scholarly journals Sequence and Structure-Based Analysis of Specificity Determinants in Eukaryotic Protein Kinases

Cell Reports ◽  
2021 ◽  
Vol 34 (2) ◽  
pp. 108602
Author(s):  
David Bradley ◽  
Cristina Viéitez ◽  
Vinothini Rajeeve ◽  
Joel Selkrig ◽  
Pedro R. Cutillas ◽  
...  
2003 ◽  
Vol 185 (11) ◽  
pp. 3436-3445 ◽  
Author(s):  
Brian H. Lower ◽  
Peter J. Kennelly

ABSTRACT The predicted polypeptide product of open reading frame sso2387 from the archaeon Sulfolobus solfataricus, SsoPK2, displayed several of the sequence features conserved among the members of the “eukaryotic” protein kinase superfamily. sso2387 was cloned, and its polypeptide product was expressed in Escherichia coli. The recombinant protein, rSsoPK2, was recovered in insoluble aggregates that could be dispersed by using high concentrations (5 M) of urea. The solubilized polypeptide displayed the ability to phosphorylate itself as well as several exogenous proteins, including mixed histones, casein, bovine serum albumin, and reduced carboxyamidomethylated and maleylated lysozyme, on serine residues. The source of this activity resided in that portion of the protein displaying homology to the catalytic domain of eukaryotic protein kinases. By use of mass spectrometry, the sites of autophosphorylation were found to be located in two areas, one immediately N terminal to the region corresponding to subdomain I of eukaryotic protein kinases, and the second N terminal to the presumed activation loop located between subdomains VII and VIII. Autophosphorylation of rSsoPK2 could be uncoupled from the phosphorylation of exogenous proteins by manipulation of the temperature or mutagenic alteration of the enzyme. Autophosphorylation was detected only at temperatures ≥60°C, whereas phosphorylation of exogenous proteins was detectable at 37°C. Similarly, replacement of one of the potential sites of autophosphorylation, Ser548, with alanine blocked autophosphorylation but not phosphorylation of an exogenous protein, casein.


2019 ◽  
Vol 40 (11) ◽  
pp. 818-832 ◽  
Author(s):  
Georgi K. Kanev ◽  
Chris de Graaf ◽  
Iwan J.P. de Esch ◽  
Rob Leurs ◽  
Thomas Würdinger ◽  
...  

2016 ◽  
Vol 6 (1) ◽  
pp. e00414 ◽  
Author(s):  
Lena Hoffmann ◽  
Andreas Schummer ◽  
Julia Reimann ◽  
Maria F. Haurat ◽  
Amanda J. Wilson ◽  
...  

2012 ◽  
Vol 367 (1602) ◽  
pp. 2607-2618 ◽  
Author(s):  
Eric Talevich ◽  
Andrew B. Tobin ◽  
Natarajan Kannan ◽  
Christian Doerig

Malaria parasites belong to an ancient lineage that diverged very early from the main branch of eukaryotes. The approximately 90-member plasmodial kinome includes a majority of eukaryotic protein kinases that clearly cluster within the AGC, CMGC, TKL, CaMK and CK1 groups found in yeast, plants and mammals, testifying to the ancient ancestry of these families. However, several hundred millions years of independent evolution, and the specific pressures brought about by first a photosynthetic and then a parasitic lifestyle, led to the emergence of unique features in the plasmodial kinome. These include taxon-restricted kinase families, and unique peculiarities of individual enzymes even when they have homologues in other eukaryotes. Here, we merge essential aspects of all three malaria-related communications that were presented at the Evolution of Protein Phosphorylation meeting, and propose an integrated discussion of the specific features of the parasite's kinome and phosphoproteome.


2012 ◽  
Vol 81 (1) ◽  
pp. 587-613 ◽  
Author(s):  
Jane A. Endicott ◽  
Martin E.M. Noble ◽  
Louise N. Johnson

PLoS Biology ◽  
2016 ◽  
Vol 14 (11) ◽  
pp. e2000127 ◽  
Author(s):  
Hiruy S. Meharena ◽  
Xiaorui Fan ◽  
Lalima G. Ahuja ◽  
Malik M. Keshwani ◽  
Christopher L. McClendon ◽  
...  

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