Avian Bornaviruses in Wild Aquatic Birds of the Anseriformes Order in Poland

Bornaviruses are a diverse family of viruses infecting various hosts, including birds. Aquatic bird bornavirus 1 (ABBV-1) and aquatic bird bornavirus 2 (ABBV-2) have been found in wild waterfowl but data on their prevalence are scarce. To gain knowledge on the occurrence of ABBVs in Poland, samples originating from dead birds of the Anseriformes order collected in 2016–2021 were tested with a real time RT-PCR method targeting the ABBVs genome. A total of 514 birds were examined, including 401 swans, 96 ducks and 17 geese. The presence of ABBV-1 RNA was detected in 52 swans (10.1% of all tested birds) from 40 different locations. No positive results were obtained for ducks and geese. Sequences of about 2300 bases were generated for 18 viruses and phylogenetic analysis was performed. A relatively low genetic diversity of the examined ABBV-1 strains was observed as all were gathered in a single cluster in the phylogenetic tree and the minimum nucleotide identity was 99.14%. The Polish strains were closely related to ABBV-1 identified previously in Denmark and Germany, but a limited number of sequences from Europe hinders the drawing of conclusions about interconnections between Polish and other European ABBVs. The results of the present study provide new insights into the distribution and genetic characteristics of ABBVs in wild birds in Europe.

An examination of trends in the growing scientific literature on approaching wildlife with drones

Drones or unoccupied aerial vehicles are rapidly being used for a spectrum of applications, including replacing traditional occupied aircraft as a means of approaching wildlife from the air. Though less intrusive to wildlife than occupied aircraft, drones can still cause varying levels of disturbance. Policies and protocols to guide lowest-impact drone flights are most likely to succeed if considerations are derived from knowledge from scientific literature. This study examines trends in the scientific literature on using drones to approach wildlife between 2000 and 2020, specifically in relation to the type of publications, scientific journals works are published in, the purposes of drone flights reported, taxa studied, and locations of studies. From 223 publications, we observed a large increase in relevant scientific literature, the majority of which were peer-reviewed articles published across 87 scientific journals. The largest proportions of peer-reviewed research articles related to aquatic mammals or aquatic birds, and the use or trial of drone flights for conducting population surveys, animal detection or investigations of animal responses to drone flights. The largest proportion of articles were studies conducted in North America and Australia. Since animal responses to drone flights vary between taxa, populations, and geographic locations, we encourage further growth in the volume of relevant scientific literature needed to inform policies and protocols for specific taxa and/or locations, particularly where knowledge gaps exist.

Wanted not, wasted not: Searching for non-target taxa in environmental DNA metabarcoding by-catch

Metabarcoding of environmental DNA is based on primers that are specific to the target taxa (e.g. bacteria, zooplankton, fishes). However, due to the nature of the commonly used protocols, regardless of the chosen primers, several sequences of non-target species will inevitably be generated, but are usually discarded in commonly used bioinformatics pipelines. These non-target sequences might contain important biological information about the presence of other species in the studied habitats and its potential for ecological studies is still poorly understood. Here, we analyzed the presence of mammal and bird species in aquatic environmental samples that were originally amplified targeting teleost fish species. After all cleaning and checking steps, we kept 21 amplicon sequence variants (ASVs) belonging to mammals and ten to birds. Most ASVs were taxonomic assigned to farm/domestic animals, such as cats, cows, and ducks. Yet, we were able to identify a native semi-aquatic mammal, the capybara, in the samples. Four native bird species and a non-native potentially invasive bird (Corvus sp.) were also detected. Although the data derived from these samples for mammals and birds are of limited use for diversity analyses, our results demonstrate the potential of aquatic samples to characterize non-aquatic birds and highlight the presence of a potentially invasive species that had not been recorded before in the region.

