charcoal rot
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2022 ◽  
Vol 52 (6) ◽  
Author(s):  
Erik Micael da Silva Souza ◽  
Leonardo Aparecido Brandão da Silva ◽  
Francisco Álef Carlos Pinto ◽  
Jerônimo Constantino Borel ◽  
Alexandre Sandri Capucho ◽  
...  

ABSTRACT: The fungi Macrophomina phaseolina is the charcoal rot causal agent, one of the most important cowpea crop disease in semiarid regions can causes 100% yield losses. The search for resistant genotypes requires efficient phenotyping. In addition, there is the problem of great variation in aggressiveness between isolates. This study aimed to 1) test three methods of inoculation in semiarid conditions, and 2) to evaluate the aggressiveness of isolates of M. phaseolina. In the first experiment carried out in greenhouse, the inoculations methods were evaluated, using two cowpea lines, three inoculation methods and three pathogen isolates. On the second experiment, fifteen M. phaseolina isolates were inoculated in one cultivar to evaluate their aggressiveness. By assessing the length of the lesions and the severity of the disease using an index, we identified the toothpick inoculation method as the most efficient. Toothpick method allowed to discriminate the genotypes and the aggressiveness of the pathogen.


2021 ◽  
Vol 33 (2) ◽  
pp. 357-361
Author(s):  
Maria Ghias ◽  
Salsabeel Rauf ◽  
Rizwana Qamar ◽  
Ahsan M.U. Din ◽  
Tariq Mahmood ◽  
...  


Plants ◽  
2021 ◽  
Vol 10 (12) ◽  
pp. 2630
Author(s):  
Saira Jazmín Martínez-Salgado ◽  
Petra Andrade-Hoyos ◽  
Conrado Parraguirre Lezama ◽  
Antonio Rivera-Tapia ◽  
Alfonso Luna-Cruz ◽  
...  

Charcoal rot is an emerging disease for peanut crops caused by the fungus Macrophomina phaseolina. In Mexico, peanut crop represents an important productive activity for various rural areas; however, charcoal rot affects producers economically. The objectives of this research were: (a) to identify and morphologically characterize the strain “PUE 4.0” associated with charcoal rot of peanut crops from Buenavista de Benito Juárez, belonging to the municipality of Chietla in Puebla, Mexico; (b) determine the in vitro and in vivo antagonist activity of five Trichoderma species on M. phaseolina, and (c) determine the effect of the incidence of the disease on peanut production in the field. Vegetable tissue samples were collected from peanut crops in Puebla, Mexico with the presence of symptoms of charcoal rot at the stem and root level. The “PUE 4.0” strain presented 100% identity with M. phaseolina, the cause of charcoal rot in peanut crops from Buenavista de Benito Juárez. T. koningiopsis (T-K11) showed the highest development rate, the best growth speed, and the highest percentage of radial growth inhibition (PIRG) over M. phaseolina (71.11%) under in vitro conditions, in addition, T. koningiopsis (T-K11) showed higher production (1.60 ± 0.01 t/ha−1) and lower incidence of charcoal rot under field conditions. The lowest production with the highest incidence of the disease occurred in plants inoculated only with M. phaseolina (0.67 ± 0.01 t/ha−1) where elongated reddish-brown lesions were observed that covered 40% of the total surface of the main root.


Plant Disease ◽  
2021 ◽  
Author(s):  
Huijie Wu ◽  
Chaohan Li ◽  
Chakraborti Priyanka ◽  
Zhen Guo ◽  
Bin Peng ◽  
...  

