Automated Extraction and Visualization of Protein–Protein Interaction Networks and Beyond: A Text-Mining Protocol

Interaction Networks ◽

Automated Extraction ◽

Faculty Opinions recommendation of Modular decomposition of protein-protein interaction networks.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020428.232579 ◽

2004 ◽

Author(s):

Ruedi Aebersold

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Modular Decomposition ◽

Faculty Opinions recommendation of Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718178553.793487291 ◽

2013 ◽

Author(s):

Marc Therrien ◽

Dariel Ashton-Beaucage

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review

Computational and Structural Biotechnology Journal ◽

10.1016/j.csbj.2019.05.007 ◽

2019 ◽

Vol 17 ◽

pp. 805-811 ◽

Cited By ~ 7

Author(s):

Kumar Yugandhar ◽

Shagun Gupta ◽

Haiyuan Yu

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Interaction Networks ◽

2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

Better Link Prediction for Protein-Protein Interaction Networks

10.1109/bibe50027.2020.00017 ◽

2020 ◽

Author(s):

Ho Yin Yuen ◽

Jesper Jansson

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Interaction Networks ◽

Is the intrinsic disorder of proteins the cause of the scale-free architecture of protein–protein interaction networks?

PROTEOMICS ◽

10.1002/pmic.200600455 ◽

2007 ◽

Vol 7 (6) ◽

pp. 961-964 ◽

Cited By ~ 15

Author(s):

Santiago Schnell ◽

Santo Fortunato ◽

Sourav Roy

Keyword(s):

Protein Interaction ◽

Intrinsic Disorder ◽

Interaction Networks ◽

Scale Free ◽

On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks

2013 IEEE 13th International Conference on Data Mining Workshops ◽

10.1109/icdmw.2013.126 ◽

2013 ◽

Cited By ~ 1

Author(s):

Rohan Khazanchi ◽

Kathryn Dempsey ◽

Ishwor Thapa ◽

Hesham Ali

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Establishing a protein-protein interaction networks for hypertrophic cardiomyopathy

Journal of Electrocardiology ◽

10.1016/j.jelectrocard.2010.12.114 ◽

2011 ◽

Vol 44 (2) ◽

pp. e47-e48

Author(s):

Chia-Chun Lu ◽

Ching-Shiun Chang ◽

Ming-Ju Tsai ◽

Yu-Shan Chen ◽

Yueh Chen ◽

...

Keyword(s):

Hypertrophic Cardiomyopathy ◽

Protein Interaction ◽

Interaction Networks ◽

Effect of Alternative Splicing on the Degree Centrality of Nodes in Protein–Protein Interaction Networks of Homo sapiens

Journal of Proteome Research ◽

10.1021/pr4000812 ◽

2013 ◽

Vol 12 (4) ◽

pp. 1980-1988 ◽

Cited By ~ 7

Author(s):

Anupam Sinha ◽

Hampapathalu Adimurthy Nagarajaram

Keyword(s):

Alternative Splicing ◽

Protein Interaction ◽

Homo Sapiens ◽

Interaction Networks ◽

Degree Centrality ◽

Influence of homology and node age on the growth of protein-protein interaction networks

Physical Review E ◽

10.1103/physreve.86.041919 ◽

2012 ◽

Vol 86 (4) ◽

Author(s):

Arianna Bottinelli ◽

Bruno Bassetti ◽

Marco Cosentino Lagomarsino ◽

Marco Gherardi

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Construction of reliable protein-protein interaction networks with a new interaction generality measure

Bioinformatics ◽

10.1093/bioinformatics/btg070 ◽

2003 ◽

Vol 19 (6) ◽

pp. 756-763 ◽

Cited By ~ 83

Author(s):

R. Saito ◽

H. Suzuki ◽

Y. Hayashizaki

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