Detection of a Novel Reassortant H9N9 Avian Influenza Virus in Free-Range Ducks in Bangladesh

Wild aquatic birds are the primary natural reservoir for influenza A viruses (IAVs). In this study, an A(H9N9) influenza A virus (A/duck/Bangladesh/44493/2020) was identified via routine surveillance in free-range domestic ducks in Bangladesh. Phylogenetic analysis of hemagglutinin showed that the H9N9 virus belonged to the Y439-like lineage. The HA gene had the highest nucleotide identity to A/Bean Goose (Anser fabalis)/South Korea/KNU 2019-16/2019 (H9N2). The other seven gene segments clustered within the Eurasian lineage.

Sequencing and phylogenetic analysis of the stn gene of Salmonella species isolated from different environmental sources at Lake Qarun protectorate: The role of migratory birds and public health importance

Background and Aim: Salmonella causes most foodborne bacterial illnesses worldwide. It is found in various hosts, including pets, farm animals, and wild animals, as well as the environment. This study aimed to examine the epidemiological relationship between Salmonella isolates from aquatic environments and those from other avian hosts. Materials and Methods: The study examined 12 water samples, 210 aquatic animals, and 45 migratory aquatic bird samples collected from the protected area of Lake Qarun in El-Fayoum Governorate, Egypt, during migration seasons from different waterfowl migration areas (from October 2018 to January 2019). In addition, 45 fecal samples from domestic chickens were collected from the same geographic location from poultry farms. Bacteriological examination and polymerase chain reaction assay of two virulence genes (i.e., invA and stn) were performed to isolate and identify Salmonella. Results: Salmonella was isolated from 58.3% (7/12) of Lake Qarun water samples, 13.3% (6/45) of migratory waterfowl, 6.6% of (3/45) of chickens (Gallus gallus domesticus), and 4.3% (3/70) of fish and pooled brine shrimp. In migratory aquatic bird species that were sampled, Salmonella were isolated from 23.1% (3/13) of Eurasian coot (Fulica atra), 12.5%, (1/8) of green-winged teal (Anas cardolinesis), 10% (2/20) of northern shoveler (Spatula clypeata), and 0% (0/4) of mallard duck (Anas platyrhynchos). In 35 Tilapia, Salmonella was isolated by (8.6%) 5.7% of external surfaces, 2.85% from the intestine, and 0% from the muscle. No Salmonella was isolated from the 175 brine shrimp samples. Phylogenetic analysis using the stn genes of Salmonella isolated from the aquatic environment, migratory aquatic birds, and chicken showed a strong association between these isolates. In addition, a higher nucleotide identity percentage was observed between the sequences recovered from migratory aquatic birds and Lake Qarun water samples. Conclusion: Salmonella distribution was confirmed through migratory aquatic birds, based on our phylogeny tree analysis, Salmonella considered a likely carrier of zoonotic bacterial pathogens. Furthermore, the close relationship between chicken and fish sequences highlights the scenarios of using chicken manure in fish farms and its public health implications. The presence of Salmonella in different environmental sources spotlights the urgent need to control and break down its epidemiological cycle.

Histopathological effects of the nematode Amidostomum acutum on the small intestines of two aquatic birds: Fulica atra and Gallinula chloropus

The small intestine of two rallid aquatic birds (Fulica atra Linnaeus, 1758 and Gallinula chloropus (Linnaeus, 1758) from Bahr Al-Najaf depression, southwest of Al-Najaf city, mid-Iraq), were infected with the nematode Amidostomum acutum Seurat, 1918 with a prevalence of 25% and 50%, respectively, and a mean intensity of 24.5 and 30, respectively. The infected birds showed several gross pathological and microscopic lesions in their small intestine due to the infection with this nematode. The gross lesions included hypertrophy in the anterior part of the duodenum and small rough nodules on the small intestine wall. Microscopic lesions included necrosis and shortening of villi with their fullness with inflammatory cells, degeneration of villi, and an increased number of acini at the base of the intestinal villi.

