canada

1989 ◽  
Vol 67 (4) ◽  
pp. 1126-1136 ◽  
Author(s):  
M. Muc ◽  
B. Freedman ◽  
J. Svoboda
Keyword(s):  
Cluster Analysis ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Vascular Plants ◽  
Vascular Plant ◽  
Detrended Correspondence Analysis ◽  
High Arctic ◽  
Ellesmere Island ◽  
Community Types

A cluster analysis was used to apportion 136 stands in a High Arctic lowland among six vascular plant community types. These communities are described on the basis of the average prominence values of vascular species and the total cover of macroalgae, bryophytes, lichens, and vascular plants within the designated clusters of stands. The relationships among the community types was explored by a detrended correspondence analysis. The ordination of stands showed considerable floristic overlap among the most widespread plant communities on the lowland. This largely reflects the microtopographic heterogeneity of the sites, the relatively depauperate flora of the High Arctic, and the considerable ecological amplitude of the most prominent vascular plant species.

scholarly journals Effects of plant community history, soil legacy and plant diversity on soil microbial communities

2020 ◽  
Author(s):  
Marc W. Schmid ◽  
Sofia J. van Moorsel ◽  
Terhi Hahl ◽  
Enrica De Luca ◽  
Gerlinde B. Deyn ◽  
...  
Keyword(s):  
Field Experiment ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Plant Diversity ◽  
Soil Microbial Diversity ◽  
Soil Microbial ◽  
Community History ◽  
Soil Legacy ◽  
Bacterial Richness

AbstractPlant and soil microbial diversity are linked through a range of interactions, including the exchange of carbon and nutrients but also herbivory and pathogenic effects. Over time, associations between plant communities and their soil microbiota may strengthen and become more specific, resulting in stronger associations between plant and soil microbial diversity. We tested this hypothesis in a 4-year long field experiment in which we factorially combined plant community history and soil legacy with plant diversity (1, 2, 4, 8, 60 species). Plant community history and soil legacy refer to the presence (“old”) or absence (“new”) of a common history of plants and soils in 52 different plant species compositions during 8 years in a long-term biodiversity experiment in Jena, Germany. After 4 years of growth, we took soil samples in the new field experiment and determined soil bacterial and fungal composition in terms of operational taxonomic units (OTUs) using 16S rRNA gene and ITS DNA sequencing. Plant community history did not affect overall soil community composition but differentially affected bacterial richness and abundances of specific bacteria taxa in association with particular plant species compositions. Soil legacy markedly increased soil bacterial richness and evenness and decreased fungal evenness. Soil fungal richness increased with plant species richness, regardless of plant community history or soil legacy, with the strongest difference between plant monocultures and mixtures. Particular plant species compositions and functional groups were associated with particular bacterial and fungal community compositions. Grasses increased and legumes decreased fungal richness and evenness. Our findings indicate that as experimental ecosystems varying in plant diversity develop over 8 years, plant species associate with specific soil microbial taxa. This can have long-lasting effects on belowground community composition in re-assembled plant communities, as reflected in strong soil legacy signals still visible after 4 years of growing new plant communities. Effects of plant community history on soil communities are subtle and may take longer to fully develop.

Snowmobile Impact on Three Alpine Tundra Plant Communities

1974 ◽  
Vol 1 (2) ◽  
pp. 101-110 ◽  
Author(s):  
Andrew M. Greller ◽  
Madeline Goldstein ◽  
Leslie Marcus
Keyword(s):  
Plant Community ◽  
Plant Communities ◽  
Alpine Tundra ◽  
Living Plant ◽  
Important Species ◽  
Cushion Plant ◽  
Cushion Plants ◽  
Plant Coverage ◽  
Winter Snow ◽  
Silene Acaulis

This paper describes the effects of 1,020 passages of snowmobiles, made over two winters, on three regularly winter-snow-free alpine tundra plant communities. A cushion-plant community on a 7-degrees slope showed a 31% reduction in total living plant coverage due to snowmobile impact. Destruction was greatest to soil lichens, rock lichens, and the cushion-plants Arenaria obtusiloba, Arenaria fendleri, Paronychia sessiliflora var. pulvinata, Silene acaulis, Eritrichium aretioides, and Phlox pulvinata. Graminoids generally survived to increase in importance. On a flat site, a cushion-plant community with Kobresia myosuroides as its most important species, showed the greatest loss of living-plant coverage, namely 46%. This was due primarily to the destruction of Kobresia, although Selaginella densa, Arenaria obtusiloba, Hymenoxys acaulis, and Eritrichium aretioides, also showed heavy losses. In a Kobresia turf community, destruction was decidedly less severe than in the cushion-plant communities, reduction in total living plant coverage being only 19%. It is suggested that the closed nature of the Kobresia turf, with its stiff tussocks, enables it to absorb impact well. It is recommended that snow-mobile travel be confined to Kobresia or similar turfs, when such travel is necessary under snow-free conditions.

