Three new species of the genus Aphidius (Hymenoptera, Braconidae, Aphidiinae) from South Korea

Several species of the genus Aphidius are well known as commercial biocontrol agents of pest aphids, and more than 130 species of the genus have been recorded worldwide. To date, only 15 Aphidius species have been recorded in South Korea. Using the DNA barcode region (ca. 658 bp) of mitochondrial cytochrome c oxidase subunit I (COI), we amplified sequences of 15 Aphidius Korean species, aligned them in combination with 23 reference species retrieved from GenBank for comparison and identification, and then reconstructed a barcode phylogeny by the neighbour-joining method. As a result, three Aphidius species were found to be new to Science. Descriptions and illustrations of the three species new to Science – Aphidius longicarpussp. nov., A. longistigmussp. nov., and A. asiaticussp. nov. – are provided, together with their phylogenetic position within the genus Aphidius. In addition, a redescription of A. areolatus, a parasitoid of maple aphids (Peryphillus spp.), is also given.

The version of microevolutionary relationships between biotypes close to Elymus caninus (Poaceae) according to the sequencing of the nuclear gene GBSS1 (waxy)

A comparative study of the sequences of the GBSS1 gene fragment in accessions of species close to Elymus caninus:E. prokudinii, E. viridiglumis, E. goloskokovii, as well as a number of morphologically deviating forms (MDF) from the territoryof Russia and Kazakhstan was carried out. The StH-genomic constitution was established or confirmed in all studied taxa andMDF, and the microevolutionary relationships between species were assessed by constructing separate NJ dendrograms based onexons and introns together and exons only. Differences in the location of Y subgenomes in reference StY-genomic species on twotypes of constructed dendrograms were noted. Possible evolutionary reasons for these differences are discussed. A characteristicfeature of all taxa close to E. caninus is the presence of only St2clones of the St subgenome, which are closer in composition tothe North American ancestral line Pseudoroegneria spicata than to the Asiatic line ascending to P. strigosa. The reference Polishaccession E. caninus can_5274 is farthest from the Asian accessions in the St2subgenome, but closer to the diploid carrier ofthe St genome P. spicata. According to the levels of differentiation of the H subgenome, all putative relatives of E. caninus havevariants of the H1subgenome around the Asian diploid host Hordeum jubatum, while being divided into two distinct subgroups.Only the accessions of four reference species gravitate towards the North American species Hordeum californicum – the carrierof the H2gene variant. It should be noted that the gene variants of the Ural endemic E. uralensis are close to the main group ofE. caninus accessions in both subgenomes. Together with the results of sexual hybridization, this fact gives grounds to considerE. uralensis as closely related to the main group of taxa deserving the intraspecific rank of E. caninus s. l.

Discrimination between Eggs from Stink Bugs Species in Europe Using MALDI-TOF MS

In the current paper, we used a method based on stink bug egg-protein immobilization on filter paper by drying, followed by post-(storage and shipping) extraction in acidified acetonitrile containing matrix, to discriminate between nine different species using MALDI-TOF MS. We obtained 87 correct species-identifications in 87 blind tests using this method. With further processing of the unblinded data, the highest average Bruker score for each tested species was that of the cognate reference species, and the observed differences in average Bruker scores were generally large and the errors small except for Capocoris fuscispinus, Dolycoris baccarum, and Graphosoma italicum, where the average scores were lower and the errors higher relative to the remaining comparisons. While we observed clear discrimination between the nine species using this method, Halyomorpha halys and Piezodorus lituratus were more spectrally related than the other pairwise comparisons.

Spatial Congruence Analysis (SCAN): A method for detecting biogeographical patterns based on species range congruences

Species with congruent geographical distributions, potentially caused by common historical and ecological spatial processes, constitute biogeographical units called chorotypes. Nevertheless, the degree of spatial range congruence characterizing these groups of species is rarely used as an explicit parameter. Methods conceived for the identification of patterns of shared ranges often suffer from scale bias associated with the use of grids, or the incapacity to describe the full complexity of patterns, from core areas of high spatial congruence, to long gradients of range distributions expanding from these core areas. Here, we propose a simple analytical method, Spatial Congruence Analysis (SCAN), which identifies chorotypes by mapping direct and indirect spatial relationships among species. Assessments are made under a referential value of congruence as an explicit numerical parameter. A one-layered network connects species (vertices) using pairwise spatial congruence estimates (edges). This network is then analyzed for each species, separately, by an algorithm which searches for spatial relationships to the reference species. The method was applied to two datasets: a simulated gradient of ranges and real distributions of birds. The simulated dataset showed that SCAN can describe gradients of distribution with a high level of detail. The bird dataset showed that only a small portion of range overlaps is biogeographically meaningful, and that there is a large variation in types of patterns that can be found with real distributions. Species analyzed separately may converge on similar or identical groups, may be nested in larger chorotypes, or may even generate overlapped patterns with no species in common. Chorotypes can vary from simple ones, composed by few highly congruent species, to complex, with numerous alternative component species and spatial configurations, which offer insights about possible processes driving these patterns in distinct degrees of spatial congruence. Metrics such as congruence, depth, richness, and ratio between common and total areas can be used to describe chorotypes in detail, allowing comparisons between patterns across regions and taxa.

Modelling the Material Resistance of Wood—Part 1: Utilizing Durability Test Data Based on Different Reference Wood Species

To evaluate the performance of new wood-based products, reference wood species with known performances are included in laboratory and field trials. However, different wood species vary in their durability performance, and there will also be a within-species variation. The primary aim of this paper was to compare the material resistance against decay fungi and moisture performance of three European reference wood species, i.e., Scots pine sapwood (Pinus sylvestris), Norway spruce (Picea abies), and European beech (Fagus sylvatica). Wood material was collected from 43 locations all over Europe and exposed to brown rot (Rhodonia placenta), white rot (Trametes versicolor) or soft rot fungi. In addition, five different moisture performance characteristics were analyzed. The main results were the two factors accounting for the wetting ability (kwa) and the inherent protective properties of wood (kinh), factors for conversion between Norway spruce vs. Scots pine sapwood or European beech for the three decay types and four moisture tests, and material resistance dose (DRd) per wood species. The data illustrate that the differences between the three European reference wood species were minor, both with regard to decay and moisture performance. The results also highlight the importance of defined boundaries for density and annual ring width when comparing materials within and between experiments. It was concluded that with the factors obtained, existing, and future test data, where only one or two of the mentioned reference species were used, can be transferred to models and prediction tools that use another of the reference species.

Cytogenomics Unveil Possible Transposable Elements Driving Rearrangements in Chromosomes 2 and 4 of Solea senegalensis

Cytogenomics, the integration of cytogenetic and genomic data, has been used here to reconstruct the evolution of chromosomes 2 and 4 of Solea senegalensis. S. senegalensis is a flat fish with a karyotype comprising 2n = 42 chromosomes: 6 metacentric + 4 submetacentric + 8 subtelocentric + 24 telocentric. The Fluorescence in situ Hybridization with Bacterial Artificial Chromosomes (FISH-BAC) technique was applied to locate BACs in these chromosomes (11 and 10 BACs in chromosomes 2 and 4, respectively) and to generate integrated maps. Synteny analysis, taking eight reference fish species (Cynoglossus semilaevis, Scophthalmus maximus, Sparus aurata, Gasterosteus aculeatus, Xiphophorus maculatus, Oryzias latipes, Danio rerio, and Lepisosteus oculatus) for comparison, showed that the BACs of these two chromosomes of S. senegalensis were mainly distributed in two principal chromosomes in the reference species. Transposable Elements (TE) analysis showed significant differences between the two chromosomes, in terms of number of loci per Mb and coverage, and the class of TE (I or II) present. Analysis of TE divergence in chromosomes 2 and 4 compared to their syntenic regions in four reference fish species (C. semilaevis, S. maximus, O. latipes, and D. rerio) revealed differences in their age of activity compared with those species but less notable differences between the two chromosomes. Differences were also observed in peaks of divergence and coverage of TE families for all reference species even in those close to S. senegalensis, like S. maximus and C. semilaevis. Considered together, chromosomes 2 and 4 have evolved by Robertsonian fusions, pericentric inversions, and other chromosomal rearrangements mediated by TEs.

Spatial Congruence Analysis (SCAN): An objective method for detecting biogeographical patterns based on species’ range congruences

Similar species ranges may represent outcomes of common biological processes and so form the basis for biogeographical concepts such as areas of endemism and ecoregions. Nevertheless, spatial range congruence is rarely quantified, much less incorporated in bioregionalization methods as an explicit parameter. Furthermore, most available methods suffer from limitations related to the loss, or the excess of range information, or scale bias associated with the use of grids, and the incapacity to recognize independent overlapped patterns or gradients of range distributions. Here, we propose an analytical method, Spatial Congruence Analysis (SCAN), to identify biogeographically meaningful groups of species, called biogeographic elements. Such elements are based on direct and indirect spatial relationships among species’ ranges and vary depending on an explicit measure of range congruence controlled as a numerical parameter in the analysis. A one-layered network connects species (vertices) using pairwise spatial congruence estimates (edges). This network is then analyzed for each species, separately, by an algorithm that accesses the entire web of spatial relationships to the reference species. The method was applied to two datasets: a simulated gradient of ranges and real distributions of birds. The gradient results showed that SCAN can describe gradients of distribution with a high level of detail, without confounding transition zones with true biogeographical units, a frequent pitfall of other methods. The bird dataset showed that only a small portion of range overlaps is biogeographically meaningful, and that there is a large variation in types of patterns that can be found with real distributions. Distinct reference species may converge on similar or identical groups of spatially related species, may lead to recognition of nested species groups, or may even generate similar spatial patterns with no species in common. The biological significance or causal processes of these patterns should be investigated a posteriori. Patterns can vary from simple ones, composed by few highly congruent species, to complex, with numerous alternative component species and spatial configurations, depending on particular parameter settings as determined by the investigator. This approach eliminates or reduces limitations of other methods and permits pattern description without hidden assumptions about processes, and so should make a valuable contribution to the biogeographer’s toolbox.“If there is any basic unit of biogeography, it is the geographic range of a species.” - Brown, Stevens & Kaufman [1].“[spatial] congruence […] should be optimized, while realizing that this criterion will most likely never be fully met” - HP Linder [2].

Microevolutionary relationships between biotypes of Elymus confusus, E. peschkovae, and E. sibiricus (Poaceae) according to hybridization and sequencing of the nuclear gene GBSS1 (waxy)

According to descriptions, the Siberian species E. peschkovae and E. confusus differ in the presence or absence of trichomes on lemma and rachilla surfaces only. Two methods were used for study microevolutionary relationships between these species: hybridization of biotypes from different locations and analysis of nucleotide sequences of the low-copy nuclear gene GBSS1. Created and grown hybrids in combinations AMU-8804 × BER-0807 and AMU-8804 × BUK-1109 showed complete seed sterility in two field vegetations. Taking into account wide species areas, 3 hybrids were created between Magadan biotypes from a common habitat in the combination E. confusus MOL1887 × E. peschkovae MOL-1882. The plants showed seed fertility (SF) of 0–3 %. This result does not obscure the possibility to assess SF in the F2 generation and the character of inheritance of diagnostic traits. A comparative study of the GBSS1 gene sequences in accessions was carried out in comparison with clones of reference species. Differentiation of clones by the St2 subgenome in E. confusus, E. peschkovae, E. sibiricus and E. caninus did not reveal a clear relationships between the species. Meanwhile, a certain species specificity for the H1 subgenome was noted, confirming the existence of microevolutionary isolation of these species.

RUSSIAN FRITILLARIA (FRITILLARIA RUTENICA WIKSTR.) - A STANDARD VIEW OF FOREST-STEPPE CALCIUM LANDSCAPES OF ULYANOVSK VOLTAGE

The article discusses the current state of a rare and protected species - Russian fritillary (Fritillaria ruthenica Wikstr.), as a characteristic and reference species of calcium forest-steppe landscapes of the Ulyanovsk region of the Volga Upland and their role as conservation centers for this vulnerable species.