Morphological variation of iron toxicity tolerance in lowland rice (Oryza sativa L.) varieties

Rice (Oryza sativa L.) is a staple food crop in many countries in Africa. Africa consumes 11.6 million tons of rice per annum and out of 39 rice-producing countries, 21 import 50% to 99% of their rice requirements. The inability to reach the yield potential that would sustain Africa’s need for rice is due to many biotic and abiotic constraints that rice production faces. In lowland grown rice, one of the abiotic factors hindering rice production is iron toxicity. Excess uptake of ferrous (Fe2+) ions leads to a physiological stress, which results, into poor production. The current study aimed at selection of varieties tolerant to iron toxicity and assessment of the genetic diversity linked to this trait. In a hydroponic experiment conducted in a screen house at Africa Rice Centre in Dar es Salaam, 32 rice varieties were evaluated for tolerance to iron toxicity. The experiment was laid out in a split plot design with iron concentration as the main plot factor and variety as the sub plot factor. Two levels of iron concentration were used: 2 ppm and 300 ppm of Fe2+ as control and test concentrations, respectively. Traits observed to gauge tolerance were leaf bronzing (an indicator of iron toxicity), plant height, tillering, number of leaves, shoot weight (above ground), root length and root weight. The varieties ARICA8, and CK801 were found to be tolerant due to low bronzing indices, higher shoot weight, more number of leaves and lack of significant variation in morphology between the two Fe treatments except for the plant height. Correlation analysis depicted negative correlation between leaf bronzing and the other traits measured especially shoot biomass.

Rice backcross population assessment for iron tolerance through phenotypic and genotypic analyses

Iron toxicity has become a serious issue affecting rice (Oryza sativa L.) production in many irrigated lowland areas. The selection of Fe2+-tolerant rice cultivars under iron toxicity conditions and the identification of molecular markers are good approaches to obtaining tangible results. This study aimed to identify simple sequence repeat (SSR) markers that were associated with iron tolerance traits in a rice backcross population. A total of 117 seedlings from the backcross (BC3F2) of ‘OM6830’/‘AS996’//‘AS996’ were phenotyped at the 4-week-seedling stage at Ton Duc Thang University, Ho Chi Minh City, Vietnam. The rice population was screened in Yoshida nutrient medium supplemented with FeCl2 at a concentration of 150 mg L−1 under greenhouse conditions. Phenotypic analysis was conducted by scoring two parameters, namely, root length and leaf bronzing. Genotypic analysis was carried out on the BC3F2 population by using four markers, i.e., RM6, RM240, RM252, and RM451, for association analysis with iron tolerance. A total of 23 BC3F2 lines were selected on the basis of their higher tolerance (score 1) for Fe2+ compared with the tolerant parental line ‘AS996’. The markers RM6 and RM240 were highly polymorphic and identified different Fe2+-tolerant lines in the BC3F2 population. Among the BC3F3 progeny derived from the selected 23 BC3F2 lines, BC3F3-7 was identified as the most Fe2+-tolerant line. BC3F3-15 was also found to be Fe2+ tolerant. Both lines showed good development capability and provided high yields under stress conditions. These tolerant BC3F3 lines could be further screened with additional SSR markers in future breeding programs aiming to increase rice production in iron-contaminated areas of the Mekong Delta, Vietnam.

Leaf structural traits of two Restinga plant species with different resistance pattern to iron toxicity

Iron mining activities are a source of particulate iron, which contaminates soil and plants of Restinga biome (Brazil). To investigate the possible effects of iron toxicity to Ipomoea pes-caprae and Canavalia rosea leaves, plants were submitted to different exposure times (12, 36, 108 and 228 hours) and iron concentrations (0.5 or 150 mg L-1, Fe2+ as FeSO4.7H2O). After 108 hours C. rosea leaves were chlorotic while I. pes-caprae leaves presented venal chlorosis and bronzing after 228 hours, both from iron excess treatment. The anatomical alterations in I. pes-caprae were more intense and appeared earlier than in C. rosea, after 36 hours exposed to iron excess. The leaf epidermal cells of I. pes-caprae presented alterations in organization, size and shape and for both species the epicuticular wax was altered and wax rupture occurred close to the stomata. The positive staining for the presence of iron in leaf tissues matches with damaged areas in I. pes-caprae leaves, indicating direct iron toxicity. I. pes-caprae was the species with the most severe symptoms while C. rosea was the most resistant one. The results support that over time, the emission of particulate matter may negatively impact the ecological succession and biodiversity of Restinga.

