Importance of enzyme and solvent physical properties for the biocompatibility relationship of α-amino acid ester hydrolase

1993 ◽  
Vol 15 (2) ◽  
pp. 114-119 ◽  
Author(s):  
M.David MacNaughtan ◽  
Andrew J. Daugulis
1980 ◽  
Vol 44 (5) ◽  
pp. 1075-1081
Author(s):  
Koichi Kato ◽  
Kenji Kawahara ◽  
Takeshi Takahashi ◽  
Atsushi Kakinuma

2001 ◽  
Vol 11 (4-6) ◽  
pp. 633-638 ◽  
Author(s):  
Roberto Fernandez-Lafuente ◽  
Odette Hernández-Jústiz ◽  
Cesar Mateo ◽  
Marco Terreni ◽  
Jorge Alonso ◽  
...  

2008 ◽  
Vol 283 (14) ◽  
pp. 9318-9327 ◽  
Author(s):  
Longsheng Lai ◽  
Zhaohui Xu ◽  
Jiahai Zhou ◽  
Kyung-Dall Lee ◽  
Gordon L. Amidon

Acta Naturae ◽  
2013 ◽  
Vol 5 (4) ◽  
pp. 62-70 ◽  
Author(s):  
S. A. Zarubina ◽  
I. V. Uporov ◽  
E. A. Fedorchuk ◽  
V. V. Fedorchuk ◽  
A. V. Sklyarenko ◽  
...  

Alpha-amino acid ester hydrolase (EC 3.1.1.43, AEH) is a promising biocatalyst for the production of semi-synthetic -lactam antibiotics, penicillins and cephalosporins. The AEH gene from Xanthomonas rubrilineans (XrAEH) was recently cloned in this laboratory. The three-dimensional structure of XrAEH was simulated using the homology modeling method for rational design experiments. The analysis of the active site was performed, and its structure was specified. The key amino acid residues in the active site - the catalytic triad (Ser175, His341 and Asp308), oxyanion hole (Tyr83 and Tyr176), and carboxylate cluster (carboxylate groups of Asp209, Glu310 and Asp311) - were identified. It was shown that the optimal configuration of residues in the active site occurs with a negative net charge -1 in the carboxylate cluster. Docking of different substrates in the AEH active site was carried out, which allowed us to obtain structures of XrAEH complexes with the ampicillin, amoxicillin, cephalexin, D-phenylglycine, and 4-hydroxy-D-phenylglycine methyl ester. Modeling of XrAEH enzyme complexes with various substrates was used to show the structures for whose synthesis this enzyme will show the highest efficiency.


2005 ◽  
Vol 281 (9) ◽  
pp. 5804-5810 ◽  
Author(s):  
Thomas R. M. Barends ◽  
Jolanda J. Polderman-Tijmes ◽  
Peter A. Jekel ◽  
Christopher Williams ◽  
Gjalt Wybenga ◽  
...  

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