WegoLoc: accurate prediction of protein subcellular localization using weighted Gene Ontology terms

Bioinformatics ◽

10.1093/bioinformatics/bts062 ◽

2012 ◽

Vol 28 (7) ◽

pp. 1028-1030 ◽

Author(s):

S.-M. Chi ◽

D. Nam

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Accurate Prediction ◽

Protein Subcellular Localization

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Protein subcellular localization prediction based on profile alignment and Gene Ontology

2011 IEEE International Workshop on Machine Learning for Signal Processing ◽

10.1109/mlsp.2011.6064613 ◽

2011 ◽

Author(s):

Shibiao Wan ◽

Man-Wai Mak ◽

Sun-Yuan Kung

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction ◽

Profile Alignment

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Semi-automated curation of protein subcellular localization: a text mining-based approach to Gene Ontology (GO) cellular component curation

BMC Bioinformatics ◽

10.1186/1471-2105-10-228 ◽

2009 ◽

Vol 10 (1) ◽

pp. 228 ◽

Author(s):

Kimberly Van Auken ◽

Joshua Jaffery ◽

Juancarlos N Chan ◽

Hans-Michael Muller ◽

Paul W Sternberg

Keyword(s):

Gene Ontology ◽

Text Mining ◽

Subcellular Localization ◽

Cellular Component ◽

Protein Subcellular Localization

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A new similarity measure over Gene Ontology with application to protein subcellular localization

2010 3rd International Conference on Biomedical Engineering and Informatics ◽

10.1109/bmei.2010.5639786 ◽

2010 ◽

Author(s):

Yang Yang

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Similarity Measure ◽

Protein Subcellular Localization

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Multi-location gram-positive and gram-negative bacterial protein subcellular localization using gene ontology and multi-label classifier ensemble

BMC Bioinformatics ◽

10.1186/1471-2105-16-s12-s1 ◽

2015 ◽

Vol 16 (Suppl 12) ◽

pp. S1 ◽

Author(s):

Xiao Wang ◽

Jun Zhang ◽

Guo-Zheng Li

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Classifier Ensemble ◽

Bacterial Protein ◽

Protein Subcellular Localization ◽

Gram Positive ◽

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Hum-mPLoc 3.0: prediction enhancement of human protein subcellular localization through modeling the hidden correlations of gene ontology and functional domain features

Bioinformatics ◽

10.1093/bioinformatics/btw723 ◽

2016 ◽

pp. btw723 ◽

Author(s):

Hang Zhou ◽

Yang Yang ◽

Hong-Bin Shen

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Human Protein ◽

Functional Domain ◽

Protein Subcellular Localization ◽

Hidden Correlations

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GOASVM: Protein subcellular localization prediction based on Gene ontology annotation and SVM

2012 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) ◽

10.1109/icassp.2012.6288356 ◽

2012 ◽

Author(s):

Shibiao Wan ◽

Man-Wai Mak ◽

Sun-Yuan Kung

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Gene Ontology Annotation ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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Gene ontology based transfer learning for protein subcellular localization

BMC Bioinformatics ◽

10.1186/1471-2105-12-44 ◽

2011 ◽

Vol 12 (1) ◽

Author(s):

Suyu Mei ◽

Wang Fei ◽

Shuigeng Zhou

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Transfer Learning ◽

Protein Subcellular Localization

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Prediction of protein subcellular localization by weighted gene ontology terms

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2010.07.086 ◽

2010 ◽

Vol 399 (3) ◽

pp. 402-405 ◽

Author(s):

Sang-Mun Chi

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Protein Subcellular Localization

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ProLoc-GO: Utilizing informative Gene Ontology terms for sequence-based prediction of protein subcellular localization

BMC Bioinformatics ◽

10.1186/1471-2105-9-80 ◽

2008 ◽

Vol 9 (1) ◽

pp. 80 ◽

Author(s):

Wen-Lin Huang ◽

Chun-Wei Tung ◽

Shih-Wen Ho ◽

Shiow-Fen Hwang ◽

Shinn-Ying Ho

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Protein Subcellular Localization ◽

Informative Gene

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Predicting protein subcellular localization based on information content of gene ontology terms

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2016.09.009 ◽

2016 ◽

Vol 65 ◽

pp. 1-7 ◽

Author(s):

Shu-Bo Zhang ◽

Qiang-Rong Tang

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Information Content ◽

Protein Subcellular Localization

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