INTERALIGN: interactive alignment editor for distantly related protein sequences

Bioinformatics ◽

10.1093/bioinformatics/bti474 ◽

2005 ◽

Vol 21 (14) ◽

pp. 3166-3167 ◽

Author(s):

O. Pible ◽

G. Imbert ◽

J.-L. Pellequer

Keyword(s):

Protein Sequences ◽

Related Protein

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A Parallel-Processor Implementation of an Algorithm to Delineate Distantly Related Protein Sequences using Conserved Motifs and Neural Networks

Studies in Classification, Data Analysis, and Knowledge Organization - Information Systems and Data Analysis ◽

10.1007/978-3-642-46808-7_37 ◽

1994 ◽

pp. 391-402

Author(s):

Gerhard Vogt ◽

Dmitrij Frishman ◽

Patrick Argos

Keyword(s):

Neural Networks ◽

Protein Sequences ◽

Related Protein ◽

Parallel Processor ◽

Conserved Motifs

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BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases

Nucleic Acids Research ◽

10.1093/nar/gkg535 ◽

2003 ◽

Vol 31 (13) ◽

pp. 3792-3794 ◽

Author(s):

K. Bimpikis

Keyword(s):

Protein Sequences ◽

Related Protein

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Automatic generation of primary sequence patterns from sets of related protein sequences.

Proceedings of the National Academy of Sciences ◽

10.1073/pnas.87.1.118 ◽

1990 ◽

Vol 87 (1) ◽

pp. 118-122 ◽

Author(s):

R. F. Smith ◽

T. F. Smith

Keyword(s):

Protein Sequences ◽

Automatic Generation ◽

Related Protein ◽

Primary Sequence ◽

Sequence Patterns

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A neural network for recognizing distantly related protein sequences

Handbook of Neural Computation ◽

10.1887/0750303123/b365c116 ◽

2004 ◽

Author(s):

Dmitrij Frishman ◽

Patrick Argos

Keyword(s):

Neural Network ◽

Protein Sequences ◽

Related Protein

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Statistical potential-based amino acid similarity matrices for aligning distantly related protein sequences

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.21020 ◽

2006 ◽

Vol 64 (3) ◽

pp. 587-600 ◽

Author(s):

Yen Hock Tan ◽

He Huang ◽

Daisuke Kihara

Keyword(s):

Protein Sequences ◽

Related Protein ◽

Amino Acid Similarity ◽

Statistical Potential ◽

Similarity Matrices

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Rapid detection, classification and accurate alignment of up to a million or more related protein sequences

Bioinformatics ◽

10.1093/bioinformatics/btp573 ◽

2009 ◽

Vol 25 (22) ◽

pp. 3047-3047

Author(s):

A. F. Neuwald

Keyword(s):

Rapid Detection ◽

Protein Sequences ◽

Related Protein

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A distributed algorithm to align distantly related protein sequences using profile analysis

TENCON 2003. Conference on Convergent Technologies for Asia-Pacific Region ◽

10.1109/tencon.2003.1273143 ◽

2004 ◽

Author(s):

H.V. Ganesh ◽

R. Bhuvaneswari ◽

C. Madhusudhanan

Keyword(s):

Distributed Algorithm ◽

Profile Analysis ◽

Protein Sequences ◽

Related Protein

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Searching for distantly related protein sequences in large databases by parallel processing on a transputer machine

Bioinformatics ◽

10.1093/bioinformatics/8.1.49 ◽

1992 ◽

Vol 8 (1) ◽

pp. 49-55 ◽

Author(s):

Gerhard Vogt ◽

Patrick Argos

Keyword(s):

Parallel Processing ◽

Protein Sequences ◽

Related Protein ◽

Large Databases

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Recognition of distantly related protein sequences using conserved motifs and neural networks

Journal of Molecular Biology ◽

10.1016/0022-2836(92)90877-m ◽

1992 ◽

Vol 228 (3) ◽

pp. 951-962 ◽

Author(s):

Dmitrij Frishman ◽

Patrick Argos

Keyword(s):

Neural Networks ◽

Protein Sequences ◽

Related Protein ◽

Conserved Motifs

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A method for making alignments of related protein sequences that share very little similarity; shark interleukin 2 as an example

Immunogenetics ◽

10.1007/s00251-020-01191-5 ◽

2021 ◽

Vol 73 (1) ◽

pp. 35-51 ◽

Author(s):

Johannes M. Dijkstra

Keyword(s):

Interleukin 2 ◽

Protein Sequences ◽

Related Protein

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