genetic potential
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Author(s):  
Sara Morselli ◽  
Valeria Gaspari ◽  
Alessia Cantiani ◽  
Melissa Salvo ◽  
Claudio Foschi ◽  
...  

We assessed the characteristics of Neisseria meningitidis pharyngeal carriage in a cohort of ‘men having sex with men’, including patients with pharyngeal Neisseria gonorrhoeae infection. In the period 2017-2019, among all the oropharyngeal samples tested for gonorrhoea from MSM attending a STI Clinic in Bologna (Italy), we randomly selected 244 N. gonorrhoeae-positive samples and 403 negatives (n=647). Pharyngeal specimens were tested for N. meningitidis presence, by the detection of sodC gene. N. meningitidis-positive samples were further grouped by PCR tests for the major invasive genogroups (i.e., A, B, C, W, and Y). A molecular assay, targeting capsule transporter gene, was used to determine meningococcal capsular status. Overall, 75.8% (491/647) of samples tested positive for sodC gene, indicating a pharyngeal meningococcal carriage. Meningococcal colonisation was significantly more frequent in younger subjects (P=0.009), with no association with HIV infection. Non-groupable meningococci represented most of pharyngeal carriages (about 71%). The commonest N. meningitidis serogroup was B (23.6%), followed by C (2.1%), Y (1.8%) and W (1.1%). Meningococci were often characterized by the genetic potential of capsule production. Interestingly, a negative association between N. meningitidis and N. gonorrhoeae was found: pharyngeal gonorrhoea was significantly more present in patients without meningococcal carriage (P=0.03). Although preliminary, our data added knowledge on the epidemiology of meningococcal carriage in MSM communities at high risk of gonococcal infections, gaining new insights into the interactions/dynamics between N. meningitidis and N. gonorrhoeae.


Author(s):  
Douglas Villalta ◽  
Jose Bernardo Quintos

Abstract Gonadotropin releasing hormone analogs (GnRHas) are an effective treatment to address the compromise in height potential seen in patients with central precocious puberty. There is no evidence in the literature of a single GnRHa used for longer than 2 years before being removed or replaced. We describe a patient who was on continuous gonadotropin suppression for 7 years and despite this, achieved a height potential within one standard deviation of mid-parental height. A boy aged 10 years and 3 months presented to endocrine clinic with signs of precocious puberty and advanced bone age. Initial labs showed random LH 9.4 mIU/mL, FSH 16.3 mIU/mL, DHEAS 127 mcg/dl, and testosterone 628 ng/dL. He was initially started on Lupron injections before transitioning to a Histrelin implant. Follow-up laboratory results 5 months post-suppression showed pre-pubertal random LH 0.2 mIU/mL, FSH 0.1 mIU/mL, and testosterone 5 ng/dL. The patient was lost to follow-up and returned 5 years later presenting with gynecomastia and delayed bone age. He had continuous gonadotropin suppression with random LH 0.10 mIU/mL, FSH 0.16 mIU/mL, and testosterone 8 ng/dL. The Histrelin implant was removed and 4 months after removal labs showed random pubertal hormone levels with LH 5.6 mIU/mL, FSH 4.3 mIU/mL, and testosterone 506 ng/dl. The patient’s mid-parental height was 175.3 cm and the patient’s near final height was 170.6 cm which is within one standard deviation of his genetic potential. Further studies are needed to explore continuous gonadotropin hormone suppression with a single Histrelin implant beyond 2 years.


2022 ◽  
Vol 23 (2) ◽  
pp. 651
Author(s):  
Muhammad Furqan Ashraf ◽  
Dan Hou ◽  
Quaid Hussain ◽  
Muhammad Imran ◽  
Jialong Pei ◽  
...  

Crop production is a serious challenge to provide food for the 10 billion individuals forecasted to live across the globe in 2050. The scientists’ emphasize establishing an equilibrium among diversity and quality of crops by enhancing yield to fulfill the increasing demand for food supply sustainably. The exploitation of genetic resources using genomics and metabolomics strategies can help generate resilient plants against stressors in the future. The innovation of the next-generation sequencing (NGS) strategies laid the foundation to unveil various plants’ genetic potential and help us to understand the domestication process to unmask the genetic potential among wild-type plants to utilize for crop improvement. Nowadays, NGS is generating massive genomic resources using wild-type and domesticated plants grown under normal and harsh environments to explore the stress regulatory factors and determine the key metabolites. Improved food nutritional value is also the key to eradicating malnutrition problems around the globe, which could be attained by employing the knowledge gained through NGS and metabolomics to achieve suitability in crop yield. Advanced technologies can further enhance our understanding in defining the strategy to obtain a specific phenotype of a crop. Integration among bioinformatic tools and molecular techniques, such as marker-assisted, QTLs mapping, creation of reference genome, de novo genome assembly, pan- and/or super-pan-genomes, etc., will boost breeding programs. The current article provides sequential progress in NGS technologies, a broad application of NGS, enhancement of genetic manipulation resources, and understanding the crop response to stress by producing plant metabolites. The NGS and metabolomics utilization in generating stress-tolerant plants/crops without deteriorating a natural ecosystem is considered a sustainable way to improve agriculture production. This highlighted knowledge also provides useful research that explores the suitable resources for agriculture sustainability.


