Trace Information Extraction (TIE): A new approach to extract structural information from traces in geological maps

2019 ◽  
Vol 126 ◽  
pp. 286-300
Author(s):  
Anna Rauch ◽  
Mario Sartori ◽  
Eduardo Rossi ◽  
Pauline Baland ◽  
Sébastien Castelltort
Web Mining ◽  
2011 ◽  
pp. 253-275
Author(s):  
Xiaodi Huang ◽  
Wei Lai

This chapter presents a new approach to clustering graphs, and applies it to Web graph display and navigation. The proposed approach takes advantage of the linkage patterns of graphs, and utilizes an affinity function in conjunction with the k-nearest neighbor. This chapter uses Web graph clustering as an illustrative example, and offers a potentially more applicable method to mine structural information from data sets, with the hope of informing readers of another aspect of data mining and its applications.


Author(s):  
Di Jin ◽  
Xinxin You ◽  
Weihao Li ◽  
Dongxiao He ◽  
Peng Cui ◽  
...  

Recent research on community detection focuses on learning representations of nodes using different network embedding methods, and then feeding them as normal features to clustering algorithms. However, we find that though one may have good results by direct clustering based on such network embedding features, there is ample room for improvement. More seriously, in many real networks, some statisticallysignificant nodes which play pivotal roles are often divided into incorrect communities using network embedding methods. This is because while some distance measures are used to capture the spatial relationship between nodes by embedding, the nodes after mapping to feature vectors are essentially not coupled any more, losing important structural information. To address this problem, we propose a general Markov Random Field (MRF) framework to incorporate coupling in network embedding which allows better detecting network communities. By smartly utilizing properties of MRF, the new framework not only preserves the advantages of network embedding (e.g. low complexity, high parallelizability and applicability for traditional machine learning), but also alleviates its core drawback of inadequate representations of dependencies via making up the missing coupling relationships. Experiments on real networks show that our new approach improves the accuracy of existing embedding methods (e.g. Node2Vec, DeepWalk and MNMF), and corrects most wrongly-divided statistically-significant nodes, which makes network embedding essentially suitable for real community detection applications. The new approach also outperforms other state-of-the-art conventional community detection methods.


2020 ◽  
Author(s):  
C.O.S. Sorzano ◽  
F. de Isidro-Gómez ◽  
E. Fernández-Giménez ◽  
D. Herreros ◽  
S. Marco ◽  
...  

AbstractElectron tomography is a technique to obtain three-dimensional structural information of samples. However, the technique is limited by shifts occurring during acquisition that need to be corrected before the reconstruction process. In 2009, we proposed an approach for post-acquisition alignment of tilt series images. This approach was marker-free, based on patch tracking and integrated in free software. Here, we present improvements to the method to make it more reliable, stable and accurate. In addition, we modified the image formation model underlying the alignment procedure to include different deformations occurring during acquisition. We propose a new way to correct these computed deformations to obtain reconstructions with reduced artifacts. The new approach has demonstrated to improve the quality of the final 3D reconstruction, giving access to better defined structures for different transmission electron tomography methods: resin embedded STEM-tomography and cryo-TEM tomography. The method is freely available in TomoJ software.


2014 ◽  
Vol 70 (a1) ◽  
pp. C1434-C1434
Author(s):  
Briony Yorke ◽  
Arwen Pearson ◽  
Godfrey Beddard ◽  
Robin Owen

Time-resolved crystallography is able to provide four-dimensional structural information about short-lived intermediate states, with near-atomic resolution. This information can be used to elucidate molecular mechanisms relevant to areas such as drug-design, chemical and biological sensors, and energy and information storage. The current state of the art time-resolved experiments can reach picosecond time-resolutions using Laue crystallography but such experiments can only be carried out at a few beamlines worldwide.We have developed a new transform time-resolved method that can be performed using a monochromatic beamline at a synchrotron and still achieve high time-resolution, vastly increasing the accessibility of such experiments. Here we present initial results demonstrating the method.


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