Adaptations and plastic phenotypic responses of marine animals to the environmental challenges of the high intertidal zone

The high intertidal zone is home to an incredible variety of marine animals, as it offers an escape from low intertidal/subtidal predation and competition, among other advantages. However, this area of the shore also comes with many tide-driven and emersion-associated environmental stressors, such as desiccation, high temperatures and freezing stress, hypoxia, salinity fluctuations, nitrogenous waste accumulation, ultraviolet (UV) radiation, wave and ice disturbance, and hydrogen sulphide (H2S) toxicity. This review explores the diversity of evolutionary adaptations and plastic phenotypic responses that high intertidal animals use to cope with these challenges. Examples are provided of behavioural, morphological, physiological and biochemical adaptations/responses, along with some of the underlying molecular mechanisms that have been elucidated to date. Adaptations of many different worms, anemones, molluscs, crustaceans and fishes are highlighted. Many adaptations and mechanisms of plasticity are universal among animal phyla, and some are multifunctional (serve more than one function) or provide tolerance to multiple stressors (i.e., ‘cross-tolerance’). High intertidal animals have received considerable attention by scientists, given their accessibility and that they can provide valuable insights in the transition from a marine to a terrestrial lifestyle. Nevertheless, further research is needed to understand the adaptations/responses of these animals more thoroughly, and the future holds great promise for accomplishing this with recent advances in epigenetics, transcriptomics, protein biochemistry and other molecular tools.

Plasticity across levels: relating epigenomic, transcriptomic, and phenotypic responses to osmotic stress in a halotolerant microalga

Phenotypic plasticity, the ability of a given genotype to produce alternative phenotypes in response to its environment of development, is an important mechanism for coping with variable environments. While the mechanisms underlying phenotypic plasticity are diverse, their relative contributions need to be investigated quantitatively to better understand the evolvability of plasticity across biological levels. This requires relating plastic responses of the epigenome, transcriptome, and organismal phenotype, and how they vary with the genotype. Here we carried out this approach for responses to osmotic stress in Dunaliella salina, a green microalga that is a model organism for salinity tolerance. We compared two strains that show markedly different demographic responses to osmotic stress, and showed that these phenotypic responses involve strain- and environment-specific variation in gene expression levels, but a relative low - but significant - effect of strain x environment interaction. We also found an important genotype effect on the genome-wide methylation pattern, but little contribution from environmental conditions to the latter. However, we did detect a significant marginal effect of epigenetic variation on gene expression, beyond the influence of genetic differences on epigenetic state, and we showed that hypomethylated regions are correlated with higher gene expression. Our results indicate that epigenetic mechanisms are either not involved in the rapid plastic response to environmental change in this species, or involve only few changes in trans that are sufficient to trigger concerted changes in the expression of many genes, and phenotypic responses by multiple traits.

Structure-Activity Relationship and Bioactivity Studies of Neurotrophic trans-Banglene

Neurotrophic small molecule natural products are functional analogs of signaling proteins called neurotrophins, which cause a pro-growth, pro-survival, or pro-differentiation response in neuronal cells. While these phenotypic responses are desirable to combat neurodegenerative disease progression, the pharmacokinetic properties of neurotrophins present challenges to their administration. Therefore, neurotrophic small molecules such as the cis- and trans-banglenes offer attractive alternatives. We describe the synthesis and testing of banglene derivatives and establish a structure-activity response for the banglene family. We demonstrate that (–) trans-banglene is the primarily active enantiomer, and that select modifications on the cyclohexene ring of trans-banglene do not significantly impair its bioactivity. Finally, we demonstrate that (–) trans-banglene potentiation of NGF induced neuritogenesis is unaffected by the presence of these Erk1/2, Akt and Pkc inhibitors. Our structure-activity results also suggest that (–) trans-banglene neurotrophic activity and its potentiation of NGF activity might be distinct unassociated processes.

Structure-Activity-Relationship and Bioactivity of Neurotrophic trans-Banglene

Neurotrophic small molecule natural products are functional analogs of signaling proteins called neurotrophins, which cause a pro-growth, pro-survival, or pro-differentiation response in neuronal cells. While these phenotypic responses are desirable to combat neurodegenerative disease progression, the pharmacokinetic properties of neurotrophins present challenges to their administration. Therefore, neurotrophic small molecules such as the cis- and trans-banglenes offer attractive alternatives. We describe the synthesis and testing of banglene derivatives and establish a structure-activity response for the banglene family. We demonstrate that (–) trans-banglene is the primarily active enantiomer, and that select modifications on the cyclohexene ring of trans-banglene do not significantly impair its bioactivity. Finally, we demonstrate that (–) trans-banglene potentiation of NGF induced neuritogenesis is unaffected by the presence of these Erk1/2, Akt and Pkc inhibitors. Our structure-activity results also suggest that (–) trans-banglene neurotrophic activity and its potentiation of NGF activity might be distinct unassociated processes.

