dna microarray analysis
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2021 ◽  
pp. 139-153
Author(s):  
Sandeep Kumar ◽  
Shruti Shandilya ◽  
Suman Kapila ◽  
Mohit Sharma ◽  
Nikhil Agrawal

Cosmetics ◽  
2021 ◽  
Vol 8 (3) ◽  
pp. 60
Author(s):  
Hisae Aoshima ◽  
Masayuki Ito ◽  
Rinta Ibuki ◽  
Hirokazu Kawagishi

In this study, we verified the effects of 2-aza-8-oxohypoxanthine (AOH) on human epidermal cell proliferation by performing DNA microarray analysis. Cell proliferation was assessed using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay, which measures mitochondrial respiration in normal human epidermal keratinocyte (NHEK) cells. Gene expression levels were determined by DNA microarray analysis of 177 genes involved in skin aging and disease. AOH showed a significant increase in cell viability at concentrations between 7.8 and 31.3 μg/mL and a significant decrease at concentrations above 250 μg/mL. DNA microarray analysis showed that AOH significantly increased the gene expression of CLDN1, DSC1, DSG1, and CDH1 (E-cadherin), which are involved in intercellular adhesion and skin barrier functioning. AOH also up-regulated the expression of KLK5, KLK7, and SPIMK5, which are proteases involved in stratum corneum detachment. Furthermore, AOH significantly stimulated the expression of KRT1, KRT10, TGM1, and IVL, which are considered general differentiation indicators, and that of SPRR1B, a cornified envelope component protein. AOH exerted a cell activation effect on human epidermal cells. Since AOH did not cause cytotoxicity, it was considered that the compound had no adverse effects on the skin. In addition, it was found that AOH stimulated the expression levels of genes involved in skin barrier functioning by DNA microarray analysis. Therefore, AOH has the potential for practical use as a cosmetic ingredient. This is the first report of efficacy evaluation tests performed for AOH.


Pathogens ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 97
Author(s):  
Wedad Ahmed ◽  
Heinrich Neubauer ◽  
Herbert Tomaso ◽  
Fatma Ibrahim El Hofy ◽  
Stefan Monecke ◽  
...  

This study aimed to investigate the prevalence and antimicrobial resistance of enterococci- and ESBL-producing E. coli isolated from milk of bovine mastitis cases in Egypt. Fifty milk samples of dairy animals were collected from localities in the Nile Delta region of Egypt. Isolates were identified using MALDI-TOF MS, and antibiotic susceptibility testing was performed by the broth microdilution method. PCR amplifications were carried out, targeting resistance-associated genes. Seventeen Enterococcus isolates and eight coliform isolates could be cultivated. Vancomycin resistance rate was high in Ent. faecalis. The VITEK 2 system confirmed all E. coli isolates as ESBL-producing. All Ent. faecalis isolates harbored erm(B), tetL and aac-aphD genes. The vanA gene was detected in Ent. faecalis isolate, vanB was found in other Enterococcus, while one isolate of E. casseliflavus exhibited the vanA gene. E. coli isolates exhibited high prevalence of erm(B) and tetL. E. coli isolates were analyzed by DNA microarray analysis. Four isolates were determined by O-serotyping as O8 (n = 1), O86 (n = 2) and O157 (n = 1). H-serotyping resulted in H11, H12, H21 (two isolates each) and one was of H16 type. Different virulence-associated genes were detected in E. coli isolates including lpfA, astA, celB, cmahemL, intI1 and intI2, and the iroN gene was identified by DNA microarray analysis.


2021 ◽  
pp. 85-101
Author(s):  
Satish Chandra Pandey ◽  
Saurabh Gangola ◽  
Saurabh Kumar ◽  
Prasenjit Debborma ◽  
Deep Chandra Suyal ◽  
...  

2020 ◽  
Vol 19 (3) ◽  
pp. 171-178
Author(s):  
Masatoshi Suzuki ◽  
Chen Wang ◽  
Fengzhu Zhang ◽  
Ujjal K. Bhawal ◽  
Hidenori Yamaguchi ◽  
...  

2020 ◽  
Author(s):  
Takahiro Adachi ◽  
Kunihiko Kotake ◽  
Kiyoaki Kato ◽  
Kosuke Tanimoto ◽  
Shinya Munekata

Abstract Oryza sativa L. subsp. japonica cultivar Yuhikikari is proposed to alleviate atopic dermatitis, although its mechanism is unclear. To clarify this issue, we evaluated the effect of Yukihikari on the immune system in vitro and in vivo by comparison with another Japanese cultivar Kirara397. A DNA microarray analysis of mouse spleen cells cultured with either Yukihikari or Kirara397 showed that Yukihikari-added spleen cells exhibited significantly reduced expression of pro-inflammatory genes. Furthermore, another transcriptome analysis of the cultivars by RNA sequencing showed a similar result to the DNA microarray analysis. Mice fed with Yukihikari had less germinal center B cells, fewer autoantibodies, and less weight than those fed with Kirara397. These results suggest that Yukihikari has immune-regulatory functions and accounts for its allergy-ameliorating effects.


2020 ◽  
Vol Volume 13 ◽  
pp. 3031-3043
Author(s):  
Hiroyuki Yokoyama ◽  
Takashi Hirai ◽  
Tetsuya Nagata ◽  
Mitsuhiro Enomoto ◽  
Hidetoshi Kaburagi ◽  
...  

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