In June 2018 and 2019, charcoal rot-like symptoms and black microsclerotia suggestive of Macrophomina phaseolina infection were observed on the basal stems of citrullus lanatus cv. ‘Zaojia’, causing premature death. About 1 hectare of ‘Zaojia’ had been investigated, disease incidence rates were almost 50%, resulting in a 40% yield loss in a single field in Shanghai, China (31°23′N , 121°33′E). A fungus was consistently isolated from infected watermelon tissues. In total, 30 cuttings from 10 infected seedlings were surface disinfected with 3% sodium hypochlorite for 3 min, washed thrice with sterile distilled water, air dried, and transferred onto potato dextrose agar (PDA). Dishes were incubated for 3 days at 27°C in the dark. Twenty four single hypha subcultures were obtained from these samples and were cultured for an additional 5 days at 27°C. Colonies were initially white, and then became grey black (Fig.1A). During the more advanced stages of infection, black microsclerotia were produced that were spherical or ovoid in shape (Fig.1B). No sexual structures and conidia developed during culture on PDA. Isolate pathogenicity was assessed both in vitro and in vivo. Watermelon plants (cv. ‘Zaojia’) were grown in growth chambers at 28°C (day) and 23°C (night), with a 16 h photoperiod. When seedlings were 20 days old, they were inoculated. Briefly, a needle was used to puncture watermelon stems, and 5 mm agar plugs containing actively growing mycelia were placed on these needle wounds, followed by culture for 72 h at 27°C in a dark, humid chamber. In total, 10 seedlings were inoculated with 5 mm blank PDA, and the experiment was repeated three times, with the treatment being perfomed as described above. Seedling stems were inoculated 1-2 cm above the ground by puncturing them with a needle and then transferring 5 mm agar plugs containing fungi onto the wound sites. Seedlings were kept 75% humidity and then grown for 5 days at 27°C. Ten seedlings were inoculated per experiment. As a control, 10 seedlings were inoculated with 5 mm blank PDA plugs. Experiments were repeated three times. Necrotic spots around the wounds were evident on inoculated stems at 72 h (Fig.1C). Similarly, vascular tissue necrosis and the collapse of the surrounding pith and epidermis were observed on the residual parts of seedling stems after 5 days (Fig.1E), whereas control stems did not exhibit any disease related symptoms (Fig.1D, 1F). The same pathogen was then successfully re-isolated and was successfully regrown in pure culture, thus fulfilling Koch’s postulates. To identify the causative pathogen, total mycelial DNA was isolated via the CTAB method (Brandfass & Karlovsky, 2008), and the internal transcribed spacer (ITS) rDNA regions were amplified using the ITS1/ITS4 primers (White, 1990), the genus-specific MPKFI//span>MpKRI primers were used for further amplification (Babu et al., 2007). M. phaseolina ITS sequences in this study shared 100% similarity with the ITS sequences of M. phaseolina from Chickpea (MK757624.1). Genus-specific sequences from this isolate shared 100% homology with other M. phaseolina isolates (MT645816.1 and MN263167.1). As such, M. phaseolina was confirmed to be the pathogen responsible for watermelon charcoal rot in the present report, which resulted in the death of infected watermelons before maturity, causing fruits to lose their commodity value. This report is the first to our knowledge to identify M. phaseolina as a causal pathogen of watermelon charcoal rot in China.


Author(s):  
Mahabeer Singh ◽  
Jitendra Singh ◽  
Shivam Maurya ◽  
Sunil Kumar ◽  
A.K. Meena ◽  
...  

Macrophomina phaseolina (Tassi) Goid. is a soil- and seed-borne pathogen that causes charcoal rot and various rots and blights of more than 500 crop species. Dry root rot (DRR) also called as charcoal rot which causes yield loss ranged from 25-48 per cent. The pathogen is necrotroph and infects a wide range of crops. It is observed that mycelium of M. phaseolina in cotyledons, plumule and radicle, in the naturally infected seeds of mungbean and cowpea. The disease symptoms are clearly visible from the time of emergence and can be evaluated at various stages of development of the plant. The mechanical plugging of the xylem vessels by microsclerotia, toxin production, enzymatic action and mechanical pressure during penetration lead to disease development. Management of M. phaseolina aim to reduce the number of sclerotia in soil or to minimize the contact of the inoculum and the host. Soil solarization can be a cost-effective method for management of soil borne diseases. Disease suppression by biocontrol agents such as Trichoderma harzianum, T. viride and Bacillus subtilis are the sustained manifestation of interactions among the plant, the pathogen, the biocontrol agent, the microbial community on and around the plant and the physical environment and considerably inhibited growth of M. phaseolina. Essential oils and plant extracts contain a multitude of bioactive substances against fungi, bacteria and nematodes. It has been reported that neem oil, turmeric and garlic was effective against M. phaseolina in in vitro condition. Chemical control is an effective method when seed treatment and foliar spray of carbendazim, topsin M-70, captan, thiram, mancozeb, copper oxychloride against root rot and leaf blight (Macrophomina phaseolina) topsin M-70, captan, thiram, mancozeb, copper oxychloride against root rot (Macrophomina phaseolina). As non-chemical alternative methods can be time-consuming and less effective against soilborne plant pathogens. Chemical control is an effective method of controlling some soilborne diseases in agricultural crops. Varoius workers are reported compatibility of biocontrol agents with fungicides and found that Carbendazim and biocontrol agents Trichoderma viride, T. harizianum were found effective under in vitro and pot condition.