Genetic mapping of genotype-by-ploidy effects in Arabidopsis thaliana

Plants can express different phenotypic responses following polyploidization, but ploidy-dependent phenotypic variation has so far not been assigned to specific genetic factors. To map such effects, segregating populations at different ploidy levels are required. The availability of an efficient haploid-inducer line in Arabidopsis thaliana allows for the rapid development of large populations of segregating haploid offspring. Because Arabidopsis haploids can be self-fertilised to give rise to homozygous doubled haploids, the same genotypes can be phenotyped at both the haploid and diploid ploidy level. Here, we compared the phenotypes of recombinant haploid and diploid offspring derived from a cross between two late flowering accessions to map genotype x ploidy (GxP) interactions. Ploidy-specific quantitative trait loci (QTLs) were detected at both ploidy levels. This implies that mapping power will increase when phenotypic measurements of monoploids are included in QTL analyses. A multi-trait analysis further revealed pleiotropic effects for a number of the ploidy specific QTLs as well as opposite effects at different ploidy levels for general QTLs. Taken together, we provide evidence of genetic variation between different Arabidopsis accessions being causal for dissimilarities in phenotypic responses to altered ploidy levels, revealing a GxP effect. Additionally, by investigating a population derived from late flowering accessions we revealed a major vernalisation specific QTL for variation in flowering time, countering the historical bias of research in early flowering accessions.

Dormant plasticity of rotifer diapausing eggs in response to predator kairomones

In freshwater ecosystems, hatching strategy of diapausing eggs (DEs) under predation risk has important ecological implication for zooplankters. Although kairomones released by predators can induce phenotypic responses of prey, hatching patterns of DEs in response to kairomones have received contradictory conclusions in zooplankters. Maternal environment may also affect hatching strategy of DEs during predator–prey interactions. We used classical Brachionus calyciflorus – Asplanchna models to determine the timing and proportion of DE hatching in association with parental and embryonic exposure to kairomones. Results obtained from two Brachionus clones supported the hypothesis that DEs could detect Asplanchna kairomones and adjust hatching patterns. DEs showed early and synchronous hatching patterns in the environment with kairomones. Data also supported the prediction that DEs could gain information about predators from maternal environments and adjusted their hatching pattern in response to the presence of kairomones. Compared with DEs from Brachionus mothers not exposed to kairomones, DEs produced by mothers that were experienced with kairomones attained a higher hatching rate when both of them hatched in the environment either with or without kairomones. Our results suggest that DEs of B . calyciflorus possess dormant plasticity to defend against predation from Asplanchna , which may be regulated by maternal environmental effects during sexual life cycles.

Effects of Superhydrophobic Sand Mulching on Evapotranspiration and Phenotypic Responses in Tomatoes (Solanum lycopersicum) under Normal and Reduced Irrigation

Irrigated agriculture in arid and semi-arid regions is a vital contributor to the global food supply; however, these regions endure massive evaporative losses that are compensated by unsustainable freshwater withdrawals. Plastic mulches have been used to curtail evaporation, improve water-use efficiency, and ensure food and water security, but they are non-biodegradable and their disposal is unsustainable. We recently developed superhydrophobic sand (SHS), which comprises sand grains with a nanoscale wax coating that could offer a more sustainable mulching solution. Here, the effects of adding a 1.0 cm-thick layer of SHS mulch on the evapotranspiration and phenotypic responses of tomato (Solanum lycopersicum) plants are studied under normal and reduced irrigation. Under both irrigation regimes, SHS mulching suppressed evaporation and enhanced transpiration by 78% and 17%, respectively relative to the bare soil. Overall, SHS mulching enhanced root xylem vessel diameter, stomatal aperture, stomatal conductance, and chlorophyll content index by 21%, 25%, 28%, and 23%, respectively. Total fruit yields, total dry mass, and harvest index increased in SHS-mulched plants by 33%, 20%, and 16%, respectively than in bare soil. These findings demonstrate the potential of SHS to boost irrigation efficiency in water-limited environments and provide mechanistic insights behind yield enhancement by SHS mulching.