DrugE-Rank: improving drug–target interaction prediction of new candidate drugs or targets by ensemble learning to rank

Bioinformatics ◽

10.1093/bioinformatics/btw244 ◽

2016 ◽

Vol 32 (12) ◽

pp. i18-i27 ◽

Author(s):

Qingjun Yuan ◽

Junning Gao ◽

Dongliang Wu ◽

Shihua Zhang ◽

Hiroshi Mamitsuka ◽

...

Keyword(s):

Ensemble Learning ◽

Drug Target ◽

Learning To Rank ◽

Target Interaction ◽

Interaction Prediction

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Drug-target interaction prediction with tree-ensemble learning and output space reconstruction

BMC Bioinformatics ◽

10.1186/s12859-020-3379-z ◽

2020 ◽

Vol 21 (1) ◽

Author(s):

Konstantinos Pliakos ◽

Celine Vens

Keyword(s):

Ensemble Learning ◽

Drug Target ◽

Target Interaction ◽

Interaction Prediction ◽

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NegStacking: drug-target interaction prediction based on ensemble learning and logistic regression

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2020.2968025 ◽

2020 ◽

pp. 1-1

Author(s):

Jie Yang ◽

Song He ◽

Zhongnan Zhang ◽

Xiaochen Bo

Keyword(s):

Logistic Regression ◽

Ensemble Learning ◽

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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Drug-target interaction prediction using ensemble learning and dimensionality reduction

Methods ◽

10.1016/j.ymeth.2017.05.016 ◽

2017 ◽

Vol 129 ◽

pp. 81-88 ◽

Author(s):

Ali Ezzat ◽

Min Wu ◽

Xiao-Li Li ◽

Chee-Keong Kwoh

Keyword(s):

Dimensionality Reduction ◽

Ensemble Learning ◽

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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Ensemble learning algorithm for drug-target interaction prediction

2017 IEEE 7th International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) ◽

10.1109/iccabs.2017.8114292 ◽

2017 ◽

Author(s):

Sudipta Pathak ◽

Xingyu Cai

Keyword(s):

Ensemble Learning ◽

Drug Target ◽

Learning Algorithm ◽

Target Interaction ◽

Interaction Prediction ◽

Ensemble Learning Algorithm

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Drug-target interaction prediction via class imbalance-aware ensemble learning

BMC Bioinformatics ◽

10.1186/s12859-016-1377-y ◽

2016 ◽

Vol 17 (S19) ◽

Author(s):

Ali Ezzat ◽

Min Wu ◽

Xiao-Li Li ◽

Chee-Keong Kwoh

Keyword(s):

Ensemble Learning ◽

Drug Target ◽

Class Imbalance ◽

Target Interaction ◽

Interaction Prediction

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KenDTI: an ensemble model based on network integration and CNN for drug-target interaction prediction

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2021.3074401 ◽

2021 ◽

pp. 1-1

Author(s):

Zhimiao Yu ◽

Jiarui Lu ◽

Yuan Jin ◽

Yang Yang

Keyword(s):

Drug Target ◽

Ensemble Model ◽

Network Integration ◽

Target Interaction ◽

Interaction Prediction ◽

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GanDTI: a Multi-task Neural Network for Drug-Target Interaction Prediction

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2021.107476 ◽

2021 ◽

pp. 107476

Author(s):

Shuyu Wang ◽

Peng Shan ◽

Yuliang Zhao ◽

Lei Zuo

Keyword(s):

Neural Network ◽

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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Drug-Target Interaction Prediction with Graph Regularized Matrix Factorization

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2016.2530062 ◽

2017 ◽

Vol 14 (3) ◽

pp. 646-656 ◽

Author(s):

Ali Ezzat ◽

Peilin Zhao ◽

Min Wu ◽

Xiao-Li Li ◽

Chee-Keong Kwoh

Keyword(s):

Matrix Factorization ◽

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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DeepMGT-DTI: Transformer network incorporating multilayer graph information for Drug–Target interaction prediction

Computers in Biology and Medicine ◽

10.1016/j.compbiomed.2022.105214 ◽

2022 ◽

pp. 105214

Author(s):

Peiliang Zhang ◽

Ziqi Wei ◽

Chao Che ◽

Bo Jin

Keyword(s):

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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Boosting Collaborative Filters for Drug-Target Interaction Prediction

Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications - Lecture Notes in Computer Science ◽

10.1007/978-3-030-13469-3_25 ◽

2019 ◽

pp. 212-220

Author(s):

Cristian Orellana M. ◽

Ricardo Ñanculef ◽

Carlos Valle

Keyword(s):

Drug Target ◽

Target Interaction ◽

Interaction Prediction

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