scholarly journals Quantifying the concentration dependence of sedimentation coefficients for globular macromolecules: a continuing age-old problem

Author(s):  
Donald J. Winzor ◽  
Vlad Dinu ◽  
David J. Scott ◽  
Stephen E. Harding

AbstractThis retrospective investigation has established that the early theoretical attempts to directly incorporate the consequences of radial dilution into expressions for variation of the sedimentation coefficient as a function of the loading concentration in sedimentation velocity experiments require concentration distributions exhibiting far greater precision than that achieved by the optical systems of past and current analytical ultracentrifuges. In terms of current methods of sedimentation coefficient measurement, until such improvement is made, the simplest procedure for quantifying linear s-c dependence (or linear concentration dependence of 1/s) for dilute systems therefore entails consideration of the sedimentation coefficient obtained by standard c(s), g*(s) or G(s) analysis) as an average parameter ($$ \overline{s} $$ s ¯ ) that pertains to the corresponding mean plateau concentration (following radial dilution) ($$ \overline{c} $$ c ¯ ) over the range of sedimentation velocity distributions used for the determination of $$ \overline{s} $$ s ¯ . The relation of this with current descriptions of the concentration dependence of the sedimentation and translational diffusion coefficients is considered, together with a suggestion for the necessary improvement in the optical system.

The Analyst ◽  
2014 ◽  
Vol 139 (23) ◽  
pp. 6242-6248 ◽  
Author(s):  
David J. Scott ◽  
Stephen E. Harding ◽  
Donald J. Winzor

This investigation examines published results of traditional diffusion experiments on ovalbumin and bovine serum albumin to determine the extent to which assumed concentration independence of the translational diffusion coefficient is a reasonable approximation in the analysis of boundary spreading in sedimentation velocity experiments on proteins.


1988 ◽  
Vol 79 (3) ◽  
pp. 474-492 ◽  
Author(s):  
D.A Cleary ◽  
Y.-K Shin ◽  
D.J Schneider ◽  
J.H Freed

1989 ◽  
Vol 54 (7) ◽  
pp. 1808-1820
Author(s):  
Simon King ◽  
Lars-Olof Sundelöf ◽  
Bedřich Porsch

Simple modification of the method of cumulants for an evaluation of QELSS data within the error limit of 2% in the case of narrow polymers is suggested. Model calculations of the deviations from the exponential decay due to polydispersity are presented, criteria of applicability of the 1st and 2nd cumulant fit at a given accuracy are derived and verified experimentally. The required agreement between the classical and QELSS diffusion constant is achieved if the QELSS measurements are made at concentrations where the effect of concentration dependence of the diffusion constant may be neglected.


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