Contributions to the study of water and semiaquatic birds in the Ramsar Wetland ”lower Prut lakes”

The Republic of Moldova has few wet areas. One of them was designated in the year 2000 with the status of Wetland of International Importance (Ramsar). The ecosystems of lakes and ponds are home to a multitude of bird species. Aquatic and semi-aquatic species make up a major component of the studied sector and consists of 94 species. Thousands of specimens transit the area during spring and autumn migrations; others retreat in the winter to be safe and to feed; the summer guests arrive in the warm period of the year to breed. Out of the total number of aquatic and semi-aquatic birds, 26 species are protected nationally and internationally. During the study period, rare or accidental species were recorded, such as: Bubulcus ibis, Cygnus columbianus, Branta ruficollis, Grus grus, Sterna caspia, Arenaria interpres, Larus ichthyaetus etc.

Habitat of birds in Kambaramayana

Kambar one of the great epic story writer. In his one epic gives more importance about marine aquatic animals and their life styles. He also sang naturals beauty things like trees, animals, reptiles and give more or less, information about 50 types of birds. He tells about both animals and birds, but particular give clear information related to birds. His information almost related to sangam literature works. So this present work give information about aquatic birds and their life habits based on kambar’s given information.

The Bird Community in a Coastal Wetland in East China and Its Spatial Responses to a Wind Farm

Coastal wetlands in East China are essential stopover places for birds along the East Asian-Australian Flyway. However, numerous wind turbines have been built in or near these wetlands in recent years, which might disturb the bird community in the area. Therefore, investigating the bird community and its responses to wind farms in coastal wetlands of East China is of great significance for bird conservation. In the spring and autumn of 2019 and 2020, we investigated the bird community in the Rudong coastal wetland in East China using point counts. We determined 4 geographical factors at each census point, i.e., distance to the wind farm boundary (DW), distance to the suburbs, distance to the sea, and vegetation area, and analysed the relationship between bird number and DW through partial correlation analysis. A total of 11 orders and 103 species of birds, including 4 endangered species, were observed during our survey. Charadriiformes was the dominant taxon in the wetland, and Calidris alpina was the most common species in both spring and autumn. Passeriformes exhibited high species richness but low numbers. The results of partial correlation analysis indicated that birds’ responses to the wind farm varied depending on their dominance and category: dominant and subdominant birds tended to avoid the wind farm, whereas rare birds tended to approach them; aquatic birds were alert to the wind farm, whereas terrestrial birds better adapted to them. We concluded that the dominant aquatic birds, including the endangered species Calidris tenuirostris, were most negatively impacted by the wind farm; the occasional birds and rare aquatic birds might be disturbed by wind farm but not significantly so; and the rare terrestrial birds were least disturbed by or even benefited from the wind farm.

Molecular Identification of Cryptosporidium spp. and Giardia spp. in Wild Birds in Southeastern Brazil

Introduction: The identification of Cryptosporidium spp., Giardia spp. and Enterocytozoon bieneusi in birds is relevant since these animals can act as disseminators of these parasites to humans through environmental contamination. The aim of this study was to determine the molecular occurrence of Cryptosporidium spp. and Giardia spp. in wild birds in southeastern Brazil and genetically characterize the isolates obtained. Methods: A total of 256 fecal samples were collected from 172 captive and 84 free-living wild birds. The DNA extracted was subjected to nested-PCR and semi-nested PCR analysis for amplification of fragments of the 18S rDNA and gdh genes of Cryptosporidium spp. and Giardia spp., respectively. Results: With respect to Cryptosporidium spp., the overall occurrence was 3.91%. Of samples from captive wild birds, six (3.49%) were positive: two waterfowl and four non-aquatic birds. Among the samples from free-living wild birds, four (4.76%) were positive, all non-aquatic birds. Regarding Giardia spp., the overall occurrence was 3.1%. Of samples from captive wild birds, four (2.32%) were positive, all waterfowl; of the samples from free-living wild birds, four (4.76%) were positive for the parasite, all non-aquatic birds. Conclusions: The presence of C. meleagridis and G. duodenalis assemblage B suggests that epidemiological studies involving wild birds and humans are needed to better understand the impact of avian cryptosporidiosis and giardiasis on avian health and their possible implications for public health.