Single VS Ribozyme Molecules Reveal Dynamic and Hierarchical Folding Toward Catalysis

Faculty Opinions recommendation of The A730 loop is an important component of the active site of the VS ribozyme.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1002344.15404 ◽

2001 ◽

Author(s):

Thorsten Dieckmann

Keyword(s):

Active Site ◽

Faculty Opinions recommendation of Efficient, pH-dependent RNA ligation by the VS ribozyme in trans.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1017137.202053 ◽

2004 ◽

Author(s):

Scott Silverman

Keyword(s):

Vs Ribozyme ◽

In Trans ◽

Rna Ligation ◽

Ph Dependent

Faculty Opinions recommendation of A guanine nucleobase important for catalysis by the VS ribozyme.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1088027.540993 ◽

2007 ◽

Author(s):

Thorsten Dieckmann

Keyword(s):

Faculty Opinions recommendation of An important role of G638 in the cis-cleavage reaction of the Neurospora VS ribozyme revealed by a novel nucleotide analog incorporation method.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1104483.560516 ◽

2008 ◽

Author(s):

Thorsten Dieckmann

Keyword(s):

Cleavage Reaction ◽

Vs Ribozyme ◽

Nucleotide Analog ◽

Incorporation Method

Polymer models of the hierarchical folding of the Hox-B chromosomal locus

Physical Review E ◽

10.1103/physreve.94.042402 ◽

2016 ◽

Vol 94 (4) ◽

Cited By ~ 17

Author(s):

Carlo Annunziatella ◽

Andrea M. Chiariello ◽

Simona Bianco ◽

Mario Nicodemi

Keyword(s):

Chromosomal Locus ◽

Polymer Models ◽

Hierarchical folding of elastic membranes under biaxial compressive stress

Nature Materials ◽

10.1038/nmat3144 ◽

2011 ◽

Vol 10 (12) ◽

pp. 952-957 ◽

Cited By ~ 168

Author(s):

Pilnam Kim ◽

Manouk Abkarian ◽

Howard A. Stone

Keyword(s):

Compressive Stress ◽

Elastic Membranes ◽

Hierarchical Folding of the rRNA in the Early Assembly of the E. Coli Ribosomal Small Subunit

Biophysical Journal ◽

10.1016/j.bpj.2013.11.4407 ◽

2014 ◽

Vol 106 (2) ◽

pp. 804a

Author(s):

Jonathan Lai ◽

Ke Chen ◽

Hajin Kim ◽

Taejkip Ha ◽

Zaida Luthey-Schulten

Keyword(s):

Small Subunit ◽

E Coli ◽

Functional Group Requirements in the Probable Active Site of the VS Ribozyme

Journal of Molecular Biology ◽

10.1016/s0022-2836(02)00910-5 ◽

2002 ◽

Vol 323 (1) ◽

pp. 23-34 ◽

Cited By ~ 36

Author(s):

Daniel A Lafontaine ◽

Timothy J Wilson ◽

Zheng-Yun Zhao ◽

David M.J Lilley

Keyword(s):

Active Site ◽

Functional Group ◽

Protein structure prediction using a docking-based hierarchical folding scheme

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.22999 ◽

2011 ◽

Vol 79 (6) ◽

pp. 1759-1773 ◽

Cited By ~ 3

Author(s):

Ilona Kifer ◽

Ruth Nussinov ◽

Haim J. Wolfson

Keyword(s):

Protein Structure ◽

Protein Structure Prediction ◽

Structure Prediction ◽

Folding and catalysis by the VS ribozyme

Biochimie ◽

10.1016/s0300-9084(02)01406-2 ◽

2002 ◽

Vol 84 (9) ◽

pp. 889-896 ◽

Cited By ~ 4

Author(s):

Daniel A. Lafontaine ◽

David G. Norman ◽

David M.J. Lilley

Keyword(s):