Plant community associations with environmental variables in a semi-deciduous tropical forest of the Dominican Republic

2020 ◽  
Author(s):  
José Ramón Martínez Batlle ◽  
Yntze van der Hoek
Keyword(s):  
Dominican Republic ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Environmental Variables ◽  
Deciduous Forest ◽  
Forest Loss ◽  
Habitat Types ◽  
Site Specific ◽  
The Caribbean

AbstractDespite being increasingly threatened by human-induced disturbances, dry forests remain the least studied and protected forest types in the Caribbean region. In contrast to many other forest systems in the world, we have little knowledge of the site-specific variation in vegetation communities within these forests, nor understand how plant species distribution is determined by environmental variables, including among them geological attributes. Here, we assessed the associations between plant communities and habitat types in a semi-deciduous forest of the Dominican Republic. We collected vegetation data from 23 sites within the Ocoa river basin, which we classified into six groups with a Random Forest algorithm, lithology, geomorphology, topography, and last decade history of forest loss as predictor variables. We established three main clusters: one group which encompassed sites with forest over a limestone substrate, four groups of sites with forests over a marlstone substrate with varied degrees of steepness and forest loss history, and one group that gathered all sites with forest over an alluvial substrate. In order to measure the associations of plant communities with groups of sites, we used the indicator value index (IndVal), which indicates whether a plant species is found in one or multiple habitat types, and the phi coefficient of association, which measures species preferences for habitats. We found that 16 species of woody plants are significantly associated with groups of sites by means of their indices. Our findings suggest that the detection of plant species associations with our selection of environmental variables is possible using a combination of indices. We show that there is considerable variation in plant community composition within the semi-deciduous forest studied, and suggest that conservation planning should focus on protection of this variation, while considering the significance and variability of geodiversity as well. In addition, we propose that our indicator groups facilitate vegetation mapping in nearby dry forests, where it is difficult to conduct thorough vegetation or environmental surveys. In short, our analyses hold potential for the development of site-specific management and protection measures for threatened semi-deciduous forests in the Caribbean.

scholarly journals Plant Community Analysis along Environmental Gradients in Moist Afromontane Forest of Gerba Dima, South-western Ethiopia

2021 ◽  
Author(s):  
Abyot Dibaba Hundie ◽  
Teshome Soromessa Urgessa ◽  
Bikila Warkineh Dullo
Keyword(s):  
Cluster Analysis ◽  
Species Diversity ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Environmental Gradients ◽  
Floristic Composition ◽  
Endemic Plant ◽  
Community Types ◽  
Western Ethiopia

Abstract Background: This study was carried out in Gerba Dima Forest, South-Western Ethiopia, to determine the floristic composition, species diversity and community types along environmental gradients. Ninety sample plots having a size of 25 X 25m (625m2) were laid by employing stratified random sampling. Nested plots were used to sample plants of different sizes and different environmental variables. All woody plant species with Diameter at breast height (DBH) ≥ 2.5 cm and height ≥ 1.5m were recorded in 25 m X 25 m plots. Hierarchical (agglomerative) cluster analysis was performed using the free statistical software R version 3.6.1 using package cluster to classify the vegetation into plant community types. Redundancy Analysis (RDA) ordination was used in describing the pattern of plant communities along an environmental gradient. Result: One hundred and eighty plant species belonging to 145 genera, 69 families and comprising of 15 endemic species were recorded. Of these, 52 species (28.9%) were trees, 6 species (3.33%) were Trees/shrubs, 31 species (17.22%) were shrubs, 76 species (42.22%) were herbs, and 15 species (8.33%) were Lianas. Rubiaceae, Acanthaceae and Asteraceae were the richest family each represented by 11 genera and 11 species (6.11%), 9 genera and 11 species (6.11%), 6 genera and 11 species (6.11%), respectively of total floristic composition. Cluster analysis resulted in five different plant communities and this result was supported by the ordination result. RDA result showed altitude was the main environmental variable in determining the plant communities. The ANOVA test indicated that the five community types differ significantly from each other with regard to Electrical Conductivity and Potassium. Conclusions: Description of floristic diversity of species in Gerba Dima forest revealed the presence of high species diversity and richness. The presence of endemic plant species in the study forest shows the potential of the area for biodiversity conservation.

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