Intermolecular Potential for Binding of Protonated Peptide Ions with Perfluorinated Hydrocarbon Surfaces

2014 ◽  
Vol 118 (20) ◽  
pp. 5577-5588 ◽  
Author(s):  
Subha Pratihar ◽  
Swapnil C. Kohale ◽  
Saulo A. Vázquez ◽  
William L. Hase
Keyword(s):  
Protonated Peptide ◽  
Intermolecular Potential ◽  
Peptide Ions

Intermolecular Potential To Represent Collisions of Protonated Peptide Ions with Fluorinated Alkane Surfaces†

2005 ◽  
Vol 109 (17) ◽  
pp. 8320-8324 ◽  
Author(s):  
Jiangping Wang ◽  
William L. Hase
Keyword(s):  
Protonated Peptide ◽  
Intermolecular Potential ◽  
Peptide Ions

Chemical dynamics simulations of energy transfer, surface-induced dissociation, soft-landing, and reactive-landing in collisions of protonated peptide ions with organic surfaces

2016 ◽  
Vol 45 (13) ◽  
pp. 3595-3608 ◽  
Author(s):  
Subha Pratihar ◽  
George L. Barnes ◽  
William L. Hase
Keyword(s):  
Energy Transfer ◽  
Protonated Peptide ◽  
Chemical Dynamics ◽  
Peptide Ions ◽  
Soft Landing ◽  
Surface Induced Dissociation ◽  
Organic Surfaces ◽  
Dynamics Simulations ◽  
Reactive Landing

Different simulation approaches like MM, QM + MM, and QM/MM, were used to study surface-induced dissociation, soft-landing, and reactive-landing for the peptide-H+ + surface collisions.

Chemical Dynamics Simulations of Energy Transfer in Collisions of Protonated Peptide−Ions with a Perfluorinated Alkylthiol Self-Assembled Monolayer Surface

2008 ◽  
Vol 112 (25) ◽  
pp. 9377-9386 ◽  
Author(s):  
Li Yang ◽  
Oleg A. Mazyar ◽  
U. Lourderaj ◽  
Jiangping Wang ◽  
M. T. Rodgers ◽  
...  
Keyword(s):  
Energy Transfer ◽  
Protonated Peptide ◽  
Chemical Dynamics ◽  
Peptide Ions ◽  
Self Assembled Monolayer ◽  
Self Assembled ◽  
Dynamics Simulations

Fragmentation of Protonated Peptide Ions via Interaction with Metastable Atoms

2006 ◽  
Vol 78 (9) ◽  
pp. 3055-3061 ◽  
Author(s):  
Vadym D. Berkout
Keyword(s):  
Protonated Peptide ◽  
Peptide Ions

scholarly journals Optimization of electrospray ionization conditions to enhance formation of doubly protonated peptide ions with and without addition of chromium(III)

2017 ◽  
Vol 31 (13) ◽  
pp. 1129-1136 ◽  
Author(s):  
Juliette J. Commodore ◽  
Xinyao Jing ◽  
Carolyn J. Cassady
Keyword(s):  
Electrospray Ionization ◽  
Protonated Peptide ◽  
Peptide Ions

Elucidation of Fragmentation Mechanisms of Protonated Peptide Ions and Their Products:  A Case Study on Glycylglycylglycine Using Density Functional Theory and Threshold Collision-Induced Dissociation

2003 ◽  
Vol 125 (30) ◽  
pp. 9229-9236 ◽  
Author(s):  
Houssain El Aribi ◽  
Christopher F. Rodriquez ◽  
David R. P. Almeida ◽  
Yun Ling ◽  
William W.-N. Mak ◽  
...  
Keyword(s):  
Density Functional Theory ◽  
Density Functional ◽  
Protonated Peptide ◽  
Collision Induced Dissociation ◽  
Peptide Ions ◽  
Functional Theory ◽  
Fragmentation Mechanisms
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