Landscape Evolution as a Diversification Driver in Freshwater Fishes

The exceptional concentration of vertebrate diversity in continental freshwaters has been termed the “freshwater fish paradox,” with > 15,000 fish species representing more than 20% of all vertebrate species compressed into tiny fractions of the Earth’s land surface area (<0.5%) or total aquatic habitat volume (<0.001%). This study asks if the fish species richness of the world’s river basins is explainable in terms of river captures using topographic metrics as proxies. The River Capture Hypothesis posits that drainage-network rearrangements have accelerated biotic diversification through their combined effects on dispersal, speciation, and extinction. Yet rates of river capture are poorly constrained at the basin scale worldwide. Here we assess correlations between fish species density (data for 14,953 obligate freshwater fish species) and basin-wide metrics of landscape evolution (data for 3,119 river basins), including: topography (elevation, average relief, slope, drainage area) and climate (average rainfall and air temperature). We assess the results in the context of both static landscapes (e.g., species-area and habitat heterogeneity relationships) and transient landscapes (e.g., river capture, tectonic activity, landscape disequilibrium). We also relax assumptions of functional neutrality of basins (tropical vs. extratropical, tectonically stable vs. active terrains). We found a disproportionate number of freshwater species in large, lowland river basins of tropical South America, Africa, and Southeast Asia, under predictable conditions of large geographic area, tropical climate, low topographic relief, and high habitat volume (i.e., high rainfall rates). However, our results show that these conditions are only necessary, but not fully sufficient, to explain the basins with the highest diversity. Basins with highest diversity are all located on tectonically stable regions, places where river capture is predicted to be most conducive to the formation of high fish species richness over evolutionary timescales. Our results are consistent with predictions of several landscape evolution models, including the River Capture Hypothesis, Mega Capture Hypothesis, and Intermediate Capture Rate Hypothesis, and support conclusions of numerical modeling studies indicating landscape transience as a mechanistic driver of net diversification in riverine and riparian organisms with widespread continental distributions.

River Reorganization Affects Populations of Dwarf Cichlid Species (Apistogramma Genus) in the Lower Negro River, Brazil

Alterations, such as drainage network reorganization, in the landscape in the Amazon basin influence the distribution range and connectivity of aquatic biota and, therefore, their evolution. River capture is a geomorphic mechanism of network reorganization by which a basin captures large portions of the network of a neighboring basin, thus creating a barrier against species dispersal. In this study, the influence of river capture on the genetic differentiation and structuring of two dwarf cichlids species (Apistogramma pertensis and Apistogramma gephyra) is investigated in two tributaries of the lower Negro River. The analysis of 11 loci microsatellite and three mitochondrial DNA genes (Cytochrome b, Citochrome c Oxidase subunit I and 16S ribosomal RNA) confirmed the populational isolation of two dwarf cichlids species, suggesting that they represent evolutionary significant units (ESU) that have been isolated—probably due to the river capture event. The paleovalley that resulted from the river capture is therefore an important physical barrier that separates the populations of the Cuieiras and Tarumã-Mirim Rivers. The findings herein provide evidence of a mechanistic link between the isolation and differentiation of fish populations and the drainage evolution of the Amazon basin, and indicate that the dynamic geological history of the region has promoted species diversification. The process described here partially explains the high diversity in the genus Apistogramma and the information obtained is beneficial to conservation programs.

Using ddRAD-seq phylogeography to test for genetic effects of headwater river capture in suckermouth armored catfish (Loricariidae: Hypostomus) from the central Brazilian Shield

River capture is a geological process of potentially great importance in shaping the genetic diversity, distributions, and community composition of freshwater taxa. Using phylogeographic analyses of ddRAD-seq data from suckermouth armored catfish (Hypostomus sp. 2) populations, we tested for predicted genetic effects of headwater river capture events in central Brazil, previously supported by geological and community ecological data. We analyzed 227 ddRAD tags (3829 SNP loci) across 42 samples. Molecular results strongly supported six Hypostomus genetic clusters/lineages, with the deepest divergence ~1.25 million years ago in the early Pleistocene between a clade from the Upper Paraná and Upper São Francisco river basins versus all other lineages. Consistent with the 'Paraná Capture Hypothesis', several lines of evidence supported mid-Pleistocene colonization and vicariant isolation of Hypostomus populations from an ancestral Upper Paraná population, including: (1) significant phylogeographic structure, with predicted phylogenetic patterns, (2) higher Paraná lineage diversity, (3) ancestral geographic locations reconstructed in the Paraná basin, and (4) non-random interdrainage dispersal and vicariance events, indicating river captures primarily into the Tocantins and Upper São Francisco basins c. ~220,000-145,500 years ago. Phylogeographic inference was complicated by lack of lineage monophyly across loci and lineages distributed in multiple basins, the latter of which lent support to the non-mutually exclusive 'Frequent Interdrainage Dispersal Hypothesis'. However, species tree and demographic modeling results suggested these were artefacts of incomplete sorting of alleles in large ancestral populations over a geologically recent timeframe of divergence. Qualitative and quantitative sensitivity analyses demonstrated that our downstream genetic results were robust to effects of varying ddRAD-seq assembly parameters, which heavily influenced the number of output loci. We predict that codistributed freshwater taxa in Central Brazil may not exhibit phylogeographic patterns similar to Hypostomus sp. 2 due to complex patterns of superimposed river capture events, or if smaller ancestral population sizes have allowed more complete lineage sorting in other taxa.

