scholarly journals Small RNA Silencing Pathways in Germ and Stem Cells

2008 ◽  
Vol 73 (0) ◽  
pp. 283-290 ◽  
Author(s):  
A.A. Aravin ◽  
G.J. Hannon
2020 ◽  
Vol 48 (4) ◽  
pp. 2050-2072 ◽  
Author(s):  
Margarita T Angelova ◽  
Dilyana G Dimitrova ◽  
Bruno Da Silva ◽  
Virginie Marchand ◽  
Caroline Jacquier ◽  
...  

Abstract 2′-O-Methylation (Nm) represents one of the most common RNA modifications. Nm affects RNA structure and function with crucial roles in various RNA-mediated processes ranging from RNA silencing, translation, self versus non-self recognition to viral defense mechanisms. Here, we identify two Nm methyltransferases (Nm-MTases) in Drosophila melanogaster (CG7009 and CG5220) as functional orthologs of yeast TRM7 and human FTSJ1. Genetic knockout studies together with MALDI-TOF mass spectrometry and RiboMethSeq mapping revealed that CG7009 is responsible for methylating the wobble position in tRNAPhe, tRNATrp and tRNALeu, while CG5220 methylates position C32 in the same tRNAs and also targets additional tRNAs. CG7009 or CG5220 mutant animals were viable and fertile but exhibited various phenotypes such as lifespan reduction, small RNA pathways dysfunction and increased sensitivity to RNA virus infections. Our results provide the first detailed characterization of two TRM7 family members in Drosophila and uncover a molecular link between enzymes catalyzing Nm at specific tRNAs and small RNA-induced gene silencing pathways.


2007 ◽  
pp. 75-88
Author(s):  
Phillip Zamore ◽  
Alla Sigova

RNA ◽  
2014 ◽  
Vol 20 (12) ◽  
pp. 1987-1999 ◽  
Author(s):  
Tadeusz Wroblewski ◽  
Marta Matvienko ◽  
Urszula Piskurewicz ◽  
Huaqin Xu ◽  
Belinda Martineau ◽  
...  

2017 ◽  
Author(s):  
Samuel H. Lewis ◽  
Kaycee A. Quarles ◽  
Yujing Yang ◽  
Melanie Tanguy ◽  
Lise Frézal ◽  
...  

AbstractIn animals, small RNA molecules termed PIWI-interacting RNAs (piRNAs) silence transposable elements (TEs), protecting the germline from genomic instability and mutation. piRNAs have been detected in the soma in a few animals, but these are believed to be specific adaptations of individual species. Here, we report that somatic piRNAs were likely present in the ancestral arthropod more than 500 million years ago. Analysis of 20 species across the arthropod phylum suggests that somatic piRNAs targeting TEs and mRNAs are common among arthropods. The presence of an RNA-dependent RNA polymerase in chelicerates (horseshoe crabs, spiders, scorpions) suggests that arthropods originally used a plant-like RNA interference mechanism to silence TEs. Our results call into question the view that the ancestral role of the piRNA pathway was to protect the germline and demonstrate that small RNA silencing pathways have been repurposed for both somatic and germline functions throughout arthropod evolution.


2016 ◽  
Vol 20 (3) ◽  
pp. 191-198 ◽  
Author(s):  
Chin-Han Tsai ◽  
Ko-Hsun Liao ◽  
Chuan-Chi Shih ◽  
Chia-Hao Chan ◽  
Jui-Yu Hsieh ◽  
...  

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