common garden experiment
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2022 ◽  
Vol 56 ◽  
pp. 101137
Author(s):  
Carmen Romeralo ◽  
Jorge Martín-García ◽  
Pablo Martínez-Álvarez ◽  
E. Jordán Muñoz-Adalia ◽  
Danilo Reis Gonçalves ◽  
...  

2022 ◽  
Author(s):  
Laura Morales ◽  
Kelly Swarts

We leveraged publicly available data on juvenile tree height of 299 Central European Norway spruce populations grown in a common garden experiment across 24 diverse trial locations in Austria and weather data from the trial locations and population provenances to parse the heritable and climatic components of tree height variation. Principal component analysis of geospatial and weather variables demonstrated high interannual variation among trial environments, largely driven by differences in precipitation, and separation of population provenances based on altitude, temperature, and snowfall. Tree height was highly heritable and genetic variation for tree height was strongly associated with climatic relationships among population provenances. Modeling the covariance between populations and trial environments based on climatic data increased the heritable signal for tree height.


2021 ◽  
Vol 118 (48) ◽  
pp. e2105207118
Author(s):  
Olivia M. Ahern ◽  
Kerry A. Whittaker ◽  
Tiffany C. Williams ◽  
Dana E. Hunt ◽  
Tatiana A. Rynearson

Phytoplankton support complex bacterial microbiomes that rely on phytoplankton-derived extracellular compounds and perform functions necessary for algal growth. Recent work has revealed sophisticated interactions and exchanges of molecules between specific phytoplankton–bacteria pairs, but the role of host genotype in regulating those interactions is unknown. Here, we show how phytoplankton microbiomes are shaped by intraspecific genetic variation in the host using global environmental isolates of the model phytoplankton host Thalassiosira rotula and a laboratory common garden experiment. A set of 81 environmental T. rotula genotypes from three ocean basins and eight genetically distinct populations did not reveal a core microbiome. While no single bacterial phylotype was shared across all genotypes, we found strong genotypic influence of T. rotula, with microbiomes associating more strongly with host genetic population than with environmental factors. The microbiome association with host genetic population persisted across different ocean basins, suggesting that microbiomes may be associated with host populations for decades. To isolate the impact of host genotype on microbiomes, a common garden experiment using eight genotypes from three distinct host populations again found that host genotype influenced microbial community composition, suggesting that a process we describe as genotypic filtering, analogous to environmental filtering, shapes phytoplankton microbiomes. In both the environmental and laboratory studies, microbiome variation between genotypes suggests that other factors influenced microbiome composition but did not swamp the dominant signal of host genetic background. The long-term association of microbiomes with specific host genotypes reveals a possible mechanism explaining the evolution and maintenance of complex phytoplankton–bacteria chemical exchanges.


2021 ◽  
Author(s):  
Alain Migeon ◽  
Philippe Auger ◽  
Odile Fossati ◽  
Ruth A Hufbauer ◽  
Maeva Miranda ◽  
...  

The effects of drought stress on plants and phytophagous arthropods are topics currently extensively investigated in the context of climate change. Dryness not only impacts cultivated plants but also their parasites, which in some cases are favoured by drought. It represents a major challenge that agriculture is facing in a perspective of intensification of drought. Direct effects of drought on herbivorous arthropods typically produce bigger offspring and faster development but attractiveness can also occur. However, how much responses to abiotic factors differ among populations of a species remains poorly documented. The impact of drought-stressed plants on key life-history parameters is here investigated for a major agricultural pest, the two spotted spider mite, Tetranychus urticae, depending on the climatic conditions of the localities at origin. Sampled localities represent a rather wide range of core climate conditions across the mite s native distribution area with contrasting climatic profiles, ranging from wet temperate to cool Atlantic localities to medium to dry hot Mediterranean localities. Plant drought stress effects on mites was estimated by measuring four life history traits: development time, fecundity, sex-ratio and emigration rate in a common garden experiment made of two modalities: well-watered and drought-stressed bean plants. Mites feeding on drought-stressed plants displayed shorter developmental time and attempted to leave leaf patches less often, and young females were more fecund. The mites originating from wet temperate to cool Atlantic localities respond more strongly to drought than mites originating from medium to dry hot Mediterranean localities, suggesting local adaptation of T. urticae populations to various aridity values and indicates that mite feeding behaviour is shaped by the climatic conditions they faced in the area of origin.