Horticulturae ◽  
2021 ◽  
Vol 7 (11) ◽  
pp. 457
Author(s):  
Josefina Viejobueno ◽  
Natalia Rodríguez-Berbel ◽  
Luis Miranda ◽  
Berta de los Santos ◽  
María Camacho

The effect of antagonistic bacteria to control Macrophomina phaseolina was evaluated under in vitro, growth chamber, greenhouse and field conditions. A total of 177 bacteria, isolated from Athrocaulon macrostachyum rhizosphere of the Lebrija marsh, were screened for their potential against M. phaseolina (causes charcoal rot in strawberry) by dual culture assay. Of these isolates, 14 most promising strains were molecularly identified by the 16S rDNA sequencing method using the EzBioCloud database. These strains were tested for in vitro hydrolytic enzymes, HCN production, and biocontrol against M. phaseolina in strawberry plants. All the 14 strains produced, at least, one hydrolytic enzymatic activity and one of them, which belongs to Brevibacterium genus (Hvs8), showed the lowest records of disease incidence (20%) and severity (0.4). With these results, greenhouse and field trials were carried out with the Hvs8 strain, compared to non-treated control. In the greenhouse assays, Hvs8 strain increased root dry mass by 30%, over the control. In the field trials, production and fruit quality were not significantly different between Hvs8 treatment and non-treated control, but plant mortality and plant mortality associated to M. phaseolina decreased by more than 24% and 65% respectively, in Hvs8 treatment. This study suggests that Brevibacterium sp. Hvs8 strain could be a candidate for controlling charcoal rot in strawberry.


Plant Disease ◽  
2021 ◽  
Author(s):  
Roni Cohen ◽  
Meital Elkabez ◽  
Harry Paris ◽  
Amit Gur ◽  
Nir Dai ◽  
...  

Macrophomina phaseolina is a soil-borne fungal pathogen infecting many important crop plants. The fungus, which can survive on crop debris for a long period of time, causes charcoal rot disease by secreting a diverse array of cell-wall degrading enzymes and toxins. M. phaseolina thrives during periods of high temperatures and arid conditions, as typically occuring in Israel and other countries with a Mediterranean climate. Crop losses due to charcoal rot can be expected to increase and spread to other countries in a warming global climate. Management of this pathogen is challenging, requiring an array of approaches for the various crop hosts. Approaches that have had some success in Israel include grafting of melons and watermelons on resistant squash rootstocks and soil application of fungicide to reduce disease incidence in melons, fumigation and alterations in planting date and mulching of strawberries, and alteration in irrigation regime of cotton. Elsewhere, these approaches as well as soil amendments, and addition of organisms that are antagonistic to M. phaseolina have had success in some crop situations. Management through host resistance would be the most sustainable approach, but requires identifying resistant germplasm for each crop and introgressing the resistance into the leading cultivars. Resistance to charcoal rot is under complex genetic control in most crops, posing a great challenge for its introgression into elite germplasm. Moreover, fast, reliable methods of screening for resistance would have to be developed for each crop. The toothpick-inoculation method used by us holds great promise for selecting resistant germplasm for melons and possibly for sesame, but other methodologies have to be devised for each individual crop.


2021 ◽  
Vol 12 ◽  
Author(s):  
Zerka Rashid ◽  
Harleen Kaur ◽  
Veerendra Babu ◽  
Pradeep Kumar Singh ◽  
Sharanappa I. Harlapur ◽  
...  

Charcoal rot is a post-flowering stalk rot (PFSR) disease of maize caused by the fungal pathogen, Macrophomina phaseolina. It is a serious concern for smallholder maize cultivation, due to significant yield loss and plant lodging at harvest, and this disease is expected to surge with climate change effects like drought and high soil temperature. For identification and validation of genomic variants associated with charcoal rot resistance, a genome-wide association study (GWAS) was conducted on CIMMYT Asia association mapping panel comprising 396 tropical-adapted lines, especially to Asian environments. The panel was phenotyped for disease severity across two locations with high disease prevalence in India. A subset of 296,497 high-quality SNPs filtered from genotyping by sequencing was correcting for population structure and kinship matrices for single locus mixed linear model (MLM) of GWAS analysis. A total of 19 SNPs were identified to be associated with charcoal rot resistance with P-value ranging from 5.88 × 10−06 to 4.80 × 10−05. Haplotype regression analysis identified 21 significant haplotypes for the trait with Bonferroni corrected P ≤ 0.05. For validating the associated variants and identifying novel QTLs, QTL mapping was conducted using two F2:3 populations. Two QTLs with overlapping physical intervals, qMSR6 and qFMSR6 on chromosome 6, identified from two different mapping populations and contributed by two different resistant parents, were co-located with the SNPs and haplotypes identified at 103.51 Mb on chromosome 6. Similarly, several SNPs/haplotypes identified on chromosomes 3, 6 and 8 were also found to be physically co-located within QTL intervals detected in one of the two mapping populations. The study also noted that several SNPs/haplotypes for resistance to charcoal rot were located within physical intervals of previously reported QTLs for Gibberella stalk rot resistance, which opens up a new possibility for common disease resistance mechanisms for multiple stalk rots.


Author(s):  
İslim Koşar ◽  
İnci Güler Güney ◽  
Sibel Derviş ◽  
Onur Kırlı ◽  
Göksel Özer

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