Fast tamper location of batch DNA sequences based on reversible data hiding

Author(s):  
Juntao Fu ◽  
Weiming Zhang ◽  
Nenghai Yu ◽  
Guoli Ma ◽  
Qi Tang
2014 ◽  
Vol 6 (4) ◽  
pp. 1-13 ◽  
Author(s):  
Qi Tang ◽  
Guoli Ma ◽  
Weiming Zhang ◽  
Nenghai Yu

As the blueprint of vital activities of most living things on earth, DNA has important status and must be protected perfectly. And in current DNA databases, each sequence is stored with several notes that help to describe that sequence. However, these notes have no contribution to the protection of sequences. In this paper, the authors propose a reversible data hiding method for DNA sequences, which could be used either to embed sequence-related annotations, or to detect and restore tampers. When embedding sequence annotations, the methods works in low embedding rate mode. Only several bits of annotations are embedded. When used for tamper detection and tamper restoration, all possible embedding positions are utilized to assure the maximum restoration capacity.


2018 ◽  
Vol 2018 ◽  
pp. 1-13 ◽  
Author(s):  
Suk-Hwan Lee

A large number of studies have examined DNA storage to achieve information hiding in DNA sequences with DNA computing technology. However, most data hiding methods are irreversible in that the original DNA sequence cannot be recovered from the watermarked DNA sequence. This study presents reversible data hiding methods based on multilevel histogram shifting to prevent biological mutations, preserve sequence length, increase watermark capacity, and facilitate blind detection/recovery. The main features of our method are as follows. First, we encode a sequence of nucleotide bases with four-character symbols into integer values using the numeric order. Second, we embed multiple bits in each integer value by multilevel histogram shifting of noncircular type (NHS) and circular type (CHS). Third, we prevent the generation of false start/stop codons by verifying whether a start/stop codon is included in an integer value or between adjacent integer values. The results of our experiments confirmed that the NHS- and CHS-based methods have higher watermark capacities than conventional methods in terms of supplementary data used for decoding. Moreover, unlike conventional methods, our methods do not generate false start/stop codons.


2018 ◽  
Vol 30 (10) ◽  
pp. 1954
Author(s):  
Xiangguang Xiong ◽  
Yongfeng Cao ◽  
Weihua Ou ◽  
Bin Liu ◽  
Li Wei ◽  
...  

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