Multiple Biological Sequence Alignment with a Parallel Island Injection Genetic Algorithm

2010 IEEE 12th International Conference on High Performance Computing and Communications (HPCC) ◽

10.1109/hpcc.2010.31 ◽

2010 ◽

Author(s):

Lidia A Miranda ◽

Marcos A F Caetano ◽

Alba C M A Melo ◽

Jan M Correa ◽

Jacir L Bordim

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Biological Sequence

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Epigenetically Inspired Modification of Genetic Algorithm and His Efficiency on Biological Sequence Alignment

Intelligent Decision Technologies 2016 - Smart Innovation, Systems and Technologies ◽

10.1007/978-3-319-39627-9_9 ◽

2016 ◽

pp. 95-105

Author(s):

Kornel Chromiński ◽

Mariusz Boryczka

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Biological Sequence

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A hybrid genetic algorithm with chemical reaction optimization for multiple sequence alignment.

2019 22nd International Conference on Computer and Information Technology (ICCIT) ◽

10.1109/iccit48885.2019.9038510 ◽

2019 ◽

Author(s):

Sajib Chatterjee ◽

Promal barua ◽

M. M. Hasibuzzaman ◽

Afrin Iftiea ◽

Tarpan Mukharjee ◽

...

Keyword(s):

Genetic Algorithm ◽

Chemical Reaction ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Hybrid Genetic Algorithm ◽

Chemical Reaction Optimization ◽

Multiple Sequence ◽

Reaction Optimization

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Multiple Biological Sequence Alignment: Scoring Functions, Algorithms and Applications

10.1002/9781119273769 ◽

2016 ◽

Author(s):

Ken Nguyen ◽

Xuan Guo ◽

Yi Pan

Keyword(s):

Sequence Alignment ◽

Scoring Functions ◽

Biological Sequence

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Novel use of a genetic algorithm for protein structure prediction: Searching template and sequence alignment space

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.10549 ◽

2003 ◽

Vol 53 (S6) ◽

pp. 424-429 ◽

Author(s):

Bruno Contreras-Moreira ◽

Paul W. Fitzjohn ◽

Marc Offman ◽

Graham R. Smith ◽

Paul A. Bates

Keyword(s):

Genetic Algorithm ◽

Protein Structure ◽

Protein Structure Prediction ◽

Sequence Alignment ◽

Structure Prediction

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Top-Down Motif Discovery in Biological Sequence Datasets by Genetic Algorithm

2006 International Conference on Hybrid Information Technology ◽

10.1109/ichit.2006.253597 ◽

2006 ◽

Author(s):

Ulas BALOGLU ◽

Mehmet KAYA

Keyword(s):

Genetic Algorithm ◽

Motif Discovery ◽

Biological Sequence ◽

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A Highly Parameterized and Efficient FPGA-Based Skeleton for Pairwise Biological Sequence Alignment

IEEE Transactions on Very Large Scale Integration (VLSI) Systems ◽

10.1109/tvlsi.2008.2005314 ◽

2009 ◽

Vol 17 (4) ◽

pp. 561-570 ◽

Author(s):

K. Benkrid ◽

Ying Liu ◽

A. Benkrid

Keyword(s):

Sequence Alignment ◽

Biological Sequence

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Recent Advances in the Walking Tree Method for Biological Sequence Alignment

Computer Aided Systems Theory - EUROCAST 2003 - Lecture Notes in Computer Science ◽

10.1007/978-3-540-45210-2_32 ◽

2003 ◽

pp. 349-359 ◽

Author(s):

Paul Cull ◽

Tai Hsu

Keyword(s):

Sequence Alignment ◽

Biological Sequence ◽

Recent Advances ◽

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A Multigroup Parallel Genetic Algorithm for Multiple Sequence Alignment

Artificial Intelligence and Computational Intelligence - Lecture Notes in Computer Science ◽

10.1007/978-3-642-23881-9_41 ◽

2011 ◽

pp. 308-316 ◽

Author(s):

Jiawei Luo ◽

Li Zhang ◽

Cheng Liang

Keyword(s):

Genetic Algorithm ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Parallel Genetic Algorithm ◽

Multiple Sequence

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Ant Colony with Genetic Algorithm Based on Planar Graph for Multiple Sequence Alignment

Information Technology Journal ◽

10.3923/itj.2010.274.281 ◽

2010 ◽

Vol 9 (2) ◽

pp. 274-281 ◽

Author(s):

Xuyu Xiang ◽

Dafan Zhang ◽

Jiaohua Qin ◽

Yuanyuan Fu

Keyword(s):

Genetic Algorithm ◽

Planar Graph ◽

Sequence Alignment ◽

Multiple Sequence Alignment ◽

Multiple Sequence

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Research and Implementation of Biological Sequence Alignment Algorithm

International Conference on Measurement and Control Engineering 2nd (ICMCE 2011) ◽

10.1115/1.859858.paper32 ◽

2011 ◽

pp. 221-228

Keyword(s):

Sequence Alignment ◽

Alignment Algorithm ◽

Biological Sequence ◽

Sequence Alignment Algorithm

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