Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data

C. Chang; Z. Ding; Y. S. Hung; P. C. W. Fung

doi:10.1093/bioinformatics/btn131

Fast network component analysis (FastNCA) for gene regulatory network reconstruction from microarray data

Bioinformatics ◽

10.1093/bioinformatics/btn131 ◽

2008 ◽

Vol 24 (11) ◽

pp. 1349-1358 ◽

Cited By ~ 58

Author(s):

C. Chang ◽

Z. Ding ◽

Y. S. Hung ◽

P. C. W. Fung

Keyword(s):

Gene Regulatory Network ◽

Microarray Data ◽

Regulatory Network ◽

Component Analysis ◽

Network Reconstruction ◽

Network Component Analysis ◽

Fast Network ◽

Gene Regulatory ◽

Network Component

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PFastNCA: Parallel Fast Network Component Analysis for Gene Regulatory Network

The International Conference on Advanced Machine Learning Technologies and Applications (AMLTA2018) - Advances in Intelligent Systems and Computing ◽

10.1007/978-3-319-74690-6_57 ◽

2018 ◽

pp. 585-594 ◽

Cited By ~ 2

Author(s):

Dina Elsayad ◽

A. Ali ◽

Howida A. Shedeed ◽

M. F. Tolba

Keyword(s):

Gene Regulatory Network ◽

Regulatory Network ◽

Component Analysis ◽

Network Component Analysis ◽

Fast Network ◽

Gene Regulatory ◽

Network Component

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Nonnegative Network Component Analysis by Linear Programming for Gene Regulatory Network Reconstruction

Independent Component Analysis and Signal Separation - Lecture Notes in Computer Science ◽

10.1007/978-3-642-00599-2_50 ◽

2009 ◽

pp. 395-402 ◽

Cited By ~ 1

Author(s):

Chunqi Chang ◽

Zhi Ding ◽

Yeung Sam Hung

Keyword(s):

Linear Programming ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Component Analysis ◽

Network Reconstruction ◽

Network Component Analysis ◽

Gene Regulatory ◽

Network Component

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An Efficient Convex Nonnegative Network Component Analysis for Gene Regulatory Network Reconstruction

Pattern Recognition in Bioinformatics - Lecture Notes in Computer Science ◽

10.1007/978-3-642-04031-3_6 ◽

2009 ◽

pp. 56-66 ◽

Cited By ~ 1

Author(s):

Jisheng Dai ◽

Chunqi Chang ◽

Zhongfu Ye ◽

Yeung Sam Hung

Keyword(s):

Gene Regulatory Network ◽

Regulatory Network ◽

Component Analysis ◽

Network Reconstruction ◽

Network Component Analysis ◽

Gene Regulatory ◽

Network Component

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Parallel network component analysis technique for gene regulatory network inference

Concurrency and Computation Practice and Experience ◽

10.1002/cpe.6458 ◽

2021 ◽

Author(s):

Dina Elsayad ◽

Safwat Hamad ◽

Howida A. Shedeed ◽

Mohamed F. Tolba

Keyword(s):

Gene Regulatory Network ◽

Regulatory Network ◽

Network Inference ◽

Component Analysis ◽

Network Component Analysis ◽

Gene Regulatory Network Inference ◽

Analysis Technique ◽

Parallel Network ◽

Gene Regulatory ◽

Network Component

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Gene Regulatory Network Construction Parallel Technique Based on Network Component Analysis

Advances in Intelligent Systems and Computing - Proceedings of the International Conference on Artificial Intelligence and Computer Vision (AICV2020) ◽

10.1007/978-3-030-44289-7_80 ◽

2020 ◽

pp. 850-857

Author(s):

Dina Elsayad ◽

Safwat Hamad ◽

Howida A. Shedeed ◽

Mohamed F. Tolba

Keyword(s):

Gene Regulatory Network ◽

Regulatory Network ◽

Component Analysis ◽

Network Component Analysis ◽

Network Construction ◽

Gene Regulatory ◽

Network Component ◽

Parallel Technique

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Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory network

BMC Systems Biology ◽

10.1186/1752-0509-7-126 ◽

2013 ◽

Vol 7 (1) ◽

pp. 126 ◽

Cited By ~ 8

Author(s):

Ashish Misra ◽

Ganesh Sriram

Keyword(s):

Transcription Factor ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Component Analysis ◽

Network Component Analysis ◽

Transcription Factor Gene ◽

Factor Gene ◽

Gene Regulatory ◽

Network Component

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Integrative Network Component Analysis for Regulatory Network Reconstruction

Bioinformatics Research and Applications - Lecture Notes in Computer Science ◽

10.1007/978-3-540-79450-9_19 ◽

2008 ◽

pp. 196-207

Author(s):

Chen Wang ◽

Jianhua Xuan ◽

Li Chen ◽

Po Zhao ◽

Yue Wang ◽

...

Keyword(s):

Regulatory Network ◽

Component Analysis ◽

Network Reconstruction ◽

Network Component Analysis ◽

Network Component ◽

Integrative Network

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An Integrative Tool for Gene Regulatory Network Reconstruction Based on Microarray Data

2009 Ninth IEEE International Conference on Bioinformatics and BioEngineering ◽

10.1109/bibe.2009.44 ◽

2009 ◽

Author(s):

J.W. Ou ◽

R.M. Hu ◽

R.M. Chen ◽

C.Y. Tang ◽

Jeffrey J.P. Tsai

Keyword(s):

Gene Regulatory Network ◽

Microarray Data ◽

Regulatory Network ◽

Network Reconstruction ◽

Gene Regulatory

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Fast Network Component Analysis for Gene Regulation Networks

2007 IEEE Workshop on Machine Learning for Signal Processing ◽

10.1109/mlsp.2007.4414276 ◽

2007 ◽

Cited By ~ 3

Author(s):

Chunqi Chang ◽

Zhi Ding ◽

Yeung Sam Hung ◽

Peter C.W. Fung

Keyword(s):

Gene Regulation ◽

Component Analysis ◽

Network Component Analysis ◽

Gene Regulation Networks ◽

Fast Network ◽

Network Component

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Dynamic gene regulatory network reconstruction and analysis based on clinical transcriptomic data of colorectal cancer

Mathematical Biosciences and Engineering ◽

10.3934/mbe.2020183 ◽

2020 ◽

Vol 17 (4) ◽

pp. 3224-3239

Author(s):

Ancheng Deng ◽

◽

Xiaoqiang Sun ◽

Keyword(s):

Colorectal Cancer ◽

Gene Regulatory Network ◽

Regulatory Network ◽

Network Reconstruction ◽

Transcriptomic Data ◽

Gene Regulatory

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