Author(s):  
G. Brizgalov ◽  
L. Ignatovich

Purpose: Assessment of the current state of breeding and tribal work in northern reindeer herding.Due to the specifics of the content and incomplete dignification, breeding and tribal work in reindeer herding differs from other branches of animal husbandry. In the extreme natural conditions of the area, the interaction of the "genotype environment" has a significant impact on the realization of the genetic potential of the individual. The main selection feature of deer, determining all types of productivity - a living mass, an extremely variable phenotypic parameter, fluctuating in different years, by seasons of the year, by farms, which reduces the accuracy of the assessment of population-genetic parameters. In comparison with other pets, the role of natural selection in the microevolution of the reindeer is more substantial. The breeds of reindems relate to the aboriginal and so far do not have ingenust structures included in the state register of breeding achievements admitted to use. Methods for conducting reindeer tests for distinctness, homogeneity and stability, approved by the Government of the Silvering 24.11.2015, for No. 26-12-06, allows you to identify new types and raise breeding and tribal work in reindeer breeding to a higher level. Its main directions are the study, preservation and management of reindeer genetic resources in order to improve existing and creating new competitive types using high-performance genotyping technologies, accurate phenotyping, bio-information and digital technologies.Creation of methodological platforms and development of technologies that contribute to an increase in the implementation of the genetic potential of breeding forms of animals with improved parameters of economic and useful signs. Development of technologies for a lifetime management of meat quality to obtain high quality and safe food. Formation of a new paradigm of the selection process of creating highly productive forms, characterized by high quality indicators. Transformation of the paradigm "reindeer herding" in the conditions of a digital economy and global changes.


HortScience ◽  
2022 ◽  
Vol 57 (1) ◽  
pp. 65-71
Author(s):  
Craig E. Kallsen ◽  
Dan E. Parfitt

Excessive boron (B) in soil and water is a problem for pistachio (Pistacia vera L.) production in the San Joaquin Valley (SJV) of California. Although amenable, leaching of B requires more water than chlorine (Cl) or sodium (Na) and is increasingly difficult as B in irrigation water increases. The lack of subsurface drainage to the ocean increases soil salinity in many growing areas, especially on the west side of the SJV where B is often excessive natively in the soil and water. Pistachio rootstocks that can tolerate or exclude B may be a partial solution. For the past decade in California, the dominant rootstock has been seedlings and clonal selections of University of California Berkeley 1 (UCB-1), which is a hybrid of P. atlantica × P. integerrima. This reliance on a genetically similar pool of rootstocks has constrained Pistacia’s genetic potential for adapting to high-salt environments. This study compared scion and rootstock leaflet B concentration of novel hybrid experimental rootstocks with variable percentages of P. vera and P. integerrima heritage with UCB-1. Rootstocks with P. vera heritage limited B in both rootstock and scion leaflets compared with UCB-1. In six trials conducted over several years, leaflet B in ungrafted hybrid rootstocks having 62.5% to 75% P. vera and 25% to 37.5% P. integerrima heritage had 27.6% to 43.1% lower B leaflet concentration than did UCB-1. Depending on the experiment and year, grafted rootstocks having 37.5% P. vera and 62.5% P. integerrima heritage had 46.8% to 70.8% lower B scion leaflet concentration than did UCB-1. Genetic variation in B uptake in Pistacia species and interspecific hybrids, and among individual seedlings within populations, allows the breeding of pistachio rootstocks more tolerant of excess B.


2022 ◽  
Vol 82 ◽  
Author(s):  
S. Bostanova ◽  
D. Aitmukhanbetov ◽  
K. Bayazitova ◽  
D. Zhantleuov ◽  
Y. Il

Abstract This article presents the results of the level of feeding and the health status of dairy cows in a commercial dairy farm on the content of the main components in milk (fat, protein, urea). The aim of the research was to study the milk productivity and composition of milk of cows, to analyze the level of feeding and the content of basic nutrients in the diet of the farm. The farm breeds purebred Holstein cattle with a high genetic potential for productivity. The milking herd was formed in 2009 on the basis of 600 heads of Holstein-Friesian heifers imported from Hungary, as well as 65 heads of Holsteinized heifers of Ukrainian selection from Ukraine in 2015. Today the livestock numbers about 1,500 head of cattle, of which there are about 900 breeders. On the territory of the farm there are: 3 cowsheds for keeping cows, an insemination room, a milking parlor with a parallel installation of the Delaval company, in which 48 cows are milked for one milking, the ABK, where the manager's office, livestock technician, accounting is located, and a mini-hotel with dining room and lounges. Dairy bases are equipped with auto-drinkers, ventilation, plumbing, electric lighting, manure removal mechanisms, and a milking installation. The object of the research was Holstein cows in the amount of 483 heads of Aina Dairy Farm LLP. The studies were carried out according to generally accepted zootechnical methods using modern equipment for conducting analyzes and interstate and state standards. The research results showed that the milk productivity of cows averaged 19.5 kg per day, the fat content 4.3%, the protein 3.9%, the number of somatic cells 230.5 thousand units / ml, urea 45.3 mg / 100 ml respectively. Analyzing the level of urea in milk can suggest a high crude protein content in the diet. The ration of feeding dairy cows on the farm is concentrate-silage-haylage and there is an excess of dry matter by 16.2%, crude protein by 9.8%, starch by 29.4%, respectively.


