Fully Convolutional Network-Based Eyeball Segmentation from Sparse Annotation for Eye Surgery Simulation Model

2018 ◽  
pp. 118-126 ◽  
Author(s):  
Takaaki Sugino ◽  
Holger R. Roth ◽  
Masahiro Oda ◽  
Kensaku Mori
Keyword(s):  
Simulation Model ◽  
Surgery Simulation ◽  
Convolutional Network ◽  
Fully Convolutional Network ◽  
Eye Surgery

scholarly journals MaskNet: A Fully-Convolutional Network to Estimate Inlier Points

2020 ◽  
Author(s):  
Vinit Sarode ◽  
Animesh Dhagat ◽  
Rangaprasad Arun Srivatsan ◽  
Nicolas Zevallos ◽  
Simon Lucey ◽  
...  
Keyword(s):  
Convolutional Network ◽  
Fully Convolutional Network

scholarly journals Parallel Fully Convolutional Network for Semantic Segmentation

IEEE Access ◽  
2021 ◽  
Vol 9 ◽  
pp. 673-682
Author(s):  
Jian Ji ◽  
Xiaocong Lu ◽  
Mai Luo ◽  
Minghui Yin ◽  
Qiguang Miao ◽  
...  
Keyword(s):  
Semantic Segmentation ◽  
Convolutional Network ◽  
Fully Convolutional Network

scholarly journals Convolutional Neural Network-Based Artificial Intelligence for Classification of Protein Localization Patterns

Biomolecules ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 264
Author(s):  
Kaisa Liimatainen ◽  
Riku Huttunen ◽  
Leena Latonen ◽  
Pekka Ruusuvuori
Keyword(s):  
Neural Network ◽  
Artificial Intelligence ◽  
Convolutional Neural Network ◽  
High Throughput ◽  
Protein Function ◽  
Protein Localization ◽  
Convolutional Network ◽  
High Throughput Analysis ◽  
Fully Convolutional Network

Identifying localization of proteins and their specific subpopulations associated with certain cellular compartments is crucial for understanding protein function and interactions with other macromolecules. Fluorescence microscopy is a powerful method to assess protein localizations, with increasing demand of automated high throughput analysis methods to supplement the technical advancements in high throughput imaging. Here, we study the applicability of deep neural network-based artificial intelligence in classification of protein localization in 13 cellular subcompartments. We use deep learning-based on convolutional neural network and fully convolutional network with similar architectures for the classification task, aiming at achieving accurate classification, but importantly, also comparison of the networks. Our results show that both types of convolutional neural networks perform well in protein localization classification tasks for major cellular organelles. Yet, in this study, the fully convolutional network outperforms the convolutional neural network in classification of images with multiple simultaneous protein localizations. We find that the fully convolutional network, using output visualizing the identified localizations, is a very useful tool for systematic protein localization assessment.

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