clinical exome sequencing
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(FIVE YEARS 5)

2021 ◽  
Author(s):  
Manna Jose ◽  
Prashant Poulose ◽  
Soumya Sundaram ◽  
Ashalatha Radhakrishnan ◽  
Sheela Nampoothiri ◽  
...  

Author(s):  
Jyotindra Narayan Goswami ◽  
Shijith K.P ◽  
Ashish Kumar Simalti ◽  
Saroj Kumar Patnaik

AbstractA 3.5-year-old male child patient with mild developmental delay presented with history of acute onset fever, encephalopathy, and dyskinesia. The patient was investigated for common etiologies and was managed supportively. His neuroimaging was suggestive of vanishing white matter (VWM) disease which was confirmed by clinical exome sequencing. The child had an eventful hospital stay followed by near-total recovery after 4 weeks. The case attempts to sensitize readers about the current perspectives pertaining to VWM disease.


2021 ◽  
pp. 1-11
Author(s):  
Montse Pauta ◽  
Berta Campos ◽  
Maria Segura-Puimedon ◽  
Gemma Arca ◽  
Alfons Nadal ◽  
...  

<b><i>Objective:</i></b> The aim of the study was to assess the diagnostic yield of 2 different next-generation sequencing (NGS) approaches: gene panel and “solo” clinical exome sequencing (solo-CES), in fetuses with structural anomalies and normal chromosomal microarray analysis (CMA), in the absence of a known familial mutation. <b><i>Methodology:</i></b> Gene panels encompassing from 2 to 140 genes, were applied mainly in persistent nuchal fold/fetal hydrops and in large hyperechogenic kidneys. Solo-CES, which entails sequencing the fetus alone and only interpreting the Online Mendelian Inheritance in Man genes, was performed in multisystem or recurrent structural anomalies. <b><i>Results:</i></b> During the study period (2015–2020), 153 NGS studies were performed in 148 structurally abnormal fetuses with a normal CMA. The overall diagnostic yield accounted for 35% (53/153) of samples and 36% (53/148) of the fetuses. Diagnostic yield with the gene panels was 31% (15/49), similar to 37% (38/104) in solo-CES. <b><i>Conclusions:</i></b> A monogenic disease was established as the underlying cause in 35% of selected fetal structural anomalies by gene panels and solo-CES.


Author(s):  
Martina Marangoni ◽  
Guillaume Smits ◽  
Gilles Ceysens ◽  
Elena Costa ◽  
Robert Coulon ◽  
...  

2021 ◽  
Author(s):  
Sneha Arya ◽  
Sandeep Kumar ◽  
Anurag R Lila ◽  
Vijaya Sarathi ◽  
Saba Samad Memon ◽  
...  

Objective: The literature regarding gonadoblastoma risk in exonic WT1 pathogenic variants is sparse. We aim to describe the phenotypic and genotypic characteristics of Asian-Indian patients with WT1 pathogenic variants and systematically review the literature on association of exonic WT1 pathogenic variants and gonadoblastoma. Design: Combined retrospective-prospective analysis Methods: 46,XY DSD patients with WT1 pathogenic variants detected by clinical exome sequencing from a cohort of 150 index patients and their affected relatives were included. The PubMed database was searched for the literature on gonadoblastoma with exonic WT1 pathogenic variants. Results: The prevalence of WT1 pathogenic variants among 46,XY DSD index patients was 2.7% (4/150). All the four patients had atypical genitalia and cryptorchidism. None of them had Wilms' tumor till the last follow-up, whereas one patient had late-onset nephropathy. 11p13 deletion was present in one patient with aniridia. The family with p.Arg458Gln pathogenic variant had varied phenotypic spectrum of Frasier syndrome; two siblings had gonadoblastoma, one of them had growing teratoma syndrome (first report with WT1). On literature review, of >100 exonic point pathogenic variants, only eight variants (p.Arg462Trp, p.Tyr177*, p.Arg434His, p.Met410Arg, p.Gln142*, p.Glu437Lys, p.Arg458* and p.Arg458Gln) in WT1 were associated with gonadoblastoma in a total of 15 cases (including our two cases). Conclusions: WT1 alterations account for 3% of 46,XY DSD patients in our cohort. 46,XY DSD patients harboring exonic WT1 pathogenic variants carry a small but definitive risk of gonadoblastoma; hence, these patients require a gonadoblastoma surveillance with a more stringent surveillance in those harboring a gonadoblastoma-associated variant.


2021 ◽  
Vol 4 ◽  
pp. 1-15
Author(s):  
Shannon M. McNulty ◽  
Yasemin Cole ◽  
Bradford C. Powell ◽  
Stefan Rentas

2021 ◽  
Vol 58 (S1) ◽  
pp. 164-164
Author(s):  
S.T. Vo ◽  
T.T. Le ◽  
C.X. Nguyen ◽  
H.X. Tang ◽  
H.T. Nguyen ◽  
...  

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