Author(s):  
Priyadarsini Sanghamitra ◽  
Lotan Kumar Bose ◽  
Torit Baran Bagchi ◽  
Awadhesh Kumar ◽  
Pritesh Sundar Roy ◽  
...  
Keyword(s):  

Author(s):  
V.V. Voloshina ◽  
V.I. Gomenyuk

Gene pool of apple trees of the Experimental Station of Pomology named after L. P. Symyrenko IS of NAAS of Ukraine is supported in the “field gene bank” and has more than 1260 samples. The main task that gene banks solve is to preserve the genetic diversity of plants for present and future generations of people. As a result of attracting new samples to the collection and studying the imported introduced material, the selected sources of economically valuable traits are transferred for further inclusion in the selection programs of other research institutions. The genetic potential of apple productivity and resistance to biotic and abiotic environmental factors is far from exhausted.


2021 ◽  
Vol 10 (1) ◽  
pp. 60
Author(s):  
Stéven Yvenou ◽  
Maxime Allioux ◽  
Alexander Slobodkin ◽  
Galina Slobodkina ◽  
Mohamed Jebbar ◽  
...  

The biochemical pathways of anaerobic sulfur disproportionation are only partially deciphered, and the mechanisms involved in the first step of S0-disproportionation remain unknown. Here, we present the results of sequencing and analysis of the complete genome of Dissulfurimicrobium hydrothermale strain Sh68T, one of two strains isolated to date known to grow exclusively by anaerobic disproportionation of inorganic sulfur compounds. Dissulfurimicrobium hydrothermale Sh68T is a motile, thermophilic, anaerobic, chemolithoautotrophic microorganism isolated from a hydrothermal pond at Uzon caldera, Kamchatka, Russia. It is able to produce energy and grow by disproportionation of elemental sulfur, sulfite and thiosulfate. Its genome consists of a circular chromosome of 2,025,450 base pairs, has a G + C content of 49.66% and a completion of 97.6%. Genomic data suggest that CO2 assimilation is carried out by the Wood–Ljungdhal pathway and that central anabolism involves the gluconeogenesis pathway. The genome of strain Sh68T encodes the complete gene set of the dissimilatory sulfate reduction pathway, some of which are likely to be involved in sulfur disproportionation. A short sequence protein of unknown function present in the genome of strain Sh68T is conserved in the genomes of a large panel of other S0-disproportionating bacteria and was absent from the genomes of microorganisms incapable of elemental sulfur disproportionation. We propose that this protein may be involved in the first step of elemental sulfur disproportionation, as S0 is poorly soluble and unable to cross the cytoplasmic membrane in this form.


2021 ◽  
Author(s):  
Catja Selga ◽  
Pawel Chrominski ◽  
Ulrika Carlson-Nilsson ◽  
Mariette Andersson ◽  
Aakash Chawade ◽  
...  

Abstract The genetic diversity and population structure of breeding germplasm is central knowledge for crop improvement. To gain insight into the genetic potential of the germplasm used for potato breeding in a Nordic breeding program as well as the collections from the Nordic genebank (NordGen), 133 potato genotypes were genotyped using the Infinium Illumina 20K SNP array. After SNP filtering, 11 610 polymorphic SNPs were included in the analysis. In addition, data from three important breeding traits – percent dry matter and uniformity of tuber shape and eye – were scored to measure the variation be-tween groups. The genetic diversity among the genotypes was estimated using principal coordinate analysis based on the genetic distance between individuals, as well as by using the software STRUC-TURE. Both methods suggest that the collected breeding material and the germplasm from the gene-bank are closely related, with a low degree of population structure between the groups. The phenotypic distribution among the genotypes revealed significant differences, especially between farmer’s cultivars and released cultivars and breeding clones. The percent heterozygosity was similar between the groups, with a mean average of 58–60%. Overall, the breeding germplasm and the collection of genotypes from the Nordic gene bank seems to be closely related with similar genetic background. This gains insight that the genetic potential of available Nordic potato breeding germplasm is low, and for genetic hybridi-zation purposes, genotypes from outside the Nordic region should be employed.


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