scholarly journals cOSPREY: A Cloud-Based Distributed Algorithm for Large-Scale Computational Protein Design

2016 ◽  
Vol 23 (9) ◽  
pp. 737-749 ◽  
Author(s):  
Yuchao Pan ◽  
Yuxi Dong ◽  
Jingtian Zhou ◽  
Mark Hallen ◽  
Bruce R. Donald ◽  
...  
Keyword(s):  
Protein Design ◽  
Distributed Algorithm ◽  
Large Scale ◽  
Computational Protein Design

scholarly journals rstoolbox - a Python library for large-scale analysis of computational protein design data and structural bioinformatics

2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Jaume Bonet ◽  
Zander Harteveld ◽  
Fabian Sesterhenn ◽  
Andreas Scheck ◽  
Bruno E. Correia
Keyword(s):  
Protein Design ◽  
Large Scale ◽  
Structural Bioinformatics ◽  
Computational Protein Design ◽  
Scale Analysis ◽  
Design Data ◽  
Large Scale Analysis

A Large Scale Test of Computational Protein Design: Folding and Stability of Nine Completely Redesigned Globular Proteins

2003 ◽  
Vol 332 (2) ◽  
pp. 449-460 ◽  
Author(s):  
Gautam Dantas ◽  
Brian Kuhlman ◽  
David Callender ◽  
Michelle Wong ◽  
David Baker
Keyword(s):  
Protein Design ◽  
Large Scale ◽  
Globular Proteins ◽  
Computational Protein Design ◽  
Scale Test

scholarly journals Discovery of Substrates for a SET Domain Lysine Methyltransferase Predicted by Multistate Computational Protein Design

Structure ◽  
2015 ◽  
Vol 23 (1) ◽  
pp. 206-215 ◽  
Author(s):  
Sylvain Lanouette ◽  
James A. Davey ◽  
Fred Elisma ◽  
Zhibin Ning ◽  
Daniel Figeys ◽  
...  
Keyword(s):  
Protein Design ◽  
Computational Protein Design ◽  
Set Domain ◽  
Lysine Methyltransferase

Electrostatics in computational protein design

2005 ◽  
Vol 9 (6) ◽  
pp. 622-626 ◽  
Author(s):  
Christina L Vizcarra ◽  
Stephen L Mayo
Keyword(s):  
Protein Design ◽  
Computational Protein Design

scholarly journals Pushing the limits of automatic computational protein design: design, expression, and characterization of a large synthetic protein based on a fungal laccase scaffold

2011 ◽  
Vol 5 (1-2) ◽  
pp. 45-58 ◽  
Author(s):  
Doris J. Glykys ◽  
Géza R. Szilvay ◽  
Pablo Tortosa ◽  
María Suárez Diez ◽  
Alfonso Jaramillo ◽  
...  
Keyword(s):  
Protein Design ◽  
Computational Protein Design ◽  
Fungal Laccase ◽  
Synthetic Protein
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