Genetic identification of farmed and wild Atlantic cod, Gadus morhua, in coastal Norway

Glover, K. A., Dahle, G., and Jørstad, K. E. 2011. Genetic identification of farmed and wild Atlantic cod, Gadus morhua, in coastal Norway. – ICES Journal of Marine Science, 68: 901–910. Each year thousands of Atlantic cod escape from Norwegian fish farms. To investigate the potential for the genetic identification of farmed–escaped cod in the wild, three case studies were examined. Samples of farmed, recaptured farmed escapees, and wild cod were screened for ten microsatellite loci and the Pan I locus. Variable genetic differences were observed among cod sampled from different farms and cages (pairwise FST = 0.0–0.1), and in two of the case studies, the most likely farm(s) of origin for most of the recaptured escapees were identified. In case study 2, wild cod were genetically distinct from both farmed fish (pairwise FST = 0.026–0.06) and recaptured farmed–escaped cod (pairwise FST = 0.029 and 0.039), demonstrating the potential to detect genetic interactions in that fjord. Genetic identification of escapees was more challenging in case study 3, and some morphologically characterized wild cod were found to most likely represent farmed escapees. It is concluded that where cod are farmed in the same region as their own parents/grandparents were initially sourced, or where farmed escapees originate from multiple sources, quantifying genetic interactions with wild populations will be challenging with neutral or nearly neutral markers such as microsatellites.

Reproductive interactions between fugitive farmed and wild Atlantic cod (Gadus morhua) in the field

Atlantic cod ( Gadus morhua ) are being increasingly farmed in net pens adjacent to coastal populations that are currently at historic lows. One concern is that farmed escapees enter local spawning shoals and mate with wild cod. We tested for the potential of escaped farmed cod to interact and hybridize with wild fish by examining the spatial dynamics of, and associations between, fish tagged with ultrasonic transmitters. Based on these data, we also investigated the basic mating system of cod in the field. The spawning ground was best described as a lekking arena. Wild males aggregated near the seafloor and associations between individuals were frequent. Wild females had a pelagic and dispersed distribution and rarely associated with each other. Associations between individual wild males and females were also infrequent. Farmed males rarely associated with wild fish and had core usage areas above the wild males, suggesting that they were not admitted into the spawning arena. Farmed females were over the spawning arena more frequently than wild females and often associated with wild males at the depth of the spawning arena, indicating potential mating with wild males and the possibility of courtship interference. Hence, hybridization between escaped farmed and wild cod is likely.

The expression of secondary sexual characteristics in recruit- and repeat-spawning farmed and wild Atlantic cod (Gadus morhua)

Skjæraasen, J. E., Meager, J. J., and Karlsen, Ø. 2008. The expression of secondary sexual characteristics in recruit- and repeat-spawning farmed and wild Atlantic cod (Gadus morhua). – ICES Journal of Marine Science, 65: 1710–1716. We examined the expression of the two known secondary sexual characteristics of Atlantic cod, the pelvic fin and the drumming muscle, in farmed and wild cod stemming from the same population. Farmed and wild males had longer pelvic fins and larger drumming muscles than females, but wild cod had longer fins than farmed cod. The size of the drumming muscle of males was similar among wild and farmed cod, but farmed females had smaller muscles than their wild counterparts. Repeat-spawning wild males tended to invest less in drumming-muscle mass and more in pelvic-fin growth than recruit-spawning fish, whereas the reverse was true for farmed males. Males use pelvic fins to embrace females during ventral mounts, a key mating behaviour, and display them to other males during agonistic interactions. The drumming muscle is used by males to produce sound during courtship and aggressive displays, whereas females only use sound outside the spawning season, for agonistic and defensive behaviours that are unlikely to be as important in the farming environment. The results are discussed in the context of the reproductive success of farmed escapees in the wild.