Forests ◽  
2021 ◽  
Vol 12 (7) ◽  
pp. 930
Author(s):  
Saša Kostić ◽  
Saša Orlović ◽  
Velisav Karaklić ◽  
Lazar Kesić ◽  
Martina Zorić ◽  
...  

This paper presents an analysis of the radial growth, tree dimensions, and allometry of three phenological pedunculate oak (Quercus robur L.; QURO) varieties (early (E-QURO), typical (T-QURO), and late (L-QURO)), from a common garden experiment. We focused on the resistance and resilience of each variety to drought events, which occurred in 2012 and 2017, as well as their recovery potential during juvenile and mature growth phases, with the goal of clarifying how QURO drought sensitivity is influenced by tree phenology and growth stage. Our results indicate that E-QURO is more drought resistant, while T-QURO and L-QURO exhibit greater recovery potential after a drought event. Hence, typical and late QURO varieties are better prepared to withstand climate change. We also noted differences in the physical dimensions and the allometry of the studied QURO varieties. On average, 21-year-old QURO specimens from the analyzed stand are 9.35 m tall, have a crown width (CW) of 8.05 m, and a diameter at breast height (DBH) of 23.71 cm. Although T-QURO varieties had the greatest DBH and CW, they were shorter than E- and L-QURO, which are similar in height. T-QURO is also shorter relative to DBH, while L-QURO has a wider crown relative to tree height (TH). Intra-variety variations are higher than variations among half-sib (open-pollinated) families of each variety. Moreover, the adopted regression model provided a better fit to the CW/DBH ratio than to TH/DBH and CW/TH.


2021 ◽  
Vol 12 ◽  
Author(s):  
Shanshan Zhou ◽  
Xia Yan ◽  
Jian Yang ◽  
Chaoju Qian ◽  
Xiaoyue Yin ◽  
...  

Agriophyllum squarrosum (L.) Moq., a pioneer plant endemic to the temperate deserts of Asia, could be domesticated into an ideal crop with outstanding ecological and medicinal characteristics. A previous study showed differential flavonoid accumulation between two in situ altitudinal ecotypes. To verify whether this accumulation was determined by environmental or genetic factors, we conducted flavonoid-targeted metabolic profiling among 14 populations of A. squarrosum collected from regions with different altitudes based on a common garden experiment. Results showed that the most abundant flavonoid in A. squarrosum was isorhamnetin (48.40%, 557.45 μg/g), followed by quercetin (13.04%, 150.15 μg/g), tricin (11.17%, 128.70 μg/g), isoquercitrin (7.59%, 87.42 μg/g), isovitexin (7.20%, 82.94 μg/g), and rutin (7.00%, 80.62 μg/g). However, based on a common garden at middle-altitude environment, almost none of the flavonoids was enriched in the high-altitude populations, and even some flavonoids, such as quercetin, tricin, and rutin, were significantly enriched in low-altitude populations. This phenomenon indicated that the accumulation of flavonoids was not a result of local adaptation to high altitude. Furthermore, association analysis with in situ environmental variables showed that the contents of quercetin, tricin, and rutin were strongly positively correlated with latitude, longitude, and precipitation gradients and negatively correlated with temperature gradients. Thus, we could conclude that the accumulations of flavonoids in A. squarrosum were more likely as a result of local adaption to environmental heterogeneity combined with precipitation and temperature other than high altitude. This study not only provides an example to understand the molecular ecological basis of pharmacognosy, but also supplies methodologies for developing a new industrial crop with ecological and agricultural importance.


2021 ◽  
Vol 12 ◽  
Author(s):  
Yanjun Guo ◽  
Xiao Zhao ◽  
Yang Li ◽  
Zhen Li ◽  
Qianlin Xiao ◽  
...  

