Evolutionary advantage of anti-parallel strand orientation of duplex DNA

Scientific Reports ◽

10.1038/s41598-020-66705-3 ◽

2020 ◽

Vol 10 (1) ◽

Author(s):

Hemachander Subramanian ◽

Robert A. Gatenby

Keyword(s):

Evolutionary Advantage ◽

Strand Orientation

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Duplex DNA and DNA–RNA Hybrids with Parallel Strand Orientation: 2′-Deoxy-2′-fluoroisocytidine, 2′-Deoxy-2′-fluoroisoguanosine, and Canonical Nucleosides with 2′-Fluoro Substituents Cause Unexpected Changes on the Double Helix Stability

The Journal of Organic Chemistry ◽

10.1021/acs.joc.5b00040 ◽

2015 ◽

Vol 80 (6) ◽

pp. 3124-3138 ◽

Author(s):

Sachin A. Ingale ◽

Peter Leonard ◽

Quang Nhat Tran ◽

Frank Seela

Keyword(s):

Double Helix ◽

Strand Orientation ◽

Helix Stability

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Effect of Netropsin on One-electron Oxidation of Duplex DNA¶†

Photochemistry and Photobiology ◽

10.1562/2004-07-26-ra-246.1 ◽

2004 ◽

Vol 80 (3) ◽

pp. 456 ◽

Author(s):

Lezah W. Roberts ◽

Gary B. Schuster

Keyword(s):

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Effect of Netropsin on One Electron Oxidation of Duplex DNA

Photochemistry and Photobiology ◽

10.1562/2004-07-26-ra-246 ◽

2004 ◽

Author(s):

Lezah W. Roberts ◽

Gary B. Schuster

Keyword(s):

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Investigation of Nucleotide-mediated Pyrimidine Dimer Photo-repair in Duplex DNA

10.26226/morressier.5ebd45acffea6f735881aff4 ◽

2020 ◽

Author(s):

Hamza Ben Zeglam

Keyword(s):

Pyrimidine Dimer ◽

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Faculty Opinions recommendation of An evolutionary advantage of haploidy in large yeast populations.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1026288.324975 ◽

2005 ◽

Author(s):

James Fry

Keyword(s):

Evolutionary Advantage

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Faculty Opinions recommendation of ATP hydrolysis Promotes Duplex DNA Release by the RecA Presynaptic Complex.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.726706412.793523673 ◽

2016 ◽

Author(s):

Nei-Li Chan ◽

Hung-Yuan (Peter) Chi

Keyword(s):

Atp Hydrolysis ◽

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Faculty Opinions recommendation of The RNA exosome targets the AID cytidine deaminase to both strands of transcribed duplex DNA substrates.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.8157956.8565054 ◽

2011 ◽

Author(s):

David Schatz

Keyword(s):

Cytidine Deaminase ◽

Dna Substrates ◽

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Purification of the rep protein of Escherichia coli. An ATPase which separates duplex DNA strands in advance of replication.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(17)40835-0 ◽

1978 ◽

Vol 253 (9) ◽

pp. 3292-3297 ◽

Author(s):

J.F. Scott ◽

A. Kornberg

Keyword(s):

Escherichia Coli ◽

Rep Protein ◽

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Homologous pairing in duplex DNA regions and the formation of four-stranded paranemic joints promoted by RecA protein. Effects of gap length and negative superhelicity.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(17)45355-5 ◽

1990 ◽

Vol 265 (34) ◽

pp. 21262-21268

Author(s):

S K Chiu ◽

B C Wong ◽

S A Chow

Keyword(s):

Reca Protein ◽

Homologous Pairing

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Free-Energy Landscape of a pH-Modulated G·C Base Pair Transition from Watson–Crick to Hoogsteen State in Duplex DNA

Journal of Chemical Theory and Computation ◽

10.1021/acs.jctc.0c01330 ◽

2021 ◽

Vol 17 (4) ◽

pp. 2556-2565

Author(s):

Hyeonjun Kim ◽

Changwon Yang ◽

Youngshang Pak

Keyword(s):

Free Energy ◽

Base Pair ◽

Energy Landscape ◽

Free Energy Landscape ◽

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