Below-ground plant-soil interactions affecting adaptations of rice to iron toxicity

Iron toxicity is a major constraint to rice production, particularly in highly-weathered soils of inland valleys in sub-Saharan Africa where the rice area is rapidly expanding. Although there is wide variation in tolerance in the rice germplasm, progress in introgressing tolerance traits into high-yielding germplasm has been slow owing to the complexity of tolerance mechanisms and large genotype by environment effects. We review current understanding of tolerance mechanisms, particularly those involving below-ground plant-soil interactions, which to date have been less studied than above-ground mechanisms. We cover processes in the rhizosphere linked to exclusion of toxic ferrous iron by oxidation, and resulting effects on the mobility of nutrient ions. We also cover the molecular physiology of below-ground processes controlling Fe retention in roots and root-shoot transport, and also plant Fe sensing. We conclude that future breeding programs should be based on well-characterised molecular markers for tolerance traits. To successfully identify such markers, the complex tolerance response should be broken down into its components based on understanding of tolerance mechanisms, and tailored screening methods developed for individual mechanisms.

Bacterioferritin: a key iron storage modulator that affects strain growth and butenyl-spinosyn biosynthesis in Saccharopolyspora pogona

Background Butenyl-spinosyn, produced by Saccharopolyspora pogona, is a promising biopesticide due to excellent insecticidal activity and broad pesticidal spectrum. Bacterioferritin (Bfr, encoded by bfr) regulates the storage and utilization of iron, which is essential for the growth and metabolism of microorganisms. However, the effect of Bfr on the growth and butenyl-spinosyn biosynthesis in S. pogona has not been explored. Results Here, we found that the storage of intracellular iron influenced butenyl-spinosyn biosynthesis and the stress resistance of S. pogona, which was regulated by Bfr. The overexpression of bfr increased the production of butenyl-spinosyn by 3.14-fold and enhanced the tolerance of S. pogona to iron toxicity and oxidative damage, while the knockout of bfr had the opposite effects. Based on the quantitative proteomics analysis and experimental verification, the inner mechanism of these phenomena was explored. Overexpression of bfr enhanced the iron storage capacity of the strain, which activated polyketide synthase genes and enhanced the supply of acyl-CoA precursors to improve butenyl-spinosyn biosynthesis. In addition, it induced the oxidative stress response to improve the stress resistance of S. pogona. Conclusion Our work reveals the role of Bfr in increasing the yield of butenyl-spinosyn and enhancing the stress resistance of S. pogona, and provides insights into its enhancement on secondary metabolism, which provides a reference for optimizing the production of secondary metabolites in actinomycetes.

An Internal Promoter Drives the Expression of a Truncated Form of CCC1 Capable of Protecting Yeast from Iron Toxicity

In yeast, iron storage and detoxification depend on the Ccc1 transporter that mediates iron accumulation in vacuoles. While deletion of the CCC1 gene renders cells unable to survive under iron overload conditions, the deletion of its previously identified regulators only partially affects survival, indicating that the mechanisms controlling iron storage and detoxification in yeast are still far from well understood. This work reveals that CCC1 is equipped with a complex transcriptional structure comprising several regulatory regions. One of these is located inside the coding sequence of the gene and drives the expression of a short transcript encoding an N-terminally truncated protein, designated as s-Ccc1. s-Ccc1, though less efficiently than Ccc1, is able to promote metal accumulation in the vacuole, protecting cells against iron toxicity. While the expression of the s-Ccc1 appears to be repressed in the normal genomic context, our current data clearly demonstrates that it is functional and has the capacity to play a role under iron overload conditions.