Phylogenetic Analysis of Bacterial Communities Associated with Leaves of the Seagrass Halophila stipulacea by a Culture-Independent Small-Subunit rRNA Gene Approach

2000 ◽  
Vol 39 (1) ◽  
pp. 22-31 ◽  
Author(s):  
S. Weidner ◽  
W. Arnold ◽  
E. Stackebrandt ◽  
A. Pühler
Keyword(s):  
Phylogenetic Analysis ◽  
Bacterial Communities ◽  
Small Subunit ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Halophila Stipulacea ◽  
Small Subunit Rrna Gene ◽  
Culture Independent

Phylogenetic analysis of Blastocystis isolates from different hosts based on the comparison of small-subunit rRNA gene sequences

2003 ◽  
Vol 126 (1) ◽  
pp. 119-123 ◽  
Author(s):  
Christophe Noël ◽  
Corinne Peyronnet ◽  
Delphine Gerbod ◽  
Virginia P Edgcomb ◽  
Pilar Delgado-Viscogliosi ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Small Subunit ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Gene Sequences ◽  
Small Subunit Rrna Gene

Sequence of a small subunit rRNA gene of Schistosoma mansoni and its use in phylogenetic analysis

1991 ◽  
Vol 46 (2) ◽  
pp. 201-208 ◽  
Author(s):  
Pirlanta Omer Ali ◽  
Andrew J.G. Simpson ◽  
Raymond Allen ◽  
Andy P. Waters ◽  
Christopher J. Humphries ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Schistosoma Mansoni ◽  
Small Subunit ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Small Subunit Rrna Gene

Phylogenetic analysis of ten black yeast species using nuclear small subunit rRNA gene sequences

1995 ◽  
Vol 68 (1) ◽  
pp. 19-33 ◽  
Author(s):  
G. Haase ◽  
L. Sonntag ◽  
Y. van de Peer ◽  
J. M. J. Uijthof ◽  
A. Podbielski ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Yeast Species ◽  
Small Subunit ◽  
Black Yeast ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Gene Sequences ◽  
Small Subunit Rrna Gene

Genetic interrelationships of proteolyticClostridium botulinum types A, B, and F and other members of theClostridium botulinum complex as revealed by small-subunit rRNA gene sequences

1994 ◽  
Vol 64 (3-4) ◽  
pp. 273-283 ◽  
Author(s):  
R. A. Hutson ◽  
D. E. Thompson ◽  
P. A. Lawson ◽  
R. P. Schocken-Itturino ◽  
E. C. B�ttger ◽  
...  
Keyword(s):  
Small Subunit ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Gene Sequences ◽  
Small Subunit Rrna Gene

Free-living nematodes associated with pine cones of Pinus thunbergii and P. taeda at Japanese coastal and inland forest sites

Nematology ◽  
2019 ◽  
Vol 21 (4) ◽  
pp. 389-400 ◽  
Author(s):  
Yudai Kitagami ◽  
Natsumi Kanzaki ◽  
Toko Tanikawa ◽  
Yosuke Matsuda
Keyword(s):  
Gene Sequence ◽  
Small Subunit ◽  
Pinus Thunbergii ◽  
Rrna Gene ◽  
Small Subunit Rrna ◽  
Free Living ◽  
Small Subunit Rrna Gene ◽  
Forest Sites ◽  
High Bootstrap ◽  
Pine Cones

Summary We surveyed the distribution of nematodes in 56 cones of Pinus thunbergii collected from both live branches and on the forest floor in three coastal and inland habitats and in 11 cones of P. taeda collected at different heights. We identified 47 nematodes to family or genera by analysis of an 18S small subunit rRNA gene sequence. The frequencies of occurrence of free-living cone nematodes were 97% in coastal P. thunbergii, 92% in inland P. thunbergii, and 82% in P. taeda. Phylogenetic analysis assigned the nematodes to four clades with high bootstrap values. Nine sequences that were found only in cones on live branches were clustered with Panagrobelus stammeri and an unknown Panagrobelus sp. Our results imply that nematodes are commonly associated with cones in pine forest ecosystems and that a capacity for anhydrobiosis may be a key to surviving above-ground.

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