Formation Mechanism for Upland Low-Relief Surface Landscapes in the Three Gorges Region, China

Extensive areas with low-relief surfaces that are almost flat surfaces high in the mountain ranges constitute the dominant geomorphic feature of the Three Gorges area. However, their origin remains a matter of debate, and has been interpreted previously as the result of fluvial erosion after peneplain uplift. Here, a new formation mechanism for these low-relief surface landscapes has been proposed, based on the analyses of low-relief surface distribution, swath profiles, χ mapping, river capture landform characteristics, and a numerical analytical model. The results showed that the low-relief surfaces in the Three Gorges area could be divided into higher elevation and lower elevation surfaces, distributed mainly in the highlands between the Yangtze River and Qingjiang River. The analyses also showed that the rivers on both sides of the drainage divide have not yet reached equilibrium, with actively migrating drainage divides and river basins in the process of reorganizing. It was concluded that the low-relief surfaces in the Three Gorges area did not share a common uplift history, and neither were they peneplain relicts, but rather that the effect of “area-loss feedback” caused by river capture has promoted the formation of upland low-relief surface landscapes. A future work aims to present the contribution of accurate dating of low-relief surface landscapes.

How River Capture Affects the Evolution of Aquatic Organisms

River basins are dynamic environments that are always changing and reorganizing under geologic forces. New research investigates how this shape shifting influences aquatic speciation and extinction.

River capture or ancestral polymorphism: an empirical genetic test in a freshwater fish using approximate Bayesian computation

A headwater or river capture is a phenomenon commonly invoked to explain the absence of reciprocal monophyly of genetic lineages among isolated hydrographic basins in freshwater fish. Under the assumption of river capture, a secondary contact between populations previously isolated in different basins explains the observed genetic pattern. However, the absence of reciprocal monophyly could also arise under population isolation through the retention of ancestral of polymorphisms. Here, we applied an approximate Bayesian computation (ABC) framework for estimating the relative probability of scenarios with and without secondary contact. We used Cnesterodon decemmaculatus as a study model because of the multiple possible cases of river capture and the demographic parameters estimated in a previous mitochondrial DNA study that are useful for simulating scenarios to test both hypotheses using the ABC framework. Our results showed that, in general, mitochondrial DNA is useful for distinguishing between these alternative demographic scenarios with reasonable confidence, but in extreme cases (e.g. recent divergence or large population size) there is no power to discriminate between scenarios. Testing hypotheses of drainage rearrangement under a statistically rigorous framework is fundamental for understanding the evolution of freshwater fish fauna as a complement to, or in the absence of, geological evidence.

Stacked megafans of the Kalahari Basin as archives of paleogeography, river capture, and Cenozoic paleoclimate of southwestern Africa

ABSTRACT The Cenozoic Kalahari Basin covers large parts of southern Africa. A continuous 400 m core was obtained in northern Namibia and analyzed in detail. Here, we present sedimentological, geochemical, mineralogical, granulometric, and hydraulic data, which were used to derive the sedimentation history and the Cenozoic paleoclimate and paleogeography of SW Africa. The first absolute ages for the Kalahari Basin were obtained by dating of calcretes, which showed that the core covers almost the entire Cenozoic. Two megafans could be distinguished. The older, buried Olukonda Megafan stems from a mafic source rock, potentially the Kunene Intrusive Complex, and was deposited by a paleo–Kunene River towards the southeast and east, under a semiarid climate. The younger Cubango Megafan (Andoni Formation) has a completely different provenance, namely felsic metamorphic and granitoid rocks, transported from the north by the Cubango River. The capture of the Kunene towards the Atlantic during the Eocene resulted in this change in provenance. Despite the distinct differences between the formations, the temporal hiatus between them must have been short. The results are a showcase of the potential of megafans for hosting major deep freshwater aquifers.

Ancient Rivers and Critical Minerals in Eastern Alaska

Fieldwork is revealing a history of landscape evolution over the past 5 million years that links climate change and river capture to critical mineral resources across the Alaska-Yukon border.