Cuticular waxes covering the plant surface play pivotal roles in helping plants adapt to changing environments. However, it is still not clear whether the responses of plant cuticular waxes to their growing environments are inheritable. We collected seeds of Medicago ruthenica (a perennial legume) populations from 30 growing sites in northern China and examined the variations of leaf cuticular waxes in a common garden experiment. Four wax genes, MrFAR3-1, MrFAR3-2, MrCER1, and MrKCS1, involved in biosynthesis of predominant wax classes (primary alcohol and alkane) and wax precursors, were isolated to test the contributions of genetic variations of the coding sequences (CDS) and the promoter sequences and epigenetic modifications. The plasticity responses of the cuticular waxes were further validated by two stress-modeling experiments (drought and enhancing ultraviolet B). Great variations in total wax coverage and abundance of wax classes or wax compounds were observed among M. ruthenica populations in a common garden experiment. Stress-modeling experiments further validated that M. ruthenica would alter leaf wax depositions under changed growing conditions. The transcriptional levels of the wax genes were positively or negatively correlated with amounts of cuticular waxes. However, the analysis of promoter methylation showed that the methylation level of the promoter region was not associated with their expressions. Although both promoter sequences and CDS showed a number of polymorphic sites, the promoters were not naturally selected and insignificant difference could be observed in the numbers and types of acting elements of the four wax genes among populations. In contrast, the CDS of the wax genes were naturally selected, with a number of missense mutations resulting in alterations of the amino acid as well as their isoelectric points and polarities, which could impact on enzyme function/activity. We conclude that long-term adaptation under certain environments would induce genetic mutation of wax biosynthesis genes, resulting in inheritable alterations of cuticular wax depositions.


2021 ◽  
pp. 1-6
Author(s):  
Jessica S. Ambriz ◽  
Clementina González ◽  
Eduardo Cuevas

Abstract Fuchsia parviflora is a dioecious shrub that depends on biotic pollination for reproduction. Previous studies suggest that the male plants produce more flowers, and male-biased sex ratios have been found in some natural populations. To assess whether the biased sex ratios found between genders in natural populations are present at the point at which plants reach sexual maturity, and to identify possible trade-offs between growth and reproduction, we performed a common garden experiment. Finally, to complement the information of the common garden experiment, we estimated the reproductive biomass allocation between genders in one natural population. Sex ratios at reaching sexual maturity in F. parviflora did not differ from 0.5, except in one population, which was the smallest seedling population. We found no differences between genders in terms of the probability of germination or flowering. When flowering began, female plants were taller than males and the tallest plants of both genders required more time to reach sexual maturity. Males produced significantly more flowers than females, and the number of flowers increased with plant height in both genders. Finally, in the natural population studied, the investment in reproductive biomass was seven-fold greater in female plants than in male plants. Our results showed no evidence of possible trade-offs between growth and reproduction. Despite the fact that female plants invest more in reproductive biomass, they were taller than the males after flowering, possibly at the expense of herbivory defence.


Weed Science ◽  
2021 ◽  
pp. 1-26
Author(s):  
Zdenka Martinková ◽  
Alois Honěk ◽  
Stano Pekár ◽  
Leona Leisova-Svobodová

Abstract In Central Europe, barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.], has been originally common in humid lowland areas. As a result of the introduction of new crops and farming practices, in the northwest Carpathians, E. crus-galli has spread from lowland (< 200 m altitude) to highland (> 400 m altitude) areas. We collected seed samples from local populations lying at a distance of approximately 5 km from each other and lined up along transects following the flows of two rivers. The rivers first flow through the valleys separated by mountain ridges and eventually flow into a common lowland. After ripening, the seeds of all populations were germinated at 25°C under long-day conditions. Only the seeds of some lowland populations germinated up to 75 percentage. The frequency of germinated seeds decreased with the altitude of population origin, and above 200 m a.s.l., germination was mostly zero. We then studied the phenological and morphological differentiation of plants from the original (lowland) and recently occupied (highland) areas. Seeds of the lowest and the highest localities lying on the transect of each river were sown in a common garden experiment. In plants from the highland localities, heading and seed dispersal were earlier, while tiller height and tiller mass were lower than in plants from the lowland localities. Seed mass produced per tiller in the lowland and highland plants was similar, and, as a result, highland plants allocated a larger proportion of body mass to seed production than did lowland plants. Echinochloa crus-galli populations from highland localities thus produce their progeny earlier and at a lower energy cost than populations from lowland localities. The plasticity of phenological characters likely facilitated adaptation during E. crus-galli spread from lowlands to highlands. Similar adaptations in plant phenology may contribute to the spread of E. crus-galli in other geographic areas